EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000092088 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-4c15.8
Alias: -
Full Name: si:dkey-4c15.8
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3653 bases
Position: chr22:2247645-2251297
Accession: ZDB-GENE-050420-214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115503	zf-C2H2	PF00096.26	1.8e-13	1	3
ENSDARP00000115503	zf-C2H2	PF00096.26	1.8e-13	2	3
ENSDARP00000115503	zf-C2H2	PF00096.26	1.8e-13	3	3
ENSDARP00000122214	zf-C2H2	PF00096.26	5.3e-11	1	2
ENSDARP00000122214	zf-C2H2	PF00096.26	5.3e-11	2	2
ENSDARP00000122214	zf-met	PF12874.7	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143366	-	565	-	ENSDARP00000115503	181 (aa)	-	A8DZC2
ENSDART00000147852	-	513	XM_021469409	ENSDARP00000122214	108 (aa)	XP_021325084	A8DZA7

Gene Model

Click here to download ENSDARG00000092088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000092088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000092088	si:dkey-4c15.8	100	63.636	ENSDARG00000093562	si:dkey-20i20.7	98	63.636
ENSDARG00000092088	si:dkey-4c15.8	99	69.298	ENSDARG00000115326	znf1002	96	71.176
ENSDARG00000092088	si:dkey-4c15.8	99	68.421	ENSDARG00000101425	si:dkey-1b17.5	92	66.272
ENSDARG00000092088	si:dkey-4c15.8	100	66.087	ENSDARG00000094736	znf1157	97	65.517
ENSDARG00000092088	si:dkey-4c15.8	99	64.035	ENSDARG00000088507	znf982	82	62.838
ENSDARG00000092088	si:dkey-4c15.8	92	52.857	ENSDARG00000077712	zgc:113886	88	52.778
ENSDARG00000092088	si:dkey-4c15.8	99	69.159	ENSDARG00000093672	zgc:171435	99	67.890
ENSDARG00000092088	si:dkey-4c15.8	99	60.000	ENSDARG00000095397	znf1170	99	60.630
ENSDARG00000092088	si:dkey-4c15.8	99	64.602	ENSDARG00000092246	si:dkey-20i20.3	88	66.871
ENSDARG00000092088	si:dkey-4c15.8	99	69.643	ENSDARG00000071725	znf1167	98	56.906
ENSDARG00000092088	si:dkey-4c15.8	99	74.332	ENSDARG00000102053	znf1164	100	73.797
ENSDARG00000092088	si:dkey-4c15.8	97	63.393	ENSDARG00000095455	si:dkey-20i20.10	90	63.576
ENSDARG00000092088	si:dkey-4c15.8	99	60.606	ENSDARG00000077085	zgc:110821	98	56.557
ENSDARG00000092088	si:dkey-4c15.8	99	57.042	ENSDARG00000101885	si:dkey-20i20.11	99	64.706
ENSDARG00000092088	si:dkey-4c15.8	99	61.404	ENSDARG00000014775	zgc:113220	73	55.634
ENSDARG00000092088	si:dkey-4c15.8	99	65.789	ENSDARG00000092027	si:dkey-20i20.9	72	61.350
ENSDARG00000092088	si:dkey-4c15.8	99	56.338	ENSDARG00000071714	znf983	97	62.092
ENSDARG00000092088	si:dkey-4c15.8	99	71.053	ENSDARG00000071833	znf1162	100	69.737
ENSDARG00000092088	si:dkey-4c15.8	99	69.027	ENSDARG00000099618	si:dkey-1b17.6	98	68.485
ENSDARG00000092088	si:dkey-4c15.8	98	63.717	ENSDARG00000098898	si:ch211-255f4.2	98	60.274
ENSDARG00000092088	si:dkey-4c15.8	100	68.085	ENSDARG00000112141	znf1169	94	64.894
ENSDARG00000092088	si:dkey-4c15.8	99	63.158	ENSDARG00000093875	zgc:174224	81	58.710
ENSDARG00000092088	si:dkey-4c15.8	99	71.053	ENSDARG00000095704	si:dkey-4c15.13	96	71.552
ENSDARG00000092088	si:dkey-4c15.8	100	77.128	ENSDARG00000100361	znf1174	100	77.128
ENSDARG00000092088	si:dkey-4c15.8	99	63.158	ENSDARG00000094343	si:dkey-20i20.8	85	57.055