EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000092246 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.3
Alias: -
Full Name: si:dkey-20i20.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2409 bases
Position: chr22:2819613-2822021
Accession: ZDB-GENE-060503-623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120881	zf-C2H2	PF00096.26	1.7e-22	1	4
ENSDARP00000120881	zf-C2H2	PF00096.26	1.7e-22	2	4
ENSDARP00000120881	zf-C2H2	PF00096.26	1.7e-22	3	4
ENSDARP00000120881	zf-C2H2	PF00096.26	1.7e-22	4	4
ENSDARP00000120881	zf-met	PF12874.7	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000131234	-	915	-	ENSDARP00000120881	228 (aa)	-	A3KPU5

Gene Model

Click here to download ENSDARG00000092246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000092246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000092246	si:dkey-20i20.3	75	71.512	ENSDARG00000094343	si:dkey-20i20.8	83	71.512
ENSDARG00000092246	si:dkey-20i20.3	85	88.718	ENSDARG00000071714	znf983	100	88.718
ENSDARG00000092246	si:dkey-20i20.3	71	57.600	ENSDARG00000077085	zgc:110821	92	60.345
ENSDARG00000092246	si:dkey-20i20.3	89	61.688	ENSDARG00000100544	zgc:173486	96	63.087
ENSDARG00000092246	si:dkey-20i20.3	83	58.647	ENSDARG00000093672	zgc:171435	100	63.793
ENSDARG00000092246	si:dkey-20i20.3	87	70.930	ENSDARG00000092027	si:dkey-20i20.9	81	69.061
ENSDARG00000092246	si:dkey-20i20.3	75	54.696	ENSDARG00000113666	znf1173	82	58.108
ENSDARG00000092246	si:dkey-20i20.3	87	53.000	ENSDARG00000088507	znf982	99	54.098
ENSDARG00000092246	si:dkey-20i20.3	88	66.871	ENSDARG00000092088	si:dkey-4c15.8	99	64.602
ENSDARG00000092246	si:dkey-20i20.3	84	59.375	ENSDARG00000094736	znf1157	99	68.908
ENSDARG00000092246	si:dkey-20i20.3	84	69.634	ENSDARG00000094309	si:ch73-92e7.6	100	69.634
ENSDARG00000092246	si:dkey-20i20.3	83	60.440	ENSDARG00000103827	znf1144	99	63.043
ENSDARG00000092246	si:dkey-20i20.3	84	83.420	ENSDARG00000095455	si:dkey-20i20.10	93	83.420
ENSDARG00000092246	si:dkey-20i20.3	83	54.545	ENSDARG00000111899	zgc:171435	89	58.247
ENSDARG00000092246	si:dkey-20i20.3	84	50.917	ENSDARG00000071833	znf1162	100	65.132
ENSDARG00000092246	si:dkey-20i20.3	64	64.189	ENSDARG00000093875	zgc:174224	78	64.189
ENSDARG00000092246	si:dkey-20i20.3	89	68.098	ENSDARG00000102053	znf1164	100	65.541
ENSDARG00000092246	si:dkey-20i20.3	89	53.247	ENSDARG00000112141	znf1169	86	53.247
ENSDARG00000092246	si:dkey-20i20.3	85	83.590	ENSDARG00000101885	si:dkey-20i20.11	100	83.590
ENSDARG00000092246	si:dkey-20i20.3	84	51.515	ENSDARG00000078159	zgc:175284	100	59.406
ENSDARG00000092246	si:dkey-20i20.3	89	54.936	ENSDARG00000115326	znf1002	94	54.936
ENSDARG00000092246	si:dkey-20i20.3	88	62.286	ENSDARG00000101425	si:dkey-1b17.5	88	62.286
ENSDARG00000092246	si:dkey-20i20.3	84	53.543	ENSDARG00000100587	zgc:113886	100	45.223
ENSDARG00000092246	si:dkey-20i20.3	90	84.390	ENSDARG00000093562	si:dkey-20i20.7	90	84.390
ENSDARG00000092246	si:dkey-20i20.3	88	60.870	ENSDARG00000099618	si:dkey-1b17.6	93	60.870
ENSDARG00000092246	si:dkey-20i20.3	83	64.706	ENSDARG00000095704	si:dkey-4c15.13	97	68.376
ENSDARG00000092246	si:dkey-20i20.3	63	58.904	ENSDARG00000098898	si:ch211-255f4.2	98	58.904
ENSDARG00000092246	si:dkey-20i20.3	83	56.771	ENSDARG00000071725	znf1167	95	56.771
ENSDARG00000092246	si:dkey-20i20.3	76	49.425	ENSDARG00000077712	zgc:113886	96	48.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000092246	si:dkey-20i20.3	60	45.763	ENSATEG00000008667	-	61	45.763	Anabas_testudineus
ENSDARG00000092246	si:dkey-20i20.3	58	53.782	ENSKMAG00000009563	-	73	53.782	Kryptolebias_marmoratus
ENSDARG00000092246	si:dkey-20i20.3	84	55.455	ENSMZEG00005027943	-	71	45.263	Maylandia_zebra
ENSDARG00000092246	si:dkey-20i20.3	60	48.276	ENSORLG00020019341	-	75	60.000	Oryzias_latipes_hni
ENSDARG00000092246	si:dkey-20i20.3	83	50.667	ENSSDUG00000008682	-	99	50.667	Seriola_dumerili