EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000092605 (Gene tree)
Gene ID: 793476
Gene Symbol: znf1003
Alias: zgc:174712
Full Name: zinc finger protein 1003
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5369 bases
Position: chr22:2524615-2529983
Accession: ZDB-GENE-080219-42
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	1	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	2	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	3	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	4	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	5	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	6	7
ENSDARP00000115249	zf-C2H2	PF00096.26	1.5e-42	7	7
ENSDARP00000115249	zf-met	PF12874.7	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000134277	-	1644	XM_017353384	ENSDARP00000115249	336 (aa)	XP_017208873	B8JM00

Gene Model

Click here to download ENSDARG00000092605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000092605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000092605	znf1003	71	54.955	ENSDARG00000098923	zgc:173577	92	55.952
ENSDARG00000092605	znf1003	79	47.426	ENSDARG00000116814	CU570894.2	100	55.729
ENSDARG00000092605	znf1003	92	58.333	ENSDARG00000100882	znf1154	91	58.333
ENSDARG00000092605	znf1003	95	46.667	ENSDARG00000101044	si:ch73-138e16.6	88	60.714
ENSDARG00000092605	znf1003	88	51.220	ENSDARG00000073821	znf1177	89	50.181
ENSDARG00000092605	znf1003	94	59.302	ENSDARG00000088507	znf982	100	60.714
ENSDARG00000092605	znf1003	77	52.066	ENSDARG00000101562	znf1014	98	52.101
ENSDARG00000092605	znf1003	78	54.545	ENSDARG00000090740	zmp:0000001003	100	54.545
ENSDARG00000092605	znf1003	94	51.376	ENSDARG00000109703	FO834825.1	98	51.376
ENSDARG00000092605	znf1003	90	59.227	ENSDARG00000099618	si:dkey-1b17.6	99	59.227
ENSDARG00000092605	znf1003	78	60.099	ENSDARG00000103777	znf1001	99	60.099
ENSDARG00000092605	znf1003	92	60.256	ENSDARG00000100361	znf1174	89	59.615
ENSDARG00000092605	znf1003	95	49.462	ENSDARG00000078159	zgc:175284	100	48.936
ENSDARG00000092605	znf1003	75	62.500	ENSDARG00000077712	zgc:113886	96	60.417
ENSDARG00000092605	znf1003	92	54.093	ENSDARG00000111899	zgc:171435	89	54.093
ENSDARG00000092605	znf1003	94	50.556	ENSDARG00000099890	CU207221.2	99	50.794
ENSDARG00000092605	znf1003	79	61.538	ENSDARG00000106808	CU856622.1	100	61.538
ENSDARG00000092605	znf1003	76	57.207	ENSDARG00000103530	zgc:113102	93	57.207
ENSDARG00000092605	znf1003	95	51.506	ENSDARG00000100587	zgc:113886	100	53.488
ENSDARG00000092605	znf1003	94	68.786	ENSDARG00000103827	znf1144	98	78.571
ENSDARG00000092605	znf1003	93	54.984	ENSDARG00000071790	znf1153	90	54.984
ENSDARG00000092605	znf1003	93	54.603	ENSDARG00000104065	znf1154	95	50.534
ENSDARG00000092605	znf1003	74	55.856	ENSDARG00000099172	BX000701.1	86	55.856
ENSDARG00000092605	znf1003	93	56.226	ENSDARG00000115326	znf1002	90	54.340
ENSDARG00000092605	znf1003	94	60.894	ENSDARG00000102678	znf1181	89	50.794
ENSDARG00000092605	znf1003	75	63.291	ENSDARG00000088051	AL935044.1	99	63.291
ENSDARG00000092605	znf1003	95	49.062	ENSDARG00000098613	si:dkey-15h8.16	93	49.062
ENSDARG00000092605	znf1003	93	59.664	ENSDARG00000101694	znf1184	96	59.664
ENSDARG00000092605	znf1003	94	58.261	ENSDARG00000053165	zgc:113377	100	58.261
ENSDARG00000092605	znf1003	77	52.610	ENSDARG00000106565	CABZ01066720.1	97	52.610
ENSDARG00000092605	znf1003	95	53.125	ENSDARG00000093378	si:ch211-235i11.5	99	52.500
ENSDARG00000092605	znf1003	92	61.084	ENSDARG00000071833	znf1162	100	61.084
ENSDARG00000092605	znf1003	94	60.591	ENSDARG00000094736	znf1157	100	65.517
ENSDARG00000092605	znf1003	94	53.425	ENSDARG00000103954	znf1152	97	67.172
ENSDARG00000092605	znf1003	93	53.521	ENSDARG00000112141	znf1169	85	53.333
ENSDARG00000092605	znf1003	67	58.986	ENSDARG00000078814	si:dkey-34m19.3	77	58.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000092605	znf1003	70	48.276	ENSACIG00000008886	znf1164	81	48.276	Amphilophus_citrinellus
ENSDARG00000092605	znf1003	73	44.503	ENSACIG00000007882	-	80	44.503	Amphilophus_citrinellus
ENSDARG00000092605	znf1003	94	46.111	ENSACIG00000000360	si:ch211-241b2.1	97	46.111	Amphilophus_citrinellus
ENSDARG00000092605	znf1003	91	46.957	ENSATEG00000008667	-	61	46.957	Anabas_testudineus
ENSDARG00000092605	znf1003	83	41.727	ENSATEG00000008683	si:ch211-241b2.1	71	51.309	Anabas_testudineus
ENSDARG00000092605	znf1003	71	47.887	ENSACLG00000017449	-	58	47.887	Astatotilapia_calliptera
ENSDARG00000092605	znf1003	70	44.643	ENSACLG00000000521	-	97	44.643	Astatotilapia_calliptera
ENSDARG00000092605	znf1003	90	47.651	ENSACLG00000024670	-	94	52.695	Astatotilapia_calliptera
ENSDARG00000092605	znf1003	71	52.941	ENSAMXG00000041650	-	85	52.941	Astyanax_mexicanus
ENSDARG00000092605	znf1003	88	42.690	ENSCSEG00000015585	-	81	42.690	Cynoglossus_semilaevis
ENSDARG00000092605	znf1003	73	45.729	ENSHBUG00000009953	-	90	45.729	Haplochromis_burtoni
ENSDARG00000092605	znf1003	73	43.290	ENSMZEG00005025568	-	79	43.290	Maylandia_zebra
ENSDARG00000092605	znf1003	70	37.131	ENSMZEG00005005162	-	80	41.758	Maylandia_zebra
ENSDARG00000092605	znf1003	94	47.468	ENSMZEG00005026470	-	57	47.619	Maylandia_zebra
ENSDARG00000092605	znf1003	90	53.143	ENSMZEG00005027943	-	97	49.474	Maylandia_zebra
ENSDARG00000092605	znf1003	71	39.316	ENSONIG00000006585	-	99	39.316	Oreochromis_niloticus
ENSDARG00000092605	znf1003	74	45.342	ENSONIG00000013908	-	100	45.342	Oreochromis_niloticus
ENSDARG00000092605	znf1003	71	46.429	ENSPFOG00000011766	-	100	46.429	Poecilia_formosa
ENSDARG00000092605	znf1003	70	44.156	ENSPNYG00000024183	zgc:173577	98	44.156	Pundamilia_nyererei
ENSDARG00000092605	znf1003	92	57.692	ENSSDUG00000008682	-	99	57.692	Seriola_dumerili
ENSDARG00000092605	znf1003	85	33.803	ENSSPAG00000009426	-	69	33.333	Stegastes_partitus
ENSDARG00000092605	znf1003	70	45.604	ENSTNIG00000000277	-	93	45.604	Tetraodon_nigroviridis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function