EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000093476 (Gene tree)
Gene ID: 559062
Gene Symbol: si:dkey-175d9.2
Alias: -
Full Name: si:dkey-175d9.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 14109 bases
Position: chr3:4239106-4253214
Accession: ZDB-GENE-131119-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128548	MMR_HSR1	PF01926.23	7.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000155807	-	2831	XM_021474824	ENSDARP00000128548	922 (aa)	XP_021330499	X1WE97

Gene Model

Click here to download ENSDARG00000093476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000093476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000093476	si:dkey-175d9.2	88	82.292	ENSDARG00000078832	si:dkey-73p2.3	70	80.403
ENSDARG00000093476	si:dkey-175d9.2	51	46.570	ENSDARG00000076573	si:dkey-88j15.3	94	42.784
ENSDARG00000093476	si:dkey-175d9.2	99	81.760	ENSDARG00000079245	si:dkey-73p2.2	99	81.760
ENSDARG00000093476	si:dkey-175d9.2	53	30.671	ENSDARG00000099678	BX569789.1	72	32.489
ENSDARG00000093476	si:dkey-175d9.2	54	31.319	ENSDARG00000087012	BX004816.2	69	32.601

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000093476	si:dkey-175d9.2	52	42.759	ENSAPOG00000006177	-	59	43.333	Acanthochromis_polyacanthus
ENSDARG00000093476	si:dkey-175d9.2	52	38.462	ENSAPOG00000006169	-	82	40.397	Acanthochromis_polyacanthus
ENSDARG00000093476	si:dkey-175d9.2	53	43.131	ENSAOCG00000008525	-	85	40.514	Amphiprion_ocellaris
ENSDARG00000093476	si:dkey-175d9.2	51	37.209	ENSAMXG00000036272	-	89	37.770	Astyanax_mexicanus
ENSDARG00000093476	si:dkey-175d9.2	50	41.007	ENSCVAG00000007463	-	73	45.946	Cyprinodon_variegatus
ENSDARG00000093476	si:dkey-175d9.2	51	43.678	ENSFHEG00000015163	-	84	47.867	Fundulus_heteroclitus
ENSDARG00000093476	si:dkey-175d9.2	50	37.190	ENSGAFG00000013275	-	77	38.117	Gambusia_affinis
ENSDARG00000093476	si:dkey-175d9.2	50	39.068	ENSLBEG00000012493	-	72	40.000	Labrus_bergylta
ENSDARG00000093476	si:dkey-175d9.2	52	39.474	ENSLBEG00000020152	-	96	37.000	Labrus_bergylta
ENSDARG00000093476	si:dkey-175d9.2	50	39.427	ENSLBEG00000025779	-	69	40.426	Labrus_bergylta
ENSDARG00000093476	si:dkey-175d9.2	50	39.068	ENSLBEG00000025797	-	71	41.784	Labrus_bergylta
ENSDARG00000093476	si:dkey-175d9.2	50	44.186	ENSMAMG00000015996	-	84	38.170	Mastacembelus_armatus
ENSDARG00000093476	si:dkey-175d9.2	53	43.110	ENSORLG00000010984	si:ch211-113e8.5	68	50.000	Oryzias_latipes
ENSDARG00000093476	si:dkey-175d9.2	53	42.756	ENSORLG00020021874	si:ch211-113e8.5	79	43.396	Oryzias_latipes_hni
ENSDARG00000093476	si:dkey-175d9.2	53	43.110	ENSORLG00015019729	si:ch211-113e8.5	79	42.925	Oryzias_latipes_hsok
ENSDARG00000093476	si:dkey-175d9.2	51	37.218	ENSOMEG00000020554	-	71	40.465	Oryzias_melastigma
ENSDARG00000093476	si:dkey-175d9.2	50	38.652	ENSOMEG00000018491	-	74	44.860	Oryzias_melastigma
ENSDARG00000093476	si:dkey-175d9.2	52	40.199	ENSPFOG00000001141	-	89	43.353	Poecilia_formosa
ENSDARG00000093476	si:dkey-175d9.2	51	41.000	ENSPFOG00000024153	-	83	38.835	Poecilia_formosa
ENSDARG00000093476	si:dkey-175d9.2	50	43.446	ENSPFOG00000010867	-	67	47.000	Poecilia_formosa
ENSDARG00000093476	si:dkey-175d9.2	51	42.160	ENSPLAG00000017835	-	90	47.170	Poecilia_latipinna
ENSDARG00000093476	si:dkey-175d9.2	50	38.511	ENSPMEG00000005464	-	90	37.942	Poecilia_mexicana
ENSDARG00000093476	si:dkey-175d9.2	50	44.800	ENSPMEG00000011042	-	91	48.815	Poecilia_mexicana
ENSDARG00000093476	si:dkey-175d9.2	51	39.785	ENSPMEG00000002161	-	97	37.097	Poecilia_mexicana
ENSDARG00000093476	si:dkey-175d9.2	55	36.585	ENSPREG00000009303	-	90	36.050	Poecilia_reticulata
ENSDARG00000093476	si:dkey-175d9.2	50	38.866	ENSPREG00000000360	-	97	41.905	Poecilia_reticulata
ENSDARG00000093476	si:dkey-175d9.2	50	41.549	ENSPREG00000022613	-	72	39.274	Poecilia_reticulata
ENSDARG00000093476	si:dkey-175d9.2	52	39.414	ENSPREG00000009447	-	92	40.741	Poecilia_reticulata
ENSDARG00000093476	si:dkey-175d9.2	52	41.751	ENSSFOG00015007857	-	91	41.751	Scleropages_formosus
ENSDARG00000093476	si:dkey-175d9.2	51	40.569	ENSSLDG00000011176	-	87	47.085	Seriola_lalandi_dorsalis
ENSDARG00000093476	si:dkey-175d9.2	54	40.125	ENSSPAG00000002408	-	65	46.414	Stegastes_partitus
ENSDARG00000093476	si:dkey-175d9.2	52	41.639	ENSSPAG00000002455	-	88	37.245	Stegastes_partitus
ENSDARG00000093476	si:dkey-175d9.2	53	40.523	ENSXCOG00000019571	-	93	39.423	Xiphophorus_couchianus
ENSDARG00000093476	si:dkey-175d9.2	51	41.781	ENSXMAG00000026906	-	91	39.441	Xiphophorus_maculatus
ENSDARG00000093476	si:dkey-175d9.2	51	39.934	ENSXMAG00000025992	-	81	40.068	Xiphophorus_maculatus
ENSDARG00000093476	si:dkey-175d9.2	53	40.141	ENSXMAG00000022271	-	93	39.446	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function