EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000093562 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.7
Alias: -
Full Name: si:dkey-20i20.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5336 bases
Position: chr22:2801464-2806799
Accession: ZDB-GENE-060503-906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113064	zf-C2H2	PF00096.26	1.8e-26	1	4
ENSDARP00000113064	zf-C2H2	PF00096.26	1.8e-26	2	4
ENSDARP00000113064	zf-C2H2	PF00096.26	1.8e-26	3	4
ENSDARP00000113064	zf-C2H2	PF00096.26	1.8e-26	4	4
ENSDARP00000113064	zf-met	PF12874.7	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000132419	-	899	-	ENSDARP00000113064	300 (aa)	-	F1R079

Gene Model

Click here to download ENSDARG00000093562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000093562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000093562	si:dkey-20i20.7	92	58.642	ENSDARG00000100544	zgc:173486	100	86.486
ENSDARG00000093562	si:dkey-20i20.7	77	66.667	ENSDARG00000113666	znf1173	82	66.667
ENSDARG00000093562	si:dkey-20i20.7	86	56.034	ENSDARG00000078159	zgc:175284	100	56.436
ENSDARG00000093562	si:dkey-20i20.7	86	53.676	ENSDARG00000100587	zgc:113886	100	43.226
ENSDARG00000093562	si:dkey-20i20.7	96	59.701	ENSDARG00000099618	si:dkey-1b17.6	83	53.584
ENSDARG00000093562	si:dkey-20i20.7	86	63.235	ENSDARG00000094309	si:ch73-92e7.6	100	63.235
ENSDARG00000093562	si:dkey-20i20.7	86	50.000	ENSDARG00000094736	znf1157	99	68.908
ENSDARG00000093562	si:dkey-20i20.7	86	57.600	ENSDARG00000077085	zgc:110821	98	64.062
ENSDARG00000093562	si:dkey-20i20.7	89	73.529	ENSDARG00000094343	si:dkey-20i20.8	88	73.529
ENSDARG00000093562	si:dkey-20i20.7	78	49.038	ENSDARG00000077712	zgc:113886	96	45.977
ENSDARG00000093562	si:dkey-20i20.7	86	54.688	ENSDARG00000088507	znf982	98	54.688
ENSDARG00000093562	si:dkey-20i20.7	98	63.636	ENSDARG00000092088	si:dkey-4c15.8	100	63.636
ENSDARG00000093562	si:dkey-20i20.7	89	62.667	ENSDARG00000093875	zgc:174224	94	61.272
ENSDARG00000093562	si:dkey-20i20.7	99	83.333	ENSDARG00000092027	si:dkey-20i20.9	99	76.471
ENSDARG00000093562	si:dkey-20i20.7	90	84.390	ENSDARG00000092246	si:dkey-20i20.3	90	84.390
ENSDARG00000093562	si:dkey-20i20.7	89	57.971	ENSDARG00000115326	znf1002	94	57.971
ENSDARG00000093562	si:dkey-20i20.7	85	84.058	ENSDARG00000095455	si:dkey-20i20.10	99	84.058
ENSDARG00000093562	si:dkey-20i20.7	86	85.385	ENSDARG00000071714	znf983	100	86.667
ENSDARG00000093562	si:dkey-20i20.7	95	61.856	ENSDARG00000101425	si:dkey-1b17.5	98	62.500
ENSDARG00000093562	si:dkey-20i20.7	98	63.768	ENSDARG00000098613	si:dkey-15h8.16	98	63.768
ENSDARG00000093562	si:dkey-20i20.7	86	45.070	ENSDARG00000071833	znf1162	100	61.184
ENSDARG00000093562	si:dkey-20i20.7	86	84.615	ENSDARG00000101885	si:dkey-20i20.11	100	84.615
ENSDARG00000093562	si:dkey-20i20.7	84	60.870	ENSDARG00000071725	znf1167	99	60.870
ENSDARG00000093562	si:dkey-20i20.7	98	54.181	ENSDARG00000100361	znf1174	100	54.181
ENSDARG00000093562	si:dkey-20i20.7	99	50.847	ENSDARG00000112141	znf1169	95	52.174
ENSDARG00000093562	si:dkey-20i20.7	98	67.380	ENSDARG00000102053	znf1164	100	67.380
ENSDARG00000093562	si:dkey-20i20.7	98	59.420	ENSDARG00000102678	znf1181	98	59.420
ENSDARG00000093562	si:dkey-20i20.7	99	57.143	ENSDARG00000071790	znf1153	99	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000093562	si:dkey-20i20.7	68	49.265	ENSKMAG00000009563	-	95	43.293	Kryptolebias_marmoratus
ENSDARG00000093562	si:dkey-20i20.7	84	54.622	ENSMZEG00005027943	-	68	50.617	Maylandia_zebra
ENSDARG00000093562	si:dkey-20i20.7	86	50.667	ENSSDUG00000008682	-	99	50.667	Seriola_dumerili