EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000093875 (Gene tree)
Gene ID: -
Gene Symbol: zgc:174224
Alias: -
Full Name: zgc:174224
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6401 bases
Position: chr22:2345752-2352152
Accession: ZDB-GENE-071004-118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000118684	zf-C2H2	PF00096.26	9.3e-16	1	3
ENSDARP00000118684	zf-C2H2	PF00096.26	9.3e-16	2	3
ENSDARP00000118684	zf-C2H2	PF00096.26	9.3e-16	3	3
ENSDARP00000118684	zf-met	PF12874.7	3.1e-05	1	2
ENSDARP00000118684	zf-met	PF12874.7	3.1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143687	-	564	-	ENSDARP00000118684	187 (aa)	-	A8DZB7

Gene Model

Click here to download ENSDARG00000093875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000093875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000093875	zgc:174224	73	60.145	ENSDARG00000101885	si:dkey-20i20.11	70	61.871
ENSDARG00000093875	zgc:174224	79	60.870	ENSDARG00000071714	znf983	70	62.590
ENSDARG00000093875	zgc:174224	79	65.306	ENSDARG00000088507	znf982	76	55.634
ENSDARG00000093875	zgc:174224	73	86.111	ENSDARG00000100544	zgc:173486	98	96.667
ENSDARG00000093875	zgc:174224	78	58.784	ENSDARG00000014775	zgc:113220	77	61.745
ENSDARG00000093875	zgc:174224	71	63.636	ENSDARG00000093672	zgc:171435	100	64.957
ENSDARG00000093875	zgc:174224	89	71.023	ENSDARG00000099618	si:dkey-1b17.6	93	73.620
ENSDARG00000093875	zgc:174224	78	64.189	ENSDARG00000092246	si:dkey-20i20.3	64	64.189
ENSDARG00000093875	zgc:174224	78	47.291	ENSDARG00000095455	si:dkey-20i20.10	98	57.664
ENSDARG00000093875	zgc:174224	73	57.471	ENSDARG00000100587	zgc:113886	100	44.371
ENSDARG00000093875	zgc:174224	88	63.584	ENSDARG00000102053	znf1164	100	67.826
ENSDARG00000093875	zgc:174224	73	64.539	ENSDARG00000095704	si:dkey-4c15.13	100	66.667
ENSDARG00000093875	zgc:174224	74	65.942	ENSDARG00000094309	si:ch73-92e7.6	97	65.942
ENSDARG00000093875	zgc:174224	67	65.116	ENSDARG00000113666	znf1173	80	65.116
ENSDARG00000093875	zgc:174224	76	65.354	ENSDARG00000077085	zgc:110821	93	70.248
ENSDARG00000093875	zgc:174224	80	60.526	ENSDARG00000115326	znf1002	94	62.500
ENSDARG00000093875	zgc:174224	83	70.440	ENSDARG00000071833	znf1162	92	62.857
ENSDARG00000093875	zgc:174224	89	55.952	ENSDARG00000094343	si:dkey-20i20.8	85	61.224
ENSDARG00000093875	zgc:174224	68	65.909	ENSDARG00000095397	znf1170	100	68.182
ENSDARG00000093875	zgc:174224	85	63.095	ENSDARG00000101425	si:dkey-1b17.5	76	64.667
ENSDARG00000093875	zgc:174224	94	61.272	ENSDARG00000093562	si:dkey-20i20.7	89	62.667
ENSDARG00000093875	zgc:174224	78	62.416	ENSDARG00000098898	si:ch211-255f4.2	100	62.416
ENSDARG00000093875	zgc:174224	79	66.887	ENSDARG00000078159	zgc:175284	100	69.536
ENSDARG00000093875	zgc:174224	75	65.385	ENSDARG00000094736	znf1157	95	70.175
ENSDARG00000093875	zgc:174224	85	61.250	ENSDARG00000092027	si:dkey-20i20.9	66	65.101
ENSDARG00000093875	zgc:174224	73	59.286	ENSDARG00000071725	znf1167	99	61.429
ENSDARG00000093875	zgc:174224	81	58.710	ENSDARG00000092088	si:dkey-4c15.8	99	63.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000093875	zgc:174224	72	44.286	ENSSDUG00000008682	-	96	43.571	Seriola_dumerili