EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000094010 (Gene tree)
Gene ID: 559432
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1 RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 44683 bases
Position: chr20:34343649-34388331
Accession: ZDB-GENE-041015-373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113234	PIN_4	PF13638.6	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000136591	-	639	-	ENSDARP00000117145	169 (aa)	-	Q5RG87
ENSDART00000133593	-	3917	XM_009294796	ENSDARP00000113234	954 (aa)	XP_009293071	Q5RG89

Gene Model

Click here to download ENSDARG00000094010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000094010	swt1	69	35.193	ENSG00000116668	SWT1	73	35.328	Homo_sapiens
ENSDARG00000094010	swt1	57	45.407	ENSAPOG00000014897	-	59	45.927	Acanthochromis_polyacanthus
ENSDARG00000094010	swt1	69	36.628	ENSAMEG00000013585	SWT1	62	40.000	Ailuropoda_melanoleuca
ENSDARG00000094010	swt1	56	46.690	ENSAOCG00000013932	swt1	59	46.690	Amphiprion_ocellaris
ENSDARG00000094010	swt1	56	46.516	ENSAPEG00000009613	-	59	46.516	Amphiprion_percula
ENSDARG00000094010	swt1	56	50.265	ENSATEG00000018946	swt1	57	50.265	Anabas_testudineus
ENSDARG00000094010	swt1	56	40.320	ENSAPLG00000008607	SWT1	76	40.320	Anas_platyrhynchos
ENSDARG00000094010	swt1	56	36.460	ENSACAG00000002276	SWT1	65	36.460	Anolis_carolinensis
ENSDARG00000094010	swt1	69	35.662	ENSANAG00000027068	SWT1	72	35.651	Aotus_nancymaae
ENSDARG00000094010	swt1	66	42.216	ENSACLG00000009742	swt1	67	47.786	Astatotilapia_calliptera
ENSDARG00000094010	swt1	80	49.176	ENSAMXG00000010971	swt1	80	49.239	Astyanax_mexicanus
ENSDARG00000094010	swt1	57	38.354	ENSCJAG00000005544	SWT1	73	34.632	Callithrix_jacchus
ENSDARG00000094010	swt1	57	38.947	ENSCAFG00000013543	SWT1	61	39.106	Canis_familiaris
ENSDARG00000094010	swt1	57	38.947	ENSCAFG00020015648	SWT1	66	38.947	Canis_lupus_dingo
ENSDARG00000094010	swt1	58	38.527	ENSCHIG00000023511	SWT1	97	38.527	Capra_hircus
ENSDARG00000094010	swt1	58	38.699	ENSTSYG00000010470	SWT1	63	38.699	Carlito_syrichta
ENSDARG00000094010	swt1	51	39.155	ENSCPOG00000014251	SWT1	63	39.155	Cavia_porcellus
ENSDARG00000094010	swt1	69	35.517	ENSCCAG00000033926	SWT1	72	35.799	Cebus_capucinus
ENSDARG00000094010	swt1	69	35.269	ENSCATG00000042210	SWT1	97	37.973	Cercocebus_atys
ENSDARG00000094010	swt1	57	38.832	ENSCLAG00000013959	SWT1	63	38.821	Chinchilla_lanigera
ENSDARG00000094010	swt1	69	35.123	ENSCSAG00000012895	SWT1	73	34.978	Chlorocebus_sabaeus
ENSDARG00000094010	swt1	58	40.886	ENSCPBG00000015691	SWT1	63	40.886	Chrysemys_picta_bellii
ENSDARG00000094010	swt1	69	35.151	ENSCANG00000032207	SWT1	97	38.062	Colobus_angolensis_palliatus
ENSDARG00000094010	swt1	69	36.052	ENSCGRG00001022955	Swt1	68	38.308	Cricetulus_griseus_chok1gshd
ENSDARG00000094010	swt1	69	36.338	ENSCGRG00000010224	Swt1	66	38.308	Cricetulus_griseus_crigri
ENSDARG00000094010	swt1	56	45.550	ENSCSEG00000017352	swt1	74	45.724	Cynoglossus_semilaevis
ENSDARG00000094010	swt1	61	35.237	ENSDNOG00000005254	SWT1	72	35.563	Dasypus_novemcinctus
ENSDARG00000094010	swt1	57	39.478	ENSDORG00000010531	Swt1	67	39.652	Dipodomys_ordii
ENSDARG00000094010	swt1	57	38.045	ENSEASG00005005530	SWT1	66	38.045	Equus_asinus_asinus
ENSDARG00000094010	swt1	57	37.390	ENSECAG00000012085	SWT1	65	37.390	Equus_caballus
ENSDARG00000094010	swt1	57	52.257	ENSELUG00000020565	swt1	56	52.604	Esox_lucius
ENSDARG00000094010	swt1	69	35.269	ENSFCAG00000011286	SWT1	74	35.269	Felis_catus
ENSDARG00000094010	swt1	56	40.845	ENSFALG00000003206	SWT1	63	40.845	Ficedula_albicollis
ENSDARG00000094010	swt1	57	39.688	ENSFDAG00000007569	SWT1	63	39.688	Fukomys_damarensis
ENSDARG00000094010	swt1	55	40.357	ENSGALG00000034230	SWT1	62	40.357	Gallus_gallus
ENSDARG00000094010	swt1	56	45.927	ENSGAFG00000007803	-	59	46.007	Gambusia_affinis
ENSDARG00000094010	swt1	58	39.547	ENSGAGG00000025050	SWT1	98	39.547	Gopherus_agassizii
ENSDARG00000094010	swt1	51	39.376	ENSGGOG00000041167	-	92	39.376	Gorilla_gorilla
ENSDARG00000094010	swt1	69	42.446	ENSHBUG00000006188	swt1	67	47.803	Haplochromis_burtoni
ENSDARG00000094010	swt1	68	37.281	ENSHGLG00000006542	SWT1	65	40.669	Heterocephalus_glaber_female
ENSDARG00000094010	swt1	68	37.135	ENSHGLG00100014408	SWT1	63	40.317	Heterocephalus_glaber_male
ENSDARG00000094010	swt1	82	49.127	ENSIPUG00000009113	-	82	47.877	Ictalurus_punctatus
ENSDARG00000094010	swt1	69	36.377	ENSSTOG00000010356	SWT1	63	39.199	Ictidomys_tridecemlineatus
ENSDARG00000094010	swt1	57	38.569	ENSJJAG00000015927	Swt1	65	38.569	Jaculus_jaculus
ENSDARG00000094010	swt1	99	35.500	ENSKMAG00000012533	swt1	58	46.329	Kryptolebias_marmoratus
ENSDARG00000094010	swt1	57	43.106	ENSLACG00000009194	SWT1	81	43.106	Latimeria_chalumnae
ENSDARG00000094010	swt1	55	50.719	ENSLOCG00000001749	swt1	98	50.095	Lepisosteus_oculatus
ENSDARG00000094010	swt1	58	37.457	ENSLAFG00000004346	-	97	37.629	Loxodonta_africana
ENSDARG00000094010	swt1	69	35.269	ENSMFAG00000031793	SWT1	97	37.973	Macaca_fascicularis
ENSDARG00000094010	swt1	69	34.241	ENSMMUG00000013882	SWT1	88	39.181	Macaca_mulatta
ENSDARG00000094010	swt1	69	35.269	ENSMNEG00000035502	SWT1	97	37.973	Macaca_nemestrina
ENSDARG00000094010	swt1	69	35.182	ENSMLEG00000038692	SWT1	97	37.801	Mandrillus_leucophaeus
ENSDARG00000094010	swt1	69	42.446	ENSMZEG00005018489	swt1	71	46.116	Maylandia_zebra
ENSDARG00000094010	swt1	56	40.035	ENSMGAG00000000973	SWT1	96	40.104	Meleagris_gallopavo
ENSDARG00000094010	swt1	69	32.647	ENSMAUG00000007996	Swt1	71	32.500	Mesocricetus_auratus
ENSDARG00000094010	swt1	59	38.215	ENSMICG00000014975	SWT1	63	38.215	Microcebus_murinus
ENSDARG00000094010	swt1	77	34.799	ENSMOCG00000009776	Swt1	80	34.799	Microtus_ochrogaster
ENSDARG00000094010	swt1	57	38.811	ENSMODG00000007472	SWT1	61	38.811	Monodelphis_domestica
ENSDARG00000094010	swt1	56	49.558	ENSMALG00000019308	swt1	58	49.381	Monopterus_albus
ENSDARG00000094010	swt1	72	36.119	MGP_CAROLIEiJ_G0014692	Swt1	68	47.674	Mus_caroli
ENSDARG00000094010	swt1	58	39.555	ENSMUSG00000052748	Swt1	68	47.953	Mus_musculus
ENSDARG00000094010	swt1	69	36.103	MGP_PahariEiJ_G0027928	Swt1	68	46.512	Mus_pahari
ENSDARG00000094010	swt1	72	35.656	MGP_SPRETEiJ_G0015499	Swt1	68	48.256	Mus_spretus
ENSDARG00000094010	swt1	57	39.298	ENSMPUG00000011913	SWT1	62	39.298	Mustela_putorius_furo
ENSDARG00000094010	swt1	58	37.733	ENSMLUG00000001142	SWT1	64	37.605	Myotis_lucifugus
ENSDARG00000094010	swt1	57	39.161	ENSNGAG00000021080	Swt1	62	38.898	Nannospalax_galili
ENSDARG00000094010	swt1	69	34.814	ENSNLEG00000018031	SWT1	73	34.795	Nomascus_leucogenys
ENSDARG00000094010	swt1	51	36.420	ENSMEUG00000000236	-	54	36.420	Notamacropus_eugenii
ENSDARG00000094010	swt1	60	45.972	ENSONIG00000009994	swt1	99	46.886	Oreochromis_niloticus
ENSDARG00000094010	swt1	60	37.073	ENSOANG00000001013	-	77	36.585	Ornithorhynchus_anatinus
ENSDARG00000094010	swt1	58	39.483	ENSOCUG00000004901	SWT1	64	39.483	Oryctolagus_cuniculus
ENSDARG00000094010	swt1	56	46.341	ENSORLG00000009682	swt1	59	46.341	Oryzias_latipes
ENSDARG00000094010	swt1	56	46.354	ENSORLG00020011654	swt1	59	46.354	Oryzias_latipes_hni
ENSDARG00000094010	swt1	56	46.341	ENSORLG00015007734	swt1	59	46.341	Oryzias_latipes_hsok
ENSDARG00000094010	swt1	56	46.303	ENSOMEG00000006607	swt1	57	46.303	Oryzias_melastigma
ENSDARG00000094010	swt1	58	39.378	ENSOGAG00000016195	SWT1	63	39.378	Otolemur_garnettii
ENSDARG00000094010	swt1	57	39.298	ENSOARG00000004156	SWT1	61	39.298	Ovis_aries
ENSDARG00000094010	swt1	69	35.182	ENSPPAG00000021400	SWT1	73	35.328	Pan_paniscus
ENSDARG00000094010	swt1	69	35.559	ENSPPRG00000023754	SWT1	73	35.226	Panthera_pardus
ENSDARG00000094010	swt1	69	35.559	ENSPTIG00000021889	SWT1	62	38.529	Panthera_tigris_altaica
ENSDARG00000094010	swt1	69	35.193	ENSPTRG00000001777	SWT1	73	35.474	Pan_troglodytes
ENSDARG00000094010	swt1	69	35.123	ENSPANG00000005099	SWT1	97	37.801	Papio_anubis
ENSDARG00000094010	swt1	58	50.175	ENSPKIG00000005979	swt1	59	50.175	Paramormyrops_kingsleyae
ENSDARG00000094010	swt1	69	37.163	ENSPSIG00000008961	SWT1	62	40.964	Pelodiscus_sinensis
ENSDARG00000094010	swt1	58	39.724	ENSPEMG00000008208	Swt1	63	39.724	Peromyscus_maniculatus_bairdii
ENSDARG00000094010	swt1	57	37.458	ENSPCIG00000002443	SWT1	62	37.458	Phascolarctos_cinereus
ENSDARG00000094010	swt1	56	45.704	ENSPFOG00000010988	-	69	44.915	Poecilia_formosa
ENSDARG00000094010	swt1	56	45.876	ENSPLAG00000022908	-	59	45.876	Poecilia_latipinna
ENSDARG00000094010	swt1	56	45.704	ENSPMEG00000006943	-	59	45.783	Poecilia_mexicana
ENSDARG00000094010	swt1	69	35.438	ENSPPYG00000000415	SWT1	73	35.328	Pongo_abelii
ENSDARG00000094010	swt1	57	36.411	ENSPVAG00000005968	SWT1	62	36.760	Pteropus_vampyrus
ENSDARG00000094010	swt1	69	42.590	ENSPNYG00000012934	swt1	71	46.281	Pundamilia_nyererei
ENSDARG00000094010	swt1	85	51.540	ENSPNAG00000017795	swt1	86	51.418	Pygocentrus_nattereri
ENSDARG00000094010	swt1	69	36.628	ENSRNOG00000032258	Swt1	73	36.483	Rattus_norvegicus
ENSDARG00000094010	swt1	58	37.088	ENSRBIG00000040630	SWT1	97	37.088	Rhinopithecus_bieti
ENSDARG00000094010	swt1	69	35.182	ENSSBOG00000028825	SWT1	72	35.556	Saimiri_boliviensis_boliviensis
ENSDARG00000094010	swt1	57	38.927	ENSSHAG00000009241	SWT1	62	38.927	Sarcophilus_harrisii
ENSDARG00000094010	swt1	56	55.091	ENSSFOG00015004895	swt1	56	55.091	Scleropages_formosus
ENSDARG00000094010	swt1	61	47.267	ENSSDUG00000012345	swt1	59	49.565	Seriola_dumerili
ENSDARG00000094010	swt1	56	48.958	ENSSLDG00000003821	swt1	59	48.958	Seriola_lalandi_dorsalis
ENSDARG00000094010	swt1	58	40.345	ENSSPUG00000003899	SWT1	63	40.345	Sphenodon_punctatus
ENSDARG00000094010	swt1	56	47.636	ENSSPAG00000001030	swt1	59	47.461	Stegastes_partitus
ENSDARG00000094010	swt1	57	40.385	ENSSSCG00000015569	SWT1	63	39.373	Sus_scrofa
ENSDARG00000094010	swt1	56	41.125	ENSTGUG00000003718	-	100	41.125	Taeniopygia_guttata
ENSDARG00000094010	swt1	56	48.263	ENSTRUG00000006420	swt1	60	48.263	Takifugu_rubripes
ENSDARG00000094010	swt1	57	38.153	ENSTTRG00000005914	SWT1	62	38.153	Tursiops_truncatus
ENSDARG00000094010	swt1	69	36.547	ENSUAMG00000020937	SWT1	67	40.000	Ursus_americanus
ENSDARG00000094010	swt1	57	40.000	ENSUMAG00000021918	SWT1	62	40.000	Ursus_maritimus
ENSDARG00000094010	swt1	57	38.947	ENSVVUG00000009182	SWT1	64	38.947	Vulpes_vulpes
ENSDARG00000094010	swt1	57	46.701	ENSXMAG00000023472	-	60	46.780	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	21873635.	IBA	Process