EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000094309 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-92e7.6
Alias: -
Full Name: si:ch73-92e7.6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5811 bases
Position: chr22:2574765-2580575
Accession: ZDB-GENE-081031-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	1	6
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	2	6
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	3	6
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	4	6
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	5	6
ENSDARP00000121636	zf-C2H2	PF00096.26	9.2e-25	6	6
ENSDARP00000121636	zf-met	PF12874.7	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000143505	-	857	-	ENSDARP00000121636	242 (aa)	-	B8JM04

Gene Model

Click here to download ENSDARG00000094309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000094309	si:ch73-92e7.6	97	65.942	ENSDARG00000093875	zgc:174224	74	65.942
ENSDARG00000094309	si:ch73-92e7.6	83	60.526	ENSDARG00000077712	zgc:113886	96	44.828
ENSDARG00000094309	si:ch73-92e7.6	100	69.634	ENSDARG00000092246	si:dkey-20i20.3	84	69.634
ENSDARG00000094309	si:ch73-92e7.6	100	55.738	ENSDARG00000088507	znf982	98	55.738
ENSDARG00000094309	si:ch73-92e7.6	100	58.555	ENSDARG00000098613	si:dkey-15h8.16	89	57.787
ENSDARG00000094309	si:ch73-92e7.6	100	50.410	ENSDARG00000111899	zgc:171435	92	50.410
ENSDARG00000094309	si:ch73-92e7.6	98	47.009	ENSDARG00000101093	zgc:162971	97	52.083
ENSDARG00000094309	si:ch73-92e7.6	92	45.270	ENSDARG00000014775	zgc:113220	71	60.584
ENSDARG00000094309	si:ch73-92e7.6	92	56.134	ENSDARG00000108441	CU570894.1	99	49.281
ENSDARG00000094309	si:ch73-92e7.6	99	66.000	ENSDARG00000095455	si:dkey-20i20.10	96	66.000
ENSDARG00000094309	si:ch73-92e7.6	100	69.271	ENSDARG00000101885	si:dkey-20i20.11	98	69.634
ENSDARG00000094309	si:ch73-92e7.6	100	66.887	ENSDARG00000071833	znf1162	99	66.887
ENSDARG00000094309	si:ch73-92e7.6	100	58.065	ENSDARG00000103827	znf1144	97	58.065
ENSDARG00000094309	si:ch73-92e7.6	98	55.000	ENSDARG00000071725	znf1167	100	56.667
ENSDARG00000094309	si:ch73-92e7.6	93	62.879	ENSDARG00000113666	znf1173	80	62.879
ENSDARG00000094309	si:ch73-92e7.6	95	70.732	ENSDARG00000092027	si:dkey-20i20.9	75	64.103
ENSDARG00000094309	si:ch73-92e7.6	95	70.122	ENSDARG00000094343	si:dkey-20i20.8	80	64.615
ENSDARG00000094309	si:ch73-92e7.6	97	51.667	ENSDARG00000099618	si:dkey-1b17.6	89	62.069
ENSDARG00000094309	si:ch73-92e7.6	100	71.728	ENSDARG00000071714	znf983	98	71.728
ENSDARG00000094309	si:ch73-92e7.6	100	63.235	ENSDARG00000093562	si:dkey-20i20.7	86	63.235
ENSDARG00000094309	si:ch73-92e7.6	100	50.413	ENSDARG00000112141	znf1169	85	50.413
ENSDARG00000094309	si:ch73-92e7.6	100	53.279	ENSDARG00000115326	znf1002	90	53.279
ENSDARG00000094309	si:ch73-92e7.6	100	66.225	ENSDARG00000102053	znf1164	100	69.748
ENSDARG00000094309	si:ch73-92e7.6	100	56.028	ENSDARG00000078159	zgc:175284	100	50.570
ENSDARG00000094309	si:ch73-92e7.6	100	56.557	ENSDARG00000094736	znf1157	95	76.316
ENSDARG00000094309	si:ch73-92e7.6	100	61.719	ENSDARG00000077085	zgc:110821	97	64.706
ENSDARG00000094309	si:ch73-92e7.6	100	66.265	ENSDARG00000101425	si:dkey-1b17.5	85	59.391