EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000094343 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.8
Alias: -
Full Name: si:dkey-20i20.8
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2070 bases
Position: chr22:2793382-2795451
Accession: ZDB-GENE-060503-59
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121998	zf-C2H2	PF00096.26	3.6e-14	1	3
ENSDARP00000121998	zf-C2H2	PF00096.26	3.6e-14	2	3
ENSDARP00000121998	zf-C2H2	PF00096.26	3.6e-14	3	3
ENSDARP00000121998	zf-met	PF12874.7	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144980	-	625	-	ENSDARP00000121998	208 (aa)	-	A3KPU7

Gene Model

Click here to download ENSDARG00000094343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000094343	si:dkey-20i20.8	80	59.055	ENSDARG00000077085	zgc:110821	94	54.000
ENSDARG00000094343	si:dkey-20i20.8	84	50.568	ENSDARG00000098898	si:ch211-255f4.2	99	50.568
ENSDARG00000094343	si:dkey-20i20.8	80	64.615	ENSDARG00000094309	si:ch73-92e7.6	95	70.122
ENSDARG00000094343	si:dkey-20i20.8	94	85.641	ENSDARG00000092027	si:dkey-20i20.9	90	85.572
ENSDARG00000094343	si:dkey-20i20.8	70	49.727	ENSDARG00000113666	znf1173	67	55.484
ENSDARG00000094343	si:dkey-20i20.8	85	57.055	ENSDARG00000092088	si:dkey-4c15.8	99	63.158
ENSDARG00000094343	si:dkey-20i20.8	80	63.816	ENSDARG00000071833	znf1162	100	63.816
ENSDARG00000094343	si:dkey-20i20.8	80	59.406	ENSDARG00000078159	zgc:175284	99	59.130
ENSDARG00000094343	si:dkey-20i20.8	74	51.299	ENSDARG00000077712	zgc:113886	88	51.299
ENSDARG00000094343	si:dkey-20i20.8	82	55.233	ENSDARG00000088507	znf982	89	57.831
ENSDARG00000094343	si:dkey-20i20.8	85	67.614	ENSDARG00000098613	si:dkey-15h8.16	98	62.437
ENSDARG00000094343	si:dkey-20i20.8	79	66.667	ENSDARG00000094736	znf1157	95	71.053
ENSDARG00000094343	si:dkey-20i20.8	80	60.684	ENSDARG00000095704	si:dkey-4c15.13	100	63.971
ENSDARG00000094343	si:dkey-20i20.8	94	53.226	ENSDARG00000102053	znf1164	100	65.546
ENSDARG00000094343	si:dkey-20i20.8	79	53.086	ENSDARG00000093672	zgc:171435	100	62.393
ENSDARG00000094343	si:dkey-20i20.8	80	71.084	ENSDARG00000101885	si:dkey-20i20.11	99	71.084
ENSDARG00000094343	si:dkey-20i20.8	83	71.512	ENSDARG00000092246	si:dkey-20i20.3	75	71.512
ENSDARG00000094343	si:dkey-20i20.8	80	73.333	ENSDARG00000071714	znf983	97	70.732
ENSDARG00000094343	si:dkey-20i20.8	84	59.659	ENSDARG00000115326	znf1002	98	60.847
ENSDARG00000094343	si:dkey-20i20.8	97	55.172	ENSDARG00000099618	si:dkey-1b17.6	97	54.187
ENSDARG00000094343	si:dkey-20i20.8	85	61.224	ENSDARG00000093875	zgc:174224	89	55.952
ENSDARG00000094343	si:dkey-20i20.8	79	56.364	ENSDARG00000100587	zgc:113886	100	45.223
ENSDARG00000094343	si:dkey-20i20.8	80	48.214	ENSDARG00000014775	zgc:113220	73	50.595
ENSDARG00000094343	si:dkey-20i20.8	80	66.071	ENSDARG00000071725	znf1167	99	66.071
ENSDARG00000094343	si:dkey-20i20.8	84	64.773	ENSDARG00000101425	si:dkey-1b17.5	89	64.773
ENSDARG00000094343	si:dkey-20i20.8	79	70.732	ENSDARG00000095455	si:dkey-20i20.10	90	70.732
ENSDARG00000094343	si:dkey-20i20.8	97	54.455	ENSDARG00000112141	znf1169	95	54.455
ENSDARG00000094343	si:dkey-20i20.8	88	73.529	ENSDARG00000093562	si:dkey-20i20.7	89	73.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000094343	si:dkey-20i20.8	80	48.000	ENSSDUG00000008682	-	99	48.000	Seriola_dumerili