EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000094491 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-202m22.1
Alias: -
Full Name: si:ch211-202m22.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7083 bases
Position: chr13:24325413-24332495
Accession: ZDB-GENE-060531-31
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000118694	RIO1	PF01163.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000145351	-	2216	XM_021480845	ENSDARP00000118694	279 (aa)	XP_021336520	F1QM49
ENSDART00000140842	-	1300	-	ENSDARP00000114861	424 (aa)	-	Q1MTH8

Gene Model

Click here to download ENSDARG00000094491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000094491	si:ch211-202m22.1	99	98.561	ENSDARG00000078558	si:dkey-22i16.10	50	98.561
ENSDARG00000094491	si:ch211-202m22.1	97	95.941	ENSDARG00000092501	si:dkey-80c24.5	100	95.941
ENSDARG00000094491	si:ch211-202m22.1	99	85.560	ENSDARG00000073947	si:dkeyp-67e1.6	99	85.560
ENSDARG00000094491	si:ch211-202m22.1	99	89.568	ENSDARG00000097997	si:ch211-272b8.7	71	89.568
ENSDARG00000094491	si:ch211-202m22.1	84	99.142	ENSDARG00000114012	CU062431.1	90	99.142
ENSDARG00000094491	si:ch211-202m22.1	97	95.941	ENSDARG00000070692	si:dkey-80c24.1	100	95.941
ENSDARG00000094491	si:ch211-202m22.1	99	85.199	ENSDARG00000113513	si:dkeyp-67e1.6	99	85.199
ENSDARG00000094491	si:ch211-202m22.1	99	97.842	ENSDARG00000052677	si:ch211-138g9.2	51	97.842
ENSDARG00000094491	si:ch211-202m22.1	83	95.671	ENSDARG00000113783	si:dkeyp-67e1.6	90	95.671
ENSDARG00000094491	si:ch211-202m22.1	99	98.561	ENSDARG00000101352	si:dkey-34d22.3	90	99.142