EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000094514 (Gene tree)
Gene ID: 570117
Gene Symbol: si:dkey-7l6.3
Alias: -
Full Name: si:dkey-7l6.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5772 bases
Position: chr2:42354643-42360414
Accession: ZDB-GENE-070912-586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121731	zf-C2H2	PF00096.26	5.1e-15	1	3
ENSDARP00000121731	zf-C2H2	PF00096.26	5.1e-15	2	3
ENSDARP00000121731	zf-C2H2	PF00096.26	5.1e-15	3	3
ENSDARP00000121731	zf-met	PF12874.7	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000140863	-	2003	XM_009298735	ENSDARP00000121731	406 (aa)	XP_009297010	E9QEY9
ENSDART00000144274	-	893	XM_009298737	ENSDARP00000115479	258 (aa)	XP_009297012	E9QGD7

Gene Model

Click here to download ENSDARG00000094514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000094514	si:dkey-7l6.3	95	54.869	ENSAMXG00000019757	si:dkey-7l6.3	100	56.325	Astyanax_mexicanus
ENSDARG00000094514	si:dkey-7l6.3	95	54.187	ENSIPUG00000014394	si:dkey-7l6.3	100	54.187	Ictalurus_punctatus
ENSDARG00000094514	si:dkey-7l6.3	95	56.835	ENSPNAG00000003616	si:dkey-7l6.3	99	57.314	Pygocentrus_nattereri
ENSDARG00000094514	si:dkey-7l6.3	95	36.232	ENSTRUG00000022905	-	98	36.829	Takifugu_rubripes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function