EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000094609 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-68b22.2
Alias: -
Full Name: si:ch73-68b22.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13742 bases
Position: chr21:43080469-43094210
Accession: ZDB-GENE-091204-355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000113289	2OG-FeII_Oxy	PF03171.20	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144747	-	1463	XM_021469252	ENSDARP00000113289	487 (aa)	XP_021324927	F1R022
ENSDART00000189683	-	1357	-	ENSDARP00000150146	204 (aa)	-	A0A2R8QAS7

Gene Model

Click here to download ENSDARG00000094609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000094609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000094609	si:ch73-68b22.2	99	37.891	ENSDARG00000071082	p4ha1b	94	37.891
ENSDARG00000094609	si:ch73-68b22.2	99	39.072	ENSDARG00000033537	p4ha1a	94	39.072
ENSDARG00000094609	si:ch73-68b22.2	90	38.987	ENSDARG00000017038	zgc:152670	90	38.333
ENSDARG00000094609	si:ch73-68b22.2	99	39.499	ENSDARG00000010085	p4ha2	95	39.499

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSG00000072682	P4HA2	95	40.583	Homo_sapiens
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSAMEG00000017663	P4HA2	94	40.000	Ailuropoda_melanoleuca
ENSDARG00000094609	si:ch73-68b22.2	99	36.364	ENSACIG00000009196	p4ha2	98	36.364	Amphilophus_citrinellus
ENSDARG00000094609	si:ch73-68b22.2	90	40.592	ENSAOCG00000003785	p4ha2	90	40.592	Amphiprion_ocellaris
ENSDARG00000094609	si:ch73-68b22.2	99	39.499	ENSAPEG00000019437	p4ha2	95	39.499	Amphiprion_percula
ENSDARG00000094609	si:ch73-68b22.2	99	38.432	ENSATEG00000011722	p4ha2	94	38.432	Anabas_testudineus
ENSDARG00000094609	si:ch73-68b22.2	99	38.476	ENSAPLG00000003370	P4HA2	98	38.593	Anas_platyrhynchos
ENSDARG00000094609	si:ch73-68b22.2	99	38.219	ENSACAG00000012415	P4HA2	95	38.219	Anolis_carolinensis
ENSDARG00000094609	si:ch73-68b22.2	99	40.392	ENSANAG00000022840	P4HA2	95	40.430	Aotus_nancymaae
ENSDARG00000094609	si:ch73-68b22.2	99	37.918	ENSACLG00000012990	p4ha2	95	39.831	Astatotilapia_calliptera
ENSDARG00000094609	si:ch73-68b22.2	99	50.595	ENSAMXG00000036173	si:ch73-68b22.2	95	50.595	Astyanax_mexicanus
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSBTAG00000001116	P4HA2	95	39.652	Bos_taurus
ENSDARG00000094609	si:ch73-68b22.2	99	40.388	ENSCJAG00000012936	P4HA2	95	40.388	Callithrix_jacchus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSCAFG00000000824	P4HA2	95	40.388	Canis_familiaris
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSCAFG00020014266	P4HA2	95	40.388	Canis_lupus_dingo
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSCHIG00000021007	P4HA2	95	39.652	Capra_hircus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSTSYG00000003233	P4HA2	95	40.388	Carlito_syrichta
ENSDARG00000094609	si:ch73-68b22.2	90	40.977	ENSCAPG00000011398	P4HA2	89	40.977	Cavia_aperea
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSCPOG00000008411	P4HA2	95	39.652	Cavia_porcellus
ENSDARG00000094609	si:ch73-68b22.2	99	40.388	ENSCCAG00000030663	P4HA2	95	40.388	Cebus_capucinus
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSCATG00000037172	P4HA2	95	40.583	Cercocebus_atys
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSCLAG00000013749	P4HA2	95	40.000	Chinchilla_lanigera
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSCSAG00000013842	P4HA2	95	40.583	Chlorocebus_sabaeus
ENSDARG00000094609	si:ch73-68b22.2	71	42.632	ENSCHOG00000000025	P4HA2	70	42.632	Choloepus_hoffmanni
ENSDARG00000094609	si:ch73-68b22.2	99	39.845	ENSCPBG00000025117	P4HA2	95	39.845	Chrysemys_picta_bellii
ENSDARG00000094609	si:ch73-68b22.2	99	40.388	ENSCANG00000031458	P4HA2	95	40.388	Colobus_angolensis_palliatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	ENSCGRG00001012916	P4ha2	95	40.971	Cricetulus_griseus_chok1gshd
ENSDARG00000094609	si:ch73-68b22.2	99	40.388	ENSCGRG00000008403	P4ha2	95	40.583	Cricetulus_griseus_crigri
ENSDARG00000094609	si:ch73-68b22.2	99	36.660	ENSCSEG00000013215	p4ha2	95	36.660	Cynoglossus_semilaevis
ENSDARG00000094609	si:ch73-68b22.2	99	40.310	ENSCVAG00000000703	p4ha2	95	40.310	Cyprinodon_variegatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSDORG00000013569	P4ha2	95	40.194	Dipodomys_ordii
ENSDARG00000094609	si:ch73-68b22.2	99	39.612	ENSEASG00005016292	P4HA2	95	39.612	Equus_asinus_asinus
ENSDARG00000094609	si:ch73-68b22.2	99	39.265	ENSECAG00000024817	P4HA2	95	39.265	Equus_caballus
ENSDARG00000094609	si:ch73-68b22.2	88	55.556	ENSEEUG00000013366	P4HA2	80	55.556	Erinaceus_europaeus
ENSDARG00000094609	si:ch73-68b22.2	99	39.959	ENSELUG00000021666	p4ha2	95	39.884	Esox_lucius
ENSDARG00000094609	si:ch73-68b22.2	99	39.839	ENSFCAG00000014013	P4HA2	95	39.612	Felis_catus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSFDAG00000006739	P4HA2	95	40.000	Fukomys_damarensis
ENSDARG00000094609	si:ch73-68b22.2	99	41.517	ENSGMOG00000006035	p4ha2	94	41.517	Gadus_morhua
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSGALG00000006677	P4HA2	100	39.806	Gallus_gallus
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSGAFG00000005640	p4ha2	100	40.583	Gambusia_affinis
ENSDARG00000094609	si:ch73-68b22.2	99	40.619	ENSGACG00000020865	p4ha2	92	40.619	Gasterosteus_aculeatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSGGOG00000006366	P4HA2	95	40.583	Gorilla_gorilla
ENSDARG00000094609	si:ch73-68b22.2	99	39.189	ENSHBUG00000005250	p4ha2	93	39.189	Haplochromis_burtoni
ENSDARG00000094609	si:ch73-68b22.2	99	40.971	ENSHGLG00000013514	P4HA2	95	40.971	Heterocephalus_glaber_female
ENSDARG00000094609	si:ch73-68b22.2	99	40.971	ENSHGLG00100000246	P4HA2	95	40.971	Heterocephalus_glaber_male
ENSDARG00000094609	si:ch73-68b22.2	99	38.269	ENSHCOG00000017395	p4ha2	98	38.269	Hippocampus_comes
ENSDARG00000094609	si:ch73-68b22.2	99	41.879	ENSIPUG00000017927	p4ha2	99	40.392	Ictalurus_punctatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSSTOG00000007747	P4HA2	95	40.000	Ictidomys_tridecemlineatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSJJAG00000023004	P4ha2	95	40.000	Jaculus_jaculus
ENSDARG00000094609	si:ch73-68b22.2	99	39.535	ENSKMAG00000011787	p4ha2	96	39.535	Kryptolebias_marmoratus
ENSDARG00000094609	si:ch73-68b22.2	99	37.918	ENSLBEG00000016497	p4ha2	88	37.918	Labrus_bergylta
ENSDARG00000094609	si:ch73-68b22.2	99	41.683	ENSLACG00000010010	P4HA2	95	41.683	Latimeria_chalumnae
ENSDARG00000094609	si:ch73-68b22.2	99	45.079	ENSLOCG00000010375	P4HA2	95	45.079	Lepisosteus_oculatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.462	ENSLAFG00000007412	P4HA2	95	40.154	Loxodonta_africana
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSMFAG00000040077	P4HA2	95	40.583	Macaca_fascicularis
ENSDARG00000094609	si:ch73-68b22.2	99	37.864	ENSMMUG00000010858	P4HA2	94	37.864	Macaca_mulatta
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSMNEG00000043295	P4HA2	95	40.583	Macaca_nemestrina
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSMLEG00000039335	P4HA2	95	40.583	Mandrillus_leucophaeus
ENSDARG00000094609	si:ch73-68b22.2	99	40.741	ENSMAMG00000021549	p4ha2	98	40.583	Mastacembelus_armatus
ENSDARG00000094609	si:ch73-68b22.2	99	39.382	ENSMZEG00005008207	p4ha2	93	39.382	Maylandia_zebra
ENSDARG00000094609	si:ch73-68b22.2	99	39.458	ENSMGAG00000008789	P4HA2	95	39.458	Meleagris_gallopavo
ENSDARG00000094609	si:ch73-68b22.2	99	38.298	ENSMAUG00000007802	P4ha2	95	38.123	Mesocricetus_auratus
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSMICG00000005666	P4HA2	95	40.583	Microcebus_murinus
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSMOCG00000010121	P4ha2	95	40.388	Microtus_ochrogaster
ENSDARG00000094609	si:ch73-68b22.2	99	40.156	ENSMMOG00000013676	p4ha2	94	40.156	Mola_mola
ENSDARG00000094609	si:ch73-68b22.2	99	38.760	ENSMODG00000014035	P4HA2	95	38.760	Monodelphis_domestica
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	MGP_CAROLIEiJ_G0016353	P4ha2	95	40.777	Mus_caroli
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	ENSMUSG00000018906	P4ha2	94	40.777	Mus_musculus
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	MGP_PahariEiJ_G0017488	P4ha2	95	40.777	Mus_pahari
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	MGP_SPRETEiJ_G0017195	P4ha2	95	40.777	Mus_spretus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSMPUG00000010718	P4HA2	95	40.388	Mustela_putorius_furo
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSMLUG00000001634	P4HA2	95	40.000	Myotis_lucifugus
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSNGAG00000019060	P4ha2	95	40.000	Nannospalax_galili
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSNLEG00000012634	P4HA2	95	40.583	Nomascus_leucogenys
ENSDARG00000094609	si:ch73-68b22.2	76	56.000	ENSMEUG00000014251	-	69	56.000	Notamacropus_eugenii
ENSDARG00000094609	si:ch73-68b22.2	99	39.265	ENSOPRG00000011633	P4HA2	95	39.265	Ochotona_princeps
ENSDARG00000094609	si:ch73-68b22.2	99	39.072	ENSODEG00000009419	P4HA2	95	39.072	Octodon_degus
ENSDARG00000094609	si:ch73-68b22.2	99	39.535	ENSONIG00000008377	p4ha2	95	39.535	Oreochromis_niloticus
ENSDARG00000094609	si:ch73-68b22.2	99	39.612	ENSORLG00000019064	p4ha2	95	39.612	Oryzias_latipes
ENSDARG00000094609	si:ch73-68b22.2	99	39.417	ENSORLG00015005888	p4ha2	95	39.417	Oryzias_latipes_hsok
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSOMEG00000004357	p4ha2	95	40.194	Oryzias_melastigma
ENSDARG00000094609	si:ch73-68b22.2	99	39.961	ENSOARG00000015394	P4HA2	94	39.808	Ovis_aries
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSPPAG00000028815	P4HA2	95	40.583	Pan_paniscus
ENSDARG00000094609	si:ch73-68b22.2	99	39.612	ENSPPRG00000005209	P4HA2	95	39.612	Panthera_pardus
ENSDARG00000094609	si:ch73-68b22.2	99	39.612	ENSPTIG00000006055	P4HA2	95	39.612	Panthera_tigris_altaica
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSPTRG00000017213	P4HA2	95	40.583	Pan_troglodytes
ENSDARG00000094609	si:ch73-68b22.2	99	41.683	ENSPKIG00000001702	P4HA2	95	41.683	Paramormyrops_kingsleyae
ENSDARG00000094609	si:ch73-68b22.2	99	40.619	ENSPKIG00000003533	p4ha2	94	40.619	Paramormyrops_kingsleyae
ENSDARG00000094609	si:ch73-68b22.2	99	46.215	ENSPKIG00000003449	si:ch73-68b22.2	88	46.230	Paramormyrops_kingsleyae
ENSDARG00000094609	si:ch73-68b22.2	99	39.189	ENSPSIG00000012716	P4HA2	95	39.189	Pelodiscus_sinensis
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSPEMG00000004967	P4ha2	95	40.388	Peromyscus_maniculatus_bairdii
ENSDARG00000094609	si:ch73-68b22.2	99	39.382	ENSPCIG00000001023	P4HA2	95	39.382	Phascolarctos_cinereus
ENSDARG00000094609	si:ch73-68b22.2	99	40.891	ENSPFOG00000009942	p4ha2	95	40.891	Poecilia_formosa
ENSDARG00000094609	si:ch73-68b22.2	99	40.891	ENSPLAG00000003519	p4ha2	96	40.661	Poecilia_latipinna
ENSDARG00000094609	si:ch73-68b22.2	99	40.891	ENSPMEG00000002935	p4ha2	95	40.891	Poecilia_mexicana
ENSDARG00000094609	si:ch73-68b22.2	99	40.661	ENSPREG00000004360	p4ha2	98	40.661	Poecilia_reticulata
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSPPYG00000015755	P4HA2	95	40.583	Pongo_abelii
ENSDARG00000094609	si:ch73-68b22.2	99	40.194	ENSPCOG00000017003	P4HA2	95	40.194	Propithecus_coquereli
ENSDARG00000094609	si:ch73-68b22.2	99	41.313	ENSPNAG00000014592	p4ha2	100	41.313	Pygocentrus_nattereri
ENSDARG00000094609	si:ch73-68b22.2	99	40.777	ENSRNOG00000033663	P4ha2	95	40.777	Rattus_norvegicus
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSRBIG00000043030	P4HA2	95	40.154	Rhinopithecus_bieti
ENSDARG00000094609	si:ch73-68b22.2	99	40.583	ENSRROG00000041342	P4HA2	95	40.583	Rhinopithecus_roxellana
ENSDARG00000094609	si:ch73-68b22.2	99	40.388	ENSSBOG00000032486	P4HA2	95	40.388	Saimiri_boliviensis_boliviensis
ENSDARG00000094609	si:ch73-68b22.2	99	39.231	ENSSHAG00000002885	P4HA2	88	39.231	Sarcophilus_harrisii
ENSDARG00000094609	si:ch73-68b22.2	99	42.248	ENSSFOG00015001608	p4ha2	100	42.248	Scleropages_formosus
ENSDARG00000094609	si:ch73-68b22.2	99	40.936	ENSSMAG00000005843	p4ha2	95	40.936	Scophthalmus_maximus
ENSDARG00000094609	si:ch73-68b22.2	99	39.535	ENSSLDG00000008672	p4ha2	95	39.535	Seriola_lalandi_dorsalis
ENSDARG00000094609	si:ch73-68b22.2	99	39.038	ENSSPUG00000009999	P4HA2	99	39.038	Sphenodon_punctatus
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSSPAG00000012480	p4ha2	94	39.806	Stegastes_partitus
ENSDARG00000094609	si:ch73-68b22.2	99	39.806	ENSSSCG00000020915	P4HA2	95	40.000	Sus_scrofa
ENSDARG00000094609	si:ch73-68b22.2	99	38.432	ENSTGUG00000001347	P4HA2	98	38.815	Taeniopygia_guttata
ENSDARG00000094609	si:ch73-68b22.2	99	40.467	ENSTRUG00000000302	p4ha2	94	40.467	Takifugu_rubripes
ENSDARG00000094609	si:ch73-68b22.2	99	32.689	ENSTBEG00000010113	P4HA2	95	32.689	Tupaia_belangeri
ENSDARG00000094609	si:ch73-68b22.2	99	39.845	ENSTTRG00000002908	P4HA2	95	40.232	Tursiops_truncatus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSUMAG00000018565	P4HA2	95	40.000	Ursus_maritimus
ENSDARG00000094609	si:ch73-68b22.2	99	40.000	ENSVVUG00000024626	P4HA2	95	40.388	Vulpes_vulpes
ENSDARG00000094609	si:ch73-68b22.2	99	38.343	ENSXETG00000006987	p4ha2	95	38.343	Xenopus_tropicalis
ENSDARG00000094609	si:ch73-68b22.2	99	40.891	ENSXMAG00000012283	p4ha2	95	40.891	Xiphophorus_maculatus