EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000095283 (Gene tree)
Gene ID: 100002257
Gene Symbol: si:dkeyp-2e4.3
Alias: -
Full Name: si:dkeyp-2e4.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 16306 bases
Position: chr13:44827514-44843819
Accession: ZDB-GENE-061009-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000153573	zf-C2H2	PF00096.26	1.8e-29	1	5
ENSDARP00000153573	zf-C2H2	PF00096.26	1.8e-29	2	5
ENSDARP00000153573	zf-C2H2	PF00096.26	1.8e-29	3	5
ENSDARP00000153573	zf-C2H2	PF00096.26	1.8e-29	4	5
ENSDARP00000153573	zf-C2H2	PF00096.26	1.8e-29	5	5
ENSDARP00000113824	zf-C2H2	PF00096.26	1.1e-21	1	4
ENSDARP00000113824	zf-C2H2	PF00096.26	1.1e-21	2	4
ENSDARP00000113824	zf-C2H2	PF00096.26	1.1e-21	3	4
ENSDARP00000113824	zf-C2H2	PF00096.26	1.1e-21	4	4
ENSDARP00000113824	zf-met	PF12874.7	9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000140442	-	1520	XM_017358662	ENSDARP00000113824	253 (aa)	XP_017214151	A2CEX9
ENSDART00000184195	-	1737	-	ENSDARP00000153573	267 (aa)	-	A2CEY2

Gene Model

Click here to download ENSDARG00000095283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000095283	si:dkeyp-2e4.3	99	79.365	ENSDARG00000079263	si:dkeyp-2e4.2	99	79.365
ENSDARG00000095283	si:dkeyp-2e4.3	97	64.032	ENSDARG00000005010	si:dkeyp-2e4.8	99	66.535

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function