EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000095332 (Gene tree)
Gene ID: 558690
Gene Symbol: si:dkey-14d8.1
Alias: -
Full Name: si:dkey-14d8.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8731 bases
Position: chr4:5362909-5371639
Accession: ZDB-GENE-041210-86
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	1	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	2	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	3	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	4	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	5	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	6	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	7	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	8	9
ENSDARP00000146071	zf-C2H2	PF00096.26	1e-44	9	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	1	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	2	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	3	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	4	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	5	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	6	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	7	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	8	9
ENSDARP00000150826	zf-C2H2	PF00096.26	2.2e-44	9	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	1	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	2	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	3	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	4	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	5	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	6	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	7	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	8	9
ENSDARP00000125338	zf-C2H2	PF00096.26	1.6e-43	9	9
ENSDARP00000125271	zf-C2H2	PF00096.26	3.8e-11	1	2
ENSDARP00000125271	zf-C2H2	PF00096.26	3.8e-11	2	2
ENSDARP00000146071	zf-met	PF12874.7	1.5e-06	1	2
ENSDARP00000146071	zf-met	PF12874.7	1.5e-06	2	2
ENSDARP00000150826	zf-met	PF12874.7	3.1e-06	1	1
ENSDARP00000125338	zf-met	PF12874.7	2.3e-05	1	1
ENSDARP00000125271	zf-met	PF12874.7	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000145474	-	701	-	ENSDARP00000122558	92 (aa)	-	F1QW51
ENSDART00000133423	-	503	-	ENSDARP00000119291	168 (aa)	-	F1R6Q0
ENSDART00000189559	-	2766	-	ENSDARP00000146071	622 (aa)	-	A0A2R8PY96
ENSDART00000184963	-	2219	-	ENSDARP00000150826	661 (aa)	-	A0A2R8QCU1
ENSDART00000150788	-	349	-	ENSDARP00000125271	94 (aa)	-	H0WEJ3
ENSDART00000150697	-	5928	XM_021475409	ENSDARP00000125338	784 (aa)	XP_021331084	H0WER0

Gene Model

Click here to download ENSDARG00000095332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000095332	si:dkey-14d8.1	93	46.809	ENSDARG00000102053	znf1164	51	54.237
ENSDARG00000095332	si:dkey-14d8.1	70	56.897	ENSDARG00000093672	zgc:171435	51	58.182
ENSDARG00000095332	si:dkey-14d8.1	57	40.234	ENSDARG00000096528	si:ch73-236c18.9	77	38.835
ENSDARG00000095332	si:dkey-14d8.1	56	41.534	ENSDARG00000075834	si:dkey-182i3.8	73	41.534
ENSDARG00000095332	si:dkey-14d8.1	57	38.746	ENSDARG00000105295	LO017784.1	86	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000095332	si:dkey-14d8.1	70	52.381	ENSAPOG00000002691	-	59	40.299	Acanthochromis_polyacanthus
ENSDARG00000095332	si:dkey-14d8.1	78	50.000	ENSACIG00000016182	-	78	43.131	Amphilophus_citrinellus
ENSDARG00000095332	si:dkey-14d8.1	97	38.743	ENSCSEG00000009915	-	96	38.743	Cynoglossus_semilaevis
ENSDARG00000095332	si:dkey-14d8.1	72	52.381	ENSEBUG00000016857	-	67	42.368	Eptatretus_burgeri
ENSDARG00000095332	si:dkey-14d8.1	67	59.322	ENSEBUG00000003128	-	87	41.667	Eptatretus_burgeri
ENSDARG00000095332	si:dkey-14d8.1	84	51.613	ENSEBUG00000010794	-	82	39.153	Eptatretus_burgeri
ENSDARG00000095332	si:dkey-14d8.1	78	47.541	ENSEBUG00000012053	-	72	39.590	Eptatretus_burgeri
ENSDARG00000095332	si:dkey-14d8.1	68	58.065	ENSEBUG00000013213	-	73	42.705	Eptatretus_burgeri
ENSDARG00000095332	si:dkey-14d8.1	78	48.148	ENSFHEG00000007256	-	60	41.139	Fundulus_heteroclitus
ENSDARG00000095332	si:dkey-14d8.1	97	36.267	ENSFHEG00000018423	-	94	36.976	Fundulus_heteroclitus
ENSDARG00000095332	si:dkey-14d8.1	99	35.155	ENSGAFG00000018340	-	96	38.335	Gambusia_affinis
ENSDARG00000095332	si:dkey-14d8.1	100	69.415	ENSIPUG00000005775	si:dkey-14d8.1	100	70.694	Ictalurus_punctatus
ENSDARG00000095332	si:dkey-14d8.1	99	36.647	ENSLBEG00000001920	-	97	36.967	Labrus_bergylta
ENSDARG00000095332	si:dkey-14d8.1	96	38.415	ENSMAMG00000009555	-	97	38.755	Mastacembelus_armatus
ENSDARG00000095332	si:dkey-14d8.1	68	56.522	ENSMAMG00000017946	-	63	46.471	Mastacembelus_armatus
ENSDARG00000095332	si:dkey-14d8.1	67	56.452	ENSORLG00000022502	-	95	47.545	Oryzias_latipes
ENSDARG00000095332	si:dkey-14d8.1	67	56.452	ENSORLG00020018791	-	95	47.545	Oryzias_latipes_hni
ENSDARG00000095332	si:dkey-14d8.1	73	57.143	ENSORLG00015003796	-	76	37.750	Oryzias_latipes_hsok
ENSDARG00000095332	si:dkey-14d8.1	67	56.452	ENSORLG00015017255	-	96	36.957	Oryzias_latipes_hsok
ENSDARG00000095332	si:dkey-14d8.1	67	56.452	ENSOMEG00000010952	-	95	47.545	Oryzias_melastigma
ENSDARG00000095332	si:dkey-14d8.1	67	56.452	ENSPMGG00000023739	-	97	35.052	Periophthalmus_magnuspinnatus
ENSDARG00000095332	si:dkey-14d8.1	97	39.175	ENSPFOG00000016324	-	96	40.000	Poecilia_formosa
ENSDARG00000095332	si:dkey-14d8.1	99	36.642	ENSPLAG00000001279	-	96	37.892	Poecilia_latipinna
ENSDARG00000095332	si:dkey-14d8.1	67	57.143	ENSPLAG00000004290	-	80	42.951	Poecilia_latipinna
ENSDARG00000095332	si:dkey-14d8.1	99	36.642	ENSPMEG00000016548	-	97	37.575	Poecilia_mexicana
ENSDARG00000095332	si:dkey-14d8.1	89	50.794	ENSPNYG00000017141	-	62	49.231	Pundamilia_nyererei
ENSDARG00000095332	si:dkey-14d8.1	97	38.710	ENSSMAG00000000183	-	95	37.484	Scophthalmus_maximus
ENSDARG00000095332	si:dkey-14d8.1	96	37.087	ENSSDUG00000006133	-	94	38.432	Seriola_dumerili
ENSDARG00000095332	si:dkey-14d8.1	96	37.631	ENSSLDG00000010460	-	94	38.896	Seriola_lalandi_dorsalis
ENSDARG00000095332	si:dkey-14d8.1	67	53.968	ENSSPAG00000008610	-	58	46.667	Stegastes_partitus
ENSDARG00000095332	si:dkey-14d8.1	67	46.875	ENSSPAG00000009396	-	64	43.529	Stegastes_partitus
ENSDARG00000095332	si:dkey-14d8.1	97	40.314	ENSSPAG00000013319	-	96	40.314	Stegastes_partitus
ENSDARG00000095332	si:dkey-14d8.1	99	35.191	ENSXMAG00000024928	-	96	36.855	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0016233	telomere capping	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0070187	shelterin complex	-	IEA	Component