EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000095397 (Gene tree)
Gene ID: -
Gene Symbol: znf1170
Alias: si:ch73-92e7.1
Full Name: zinc finger protein 1170
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 773 bases
Position: chr22:2504524-2505296
Accession: ZDB-GENE-081031-81
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000112944	zf-C2H2	PF00096.26	5.8e-14	1	2
ENSDARP00000112944	zf-C2H2	PF00096.26	5.8e-14	2	2
ENSDARP00000112944	zf-met	PF12874.7	6e-07	1	2
ENSDARP00000112944	zf-met	PF12874.7	6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000136686	-	493	-	ENSDARP00000112944	128 (aa)	-	B8JLZ7

Gene Model

Click here to download ENSDARG00000095397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000095397	znf1170	100	68.182	ENSDARG00000093875	zgc:174224	68	65.909
ENSDARG00000095397	znf1170	100	60.938	ENSDARG00000093672	zgc:171435	100	59.292
ENSDARG00000095397	znf1170	99	64.885	ENSDARG00000102053	znf1164	100	66.087
ENSDARG00000095397	znf1170	100	64.394	ENSDARG00000095704	si:dkey-4c15.13	95	64.348
ENSDARG00000095397	znf1170	100	65.714	ENSDARG00000100544	zgc:173486	64	65.714
ENSDARG00000095397	znf1170	100	66.667	ENSDARG00000014775	zgc:113220	68	66.667
ENSDARG00000095397	znf1170	100	61.017	ENSDARG00000077085	zgc:110821	87	64.545
ENSDARG00000095397	znf1170	99	60.630	ENSDARG00000092088	si:dkey-4c15.8	99	60.000
ENSDARG00000095397	znf1170	100	68.462	ENSDARG00000094736	znf1157	95	70.175
ENSDARG00000095397	znf1170	100	68.182	ENSDARG00000071833	znf1162	84	64.567
ENSDARG00000095397	znf1170	96	59.055	ENSDARG00000098898	si:ch211-255f4.2	85	59.055