EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000095455 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.10
Alias: -
Full Name: si:dkey-20i20.10
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4573 bases
Position: chr22:2769236-2773808
Accession: ZDB-GENE-060503-905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000122759	zf-C2H2	PF00096.26	8.1e-23	1	5
ENSDARP00000122759	zf-C2H2	PF00096.26	8.1e-23	2	5
ENSDARP00000122759	zf-C2H2	PF00096.26	8.1e-23	3	5
ENSDARP00000122759	zf-C2H2	PF00096.26	8.1e-23	4	5
ENSDARP00000122759	zf-C2H2	PF00096.26	8.1e-23	5	5
ENSDARP00000122759	zf-met	PF12874.7	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000141836	-	623	-	ENSDARP00000122759	208 (aa)	-	F1QSZ4

Gene Model

Click here to download ENSDARG00000095455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000095455	si:dkey-20i20.10	91	48.750	ENSDARG00000071833	znf1162	99	60.667
ENSDARG00000095455	si:dkey-20i20.10	96	53.571	ENSDARG00000078159	zgc:175284	99	47.222
ENSDARG00000095455	si:dkey-20i20.10	90	62.667	ENSDARG00000102053	znf1164	99	62.329
ENSDARG00000095455	si:dkey-20i20.10	74	58.824	ENSDARG00000077712	zgc:113886	95	45.930
ENSDARG00000095455	si:dkey-20i20.10	91	56.842	ENSDARG00000094736	znf1157	98	64.957
ENSDARG00000095455	si:dkey-20i20.10	90	70.732	ENSDARG00000094343	si:dkey-20i20.8	79	70.732
ENSDARG00000095455	si:dkey-20i20.10	99	84.058	ENSDARG00000093562	si:dkey-20i20.7	85	84.058
ENSDARG00000095455	si:dkey-20i20.10	90	63.576	ENSDARG00000092088	si:dkey-4c15.8	97	63.393
ENSDARG00000095455	si:dkey-20i20.10	95	55.556	ENSDARG00000077085	zgc:110821	92	58.120
ENSDARG00000095455	si:dkey-20i20.10	98	57.664	ENSDARG00000093875	zgc:174224	78	47.291
ENSDARG00000095455	si:dkey-20i20.10	93	87.047	ENSDARG00000101885	si:dkey-20i20.11	99	87.047
ENSDARG00000095455	si:dkey-20i20.10	95	52.941	ENSDARG00000099618	si:dkey-1b17.6	88	57.759
ENSDARG00000095455	si:dkey-20i20.10	99	86.473	ENSDARG00000071714	znf983	99	85.492
ENSDARG00000095455	si:dkey-20i20.10	91	53.182	ENSDARG00000115326	znf1002	89	50.909
ENSDARG00000095455	si:dkey-20i20.10	78	58.537	ENSDARG00000101425	si:dkey-1b17.5	82	59.259
ENSDARG00000095455	si:dkey-20i20.10	93	83.420	ENSDARG00000092246	si:dkey-20i20.3	84	83.420
ENSDARG00000095455	si:dkey-20i20.10	88	53.039	ENSDARG00000113666	znf1173	82	53.039
ENSDARG00000095455	si:dkey-20i20.10	91	52.198	ENSDARG00000088507	znf982	97	52.198
ENSDARG00000095455	si:dkey-20i20.10	96	66.000	ENSDARG00000094309	si:ch73-92e7.6	99	66.000
ENSDARG00000095455	si:dkey-20i20.10	90	70.988	ENSDARG00000092027	si:dkey-20i20.9	72	70.988
ENSDARG00000095455	si:dkey-20i20.10	90	57.895	ENSDARG00000071725	znf1167	94	57.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000095455	si:dkey-20i20.10	90	52.727	ENSMZEG00005027943	-	73	46.970	Maylandia_zebra