EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000095750 (Gene tree)
Gene ID: 566022
Gene Symbol: fdxacb1
Alias: fb11b09|si:dkey-71l1.3|wu:fb11b09
Full Name: ferredoxin-fold anticodon binding domain containing 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 11912 bases
Position: chr5:57726425-57738336
Accession: ZDB-GENE-030131-8403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115967	FDX-ACB	PF03147.14	5.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000134684	-	1905	-	ENSDARP00000115967	582 (aa)	-	A5PMV5

Gene Model

Click here to download ENSDARG00000095750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095750's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000095750	fdxacb1	99	41.297	ENSG00000255561	FDXACB1	99	41.297	Homo_sapiens
ENSDARG00000095750	fdxacb1	100	44.785	ENSAPOG00000009041	FDXACB1	100	44.785	Acanthochromis_polyacanthus
ENSDARG00000095750	fdxacb1	100	44.785	ENSAPOG00000009726	fdxacb1	100	44.785	Acanthochromis_polyacanthus
ENSDARG00000095750	fdxacb1	100	48.435	ENSACIG00000004208	fdxacb1	100	48.435	Amphilophus_citrinellus
ENSDARG00000095750	fdxacb1	100	44.684	ENSAOCG00000007455	fdxacb1	100	44.992	Amphiprion_ocellaris
ENSDARG00000095750	fdxacb1	100	44.684	ENSAPEG00000023857	fdxacb1	100	44.684	Amphiprion_percula
ENSDARG00000095750	fdxacb1	100	44.242	ENSATEG00000020757	fdxacb1	100	44.242	Anabas_testudineus
ENSDARG00000095750	fdxacb1	100	40.872	ENSAPLG00000004681	FDXACB1	100	40.872	Anas_platyrhynchos
ENSDARG00000095750	fdxacb1	99	41.864	ENSANAG00000022744	FDXACB1	99	41.864	Aotus_nancymaae
ENSDARG00000095750	fdxacb1	100	45.917	ENSACLG00000020497	fdxacb1	100	45.917	Astatotilapia_calliptera
ENSDARG00000095750	fdxacb1	100	45.917	ENSACLG00000027415	-	100	45.917	Astatotilapia_calliptera
ENSDARG00000095750	fdxacb1	100	68.729	ENSAMXG00000038372	fdxacb1	100	68.729	Astyanax_mexicanus
ENSDARG00000095750	fdxacb1	99	41.920	ENSBTAG00000004949	FDXACB1	99	41.920	Bos_taurus
ENSDARG00000095750	fdxacb1	99	42.063	ENSCJAG00000040413	FDXACB1	99	42.063	Callithrix_jacchus
ENSDARG00000095750	fdxacb1	99	42.584	ENSCAFG00020006314	FDXACB1	99	42.584	Canis_lupus_dingo
ENSDARG00000095750	fdxacb1	99	42.516	ENSCHIG00000017261	FDXACB1	99	42.516	Capra_hircus
ENSDARG00000095750	fdxacb1	99	41.587	ENSTSYG00000029218	FDXACB1	99	41.587	Carlito_syrichta
ENSDARG00000095750	fdxacb1	99	41.308	ENSCPOG00000032584	FDXACB1	99	41.308	Cavia_porcellus
ENSDARG00000095750	fdxacb1	99	41.429	ENSCCAG00000024232	FDXACB1	99	41.429	Cebus_capucinus
ENSDARG00000095750	fdxacb1	99	41.786	ENSCATG00000035600	FDXACB1	99	41.786	Cercocebus_atys
ENSDARG00000095750	fdxacb1	99	42.332	ENSCLAG00000015613	FDXACB1	99	42.332	Chinchilla_lanigera
ENSDARG00000095750	fdxacb1	99	42.038	ENSCSAG00000002878	FDXACB1	99	42.038	Chlorocebus_sabaeus
ENSDARG00000095750	fdxacb1	99	41.440	ENSCHOG00000003037	FDXACB1	99	41.440	Choloepus_hoffmanni
ENSDARG00000095750	fdxacb1	100	40.874	ENSCPBG00000009087	FDXACB1	100	40.874	Chrysemys_picta_bellii
ENSDARG00000095750	fdxacb1	99	41.614	ENSCANG00000043844	FDXACB1	99	41.614	Colobus_angolensis_palliatus
ENSDARG00000095750	fdxacb1	99	40.224	ENSCGRG00001023825	Fdxacb1	97	40.224	Cricetulus_griseus_chok1gshd
ENSDARG00000095750	fdxacb1	99	40.224	ENSCGRG00000001752	Fdxacb1	97	40.224	Cricetulus_griseus_crigri
ENSDARG00000095750	fdxacb1	100	44.951	ENSCSEG00000006964	fdxacb1	100	44.951	Cynoglossus_semilaevis
ENSDARG00000095750	fdxacb1	100	44.136	ENSCVAG00000013005	fdxacb1	100	44.359	Cyprinodon_variegatus
ENSDARG00000095750	fdxacb1	99	41.346	ENSDNOG00000037748	FDXACB1	99	41.346	Dasypus_novemcinctus
ENSDARG00000095750	fdxacb1	99	41.905	ENSDORG00000028060	Fdxacb1	99	41.905	Dipodomys_ordii
ENSDARG00000095750	fdxacb1	99	42.332	ENSETEG00000004898	FDXACB1	99	42.332	Echinops_telfairi
ENSDARG00000095750	fdxacb1	99	42.605	ENSEASG00005007198	FDXACB1	99	42.605	Equus_asinus_asinus
ENSDARG00000095750	fdxacb1	99	42.949	ENSECAG00000009561	FDXACB1	99	42.949	Equus_caballus
ENSDARG00000095750	fdxacb1	82	55.660	ENSEEUG00000009839	FDXACB1	83	55.660	Erinaceus_europaeus
ENSDARG00000095750	fdxacb1	99	43.673	ENSELUG00000011250	fdxacb1	99	43.538	Esox_lucius
ENSDARG00000095750	fdxacb1	99	42.584	ENSFCAG00000024559	FDXACB1	99	42.584	Felis_catus
ENSDARG00000095750	fdxacb1	99	41.827	ENSFALG00000006177	FDXACB1	99	41.827	Ficedula_albicollis
ENSDARG00000095750	fdxacb1	99	41.853	ENSFDAG00000016115	FDXACB1	99	42.492	Fukomys_damarensis
ENSDARG00000095750	fdxacb1	100	44.427	ENSFHEG00000016602	fdxacb1	100	44.427	Fundulus_heteroclitus
ENSDARG00000095750	fdxacb1	99	39.776	ENSGALG00000007967	FDXACB1	99	39.776	Gallus_gallus
ENSDARG00000095750	fdxacb1	100	45.131	ENSGAFG00000001162	fdxacb1	95	45.131	Gambusia_affinis
ENSDARG00000095750	fdxacb1	100	46.417	ENSGACG00000020639	fdxacb1	99	46.417	Gasterosteus_aculeatus
ENSDARG00000095750	fdxacb1	100	39.748	ENSGAGG00000020645	FDXACB1	98	40.063	Gopherus_agassizii
ENSDARG00000095750	fdxacb1	99	41.456	ENSGGOG00000037643	FDXACB1	99	41.456	Gorilla_gorilla
ENSDARG00000095750	fdxacb1	100	45.763	ENSHBUG00000003489	fdxacb1	100	45.763	Haplochromis_burtoni
ENSDARG00000095750	fdxacb1	99	41.346	ENSHGLG00000004171	FDXACB1	99	41.346	Heterocephalus_glaber_female
ENSDARG00000095750	fdxacb1	99	41.346	ENSHGLG00100017458	FDXACB1	99	41.346	Heterocephalus_glaber_male
ENSDARG00000095750	fdxacb1	100	44.539	ENSHCOG00000018986	fdxacb1	100	44.539	Hippocampus_comes
ENSDARG00000095750	fdxacb1	100	63.884	ENSIPUG00000022559	FDXACB1	100	63.884	Ictalurus_punctatus
ENSDARG00000095750	fdxacb1	99	42.240	ENSJJAG00000010367	Fdxacb1	99	42.240	Jaculus_jaculus
ENSDARG00000095750	fdxacb1	100	46.901	ENSKMAG00000022235	fdxacb1	100	46.901	Kryptolebias_marmoratus
ENSDARG00000095750	fdxacb1	100	44.190	ENSLBEG00000016100	fdxacb1	100	44.190	Labrus_bergylta
ENSDARG00000095750	fdxacb1	90	52.778	ENSLACG00000018780	FDXACB1	100	52.778	Latimeria_chalumnae
ENSDARG00000095750	fdxacb1	99	43.381	ENSLAFG00000014650	FDXACB1	99	43.381	Loxodonta_africana
ENSDARG00000095750	fdxacb1	99	42.197	ENSMFAG00000002448	FDXACB1	99	42.197	Macaca_fascicularis
ENSDARG00000095750	fdxacb1	99	42.038	ENSMNEG00000041539	FDXACB1	99	42.038	Macaca_nemestrina
ENSDARG00000095750	fdxacb1	100	43.873	ENSMAMG00000018674	fdxacb1	99	43.873	Mastacembelus_armatus
ENSDARG00000095750	fdxacb1	100	45.917	ENSMZEG00005018799	fdxacb1	100	45.917	Maylandia_zebra
ENSDARG00000095750	fdxacb1	99	40.097	ENSMAUG00000019310	Fdxacb1	99	40.097	Mesocricetus_auratus
ENSDARG00000095750	fdxacb1	99	41.879	ENSMICG00000045510	FDXACB1	99	41.879	Microcebus_murinus
ENSDARG00000095750	fdxacb1	99	39.936	ENSMOCG00000011835	Fdxacb1	99	39.936	Microtus_ochrogaster
ENSDARG00000095750	fdxacb1	100	48.576	ENSMMOG00000018749	fdxacb1	100	48.667	Mola_mola
ENSDARG00000095750	fdxacb1	76	62.232	ENSMALG00000007153	fdxacb1	90	62.232	Monopterus_albus
ENSDARG00000095750	fdxacb1	99	41.667	MGP_CAROLIEiJ_G0032197	Fdxacb1	99	41.667	Mus_caroli
ENSDARG00000095750	fdxacb1	99	40.545	ENSMUSG00000037845	Fdxacb1	99	40.545	Mus_musculus
ENSDARG00000095750	fdxacb1	99	40.865	MGP_PahariEiJ_G0015065	Fdxacb1	99	40.865	Mus_pahari
ENSDARG00000095750	fdxacb1	99	40.705	MGP_SPRETEiJ_G0033336	Fdxacb1	99	40.705	Mus_spretus
ENSDARG00000095750	fdxacb1	99	42.540	ENSMPUG00000003585	FDXACB1	99	42.540	Mustela_putorius_furo
ENSDARG00000095750	fdxacb1	99	41.997	ENSMLUG00000014872	FDXACB1	99	41.997	Myotis_lucifugus
ENSDARG00000095750	fdxacb1	99	39.936	ENSNGAG00000014606	Fdxacb1	99	39.936	Nannospalax_galili
ENSDARG00000095750	fdxacb1	100	49.322	ENSNBRG00000006939	fdxacb1	100	49.322	Neolamprologus_brichardi
ENSDARG00000095750	fdxacb1	99	41.930	ENSNLEG00000030387	FDXACB1	99	41.930	Nomascus_leucogenys
ENSDARG00000095750	fdxacb1	99	41.521	ENSMEUG00000003077	FDXACB1	99	41.521	Notamacropus_eugenii
ENSDARG00000095750	fdxacb1	99	39.457	ENSOPRG00000012593	FDXACB1	99	39.457	Ochotona_princeps
ENSDARG00000095750	fdxacb1	99	41.483	ENSODEG00000010360	FDXACB1	99	41.812	Octodon_degus
ENSDARG00000095750	fdxacb1	100	49.172	ENSONIG00000004939	fdxacb1	100	49.172	Oreochromis_niloticus
ENSDARG00000095750	fdxacb1	99	39.773	ENSOANG00000003844	-	99	39.773	Ornithorhynchus_anatinus
ENSDARG00000095750	fdxacb1	100	41.782	ENSORLG00020008420	fdxacb1	100	41.782	Oryzias_latipes_hni
ENSDARG00000095750	fdxacb1	100	44.197	ENSOMEG00000019353	fdxacb1	100	44.197	Oryzias_melastigma
ENSDARG00000095750	fdxacb1	99	42.289	ENSOARG00000015064	FDXACB1	99	42.289	Ovis_aries
ENSDARG00000095750	fdxacb1	99	41.456	ENSPPAG00000030196	FDXACB1	99	41.456	Pan_paniscus
ENSDARG00000095750	fdxacb1	99	43.016	ENSPPRG00000005967	FDXACB1	99	43.016	Panthera_pardus
ENSDARG00000095750	fdxacb1	99	43.016	ENSPTIG00000016420	FDXACB1	99	43.016	Panthera_tigris_altaica
ENSDARG00000095750	fdxacb1	99	41.456	ENSPTRG00000004272	FDXACB1	99	41.456	Pan_troglodytes
ENSDARG00000095750	fdxacb1	99	42.038	ENSPANG00000019268	FDXACB1	99	42.038	Papio_anubis
ENSDARG00000095750	fdxacb1	100	58.076	ENSPKIG00000009407	fdxacb1	100	58.076	Paramormyrops_kingsleyae
ENSDARG00000095750	fdxacb1	100	47.179	ENSPMGG00000004912	fdxacb1	100	47.179	Periophthalmus_magnuspinnatus
ENSDARG00000095750	fdxacb1	99	40.388	ENSPEMG00000020188	Fdxacb1	99	40.388	Peromyscus_maniculatus_bairdii
ENSDARG00000095750	fdxacb1	100	44.977	ENSPFOG00000022156	fdxacb1	100	44.977	Poecilia_formosa
ENSDARG00000095750	fdxacb1	100	44.977	ENSPLAG00000019966	fdxacb1	100	44.977	Poecilia_latipinna
ENSDARG00000095750	fdxacb1	100	44.977	ENSPMEG00000002110	fdxacb1	100	44.977	Poecilia_mexicana
ENSDARG00000095750	fdxacb1	100	44.359	ENSPREG00000017453	fdxacb1	100	44.822	Poecilia_reticulata
ENSDARG00000095750	fdxacb1	99	42.022	ENSPPYG00000003866	FDXACB1	99	42.022	Pongo_abelii
ENSDARG00000095750	fdxacb1	99	43.561	ENSPCAG00000000333	FDXACB1	99	43.899	Procavia_capensis
ENSDARG00000095750	fdxacb1	99	42.222	ENSPCOG00000027443	FDXACB1	99	42.222	Propithecus_coquereli
ENSDARG00000095750	fdxacb1	99	41.827	ENSPVAG00000009610	FDXACB1	99	41.827	Pteropus_vampyrus
ENSDARG00000095750	fdxacb1	100	45.455	ENSPNYG00000012981	fdxacb1	100	45.455	Pundamilia_nyererei
ENSDARG00000095750	fdxacb1	100	69.931	ENSPNAG00000003284	fdxacb1	100	69.931	Pygocentrus_nattereri
ENSDARG00000095750	fdxacb1	87	53.333	ENSRNOG00000010743	Fdxacb1	97	53.333	Rattus_norvegicus
ENSDARG00000095750	fdxacb1	99	41.614	ENSRBIG00000014195	FDXACB1	99	41.614	Rhinopithecus_bieti
ENSDARG00000095750	fdxacb1	99	41.456	ENSRROG00000045453	FDXACB1	99	41.456	Rhinopithecus_roxellana
ENSDARG00000095750	fdxacb1	99	42.173	ENSSBOG00000027732	FDXACB1	99	42.173	Saimiri_boliviensis_boliviensis
ENSDARG00000095750	fdxacb1	100	59.863	ENSSFOG00015009862	fdxacb1	100	60.034	Scleropages_formosus
ENSDARG00000095750	fdxacb1	100	44.168	ENSSMAG00000010250	fdxacb1	100	44.168	Scophthalmus_maximus
ENSDARG00000095750	fdxacb1	100	44.796	ENSSDUG00000004461	fdxacb1	100	45.234	Seriola_dumerili
ENSDARG00000095750	fdxacb1	100	44.495	ENSSLDG00000017388	fdxacb1	100	44.646	Seriola_lalandi_dorsalis
ENSDARG00000095750	fdxacb1	99	39.968	ENSSARG00000002541	FDXACB1	99	39.968	Sorex_araneus
ENSDARG00000095750	fdxacb1	100	42.308	ENSSPUG00000010598	FDXACB1	100	42.308	Sphenodon_punctatus
ENSDARG00000095750	fdxacb1	100	46.379	ENSSPAG00000007903	fdxacb1	100	46.379	Stegastes_partitus
ENSDARG00000095750	fdxacb1	99	42.468	ENSSSCG00000021871	FDXACB1	99	42.468	Sus_scrofa
ENSDARG00000095750	fdxacb1	99	41.868	ENSTGUG00000000326	FDXACB1	100	41.385	Taeniopygia_guttata
ENSDARG00000095750	fdxacb1	100	50.000	ENSTRUG00000017134	fdxacb1	100	50.000	Takifugu_rubripes
ENSDARG00000095750	fdxacb1	100	49.916	ENSTNIG00000009977	fdxacb1	100	49.916	Tetraodon_nigroviridis
ENSDARG00000095750	fdxacb1	99	42.222	ENSTBEG00000010204	FDXACB1	99	42.222	Tupaia_belangeri
ENSDARG00000095750	fdxacb1	99	42.834	ENSTTRG00000010496	FDXACB1	99	42.834	Tursiops_truncatus
ENSDARG00000095750	fdxacb1	99	43.471	ENSUAMG00000018595	FDXACB1	99	43.471	Ursus_americanus
ENSDARG00000095750	fdxacb1	99	43.471	ENSUMAG00000006940	FDXACB1	99	43.471	Ursus_maritimus
ENSDARG00000095750	fdxacb1	85	44.660	ENSVPAG00000000044	FDXACB1	83	44.660	Vicugna_pacos
ENSDARG00000095750	fdxacb1	99	42.424	ENSVVUG00000015845	FDXACB1	99	42.424	Vulpes_vulpes
ENSDARG00000095750	fdxacb1	100	38.080	ENSXETG00000010172	fdxacb1	100	38.080	Xenopus_tropicalis
ENSDARG00000095750	fdxacb1	100	46.441	ENSXCOG00000007930	fdxacb1	100	46.949	Xiphophorus_couchianus
ENSDARG00000095750	fdxacb1	100	43.895	ENSXMAG00000010929	fdxacb1	100	44.977	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	21873635.	IBA	Function
GO:0070475	rRNA base methylation	21873635.	IBA	Process