EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000095904 (Gene tree)
Gene ID: 393476
Gene Symbol: prpf31
Alias: zgc:66177
Full Name: PRP31 pre-mRNA processing factor 31 homolog (yeast)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 8314 bases
Position: chr16:32082359-32090672
Accession: ZDB-GENE-040426-1561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120708	Prp31_C	PF09785.9	1.2e-43	1	1
ENSDARP00000157055	Prp31_C	PF09785.9	1.2e-43	1	1
ENSDARP00000120708	Nop	PF01798.18	1e-81	1	1
ENSDARP00000157055	Nop	PF01798.18	1e-81	1	1
ENSDARP00000117782	Nop	PF01798.18	4.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000190122	-	1542	-	ENSDARP00000157055	508 (aa)	-	Q7SXM7
ENSDART00000140794	-	908	-	ENSDARP00000117782	240 (aa)	-	E9QCW6
ENSDART00000137029	-	1867	-	ENSDARP00000120708	508 (aa)	-	Q7SXM7

Gene Model

Click here to download ENSDARG00000095904's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000095904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000095904	prpf31	91	85.345	ENSG00000105618	PRPF31	99	82.213	Homo_sapiens
ENSDARG00000095904	prpf31	93	93.038	ENSAPOG00000020310	prpf31	98	94.004	Acanthochromis_polyacanthus
ENSDARG00000095904	prpf31	91	84.483	ENSAMEG00000004502	PRPF31	99	82.213	Ailuropoda_melanoleuca
ENSDARG00000095904	prpf31	99	91.881	ENSACIG00000006591	prpf31	99	91.881	Amphilophus_citrinellus
ENSDARG00000095904	prpf31	99	90.297	ENSAOCG00000021333	prpf31	99	91.720	Amphiprion_ocellaris
ENSDARG00000095904	prpf31	99	92.079	ENSAPEG00000008035	prpf31	99	92.079	Amphiprion_percula
ENSDARG00000095904	prpf31	99	92.277	ENSATEG00000022705	prpf31	99	92.277	Anabas_testudineus
ENSDARG00000095904	prpf31	91	86.393	ENSACAG00000016061	PRPF31	99	82.772	Anolis_carolinensis
ENSDARG00000095904	prpf31	82	88.702	ENSANAG00000020822	PRPF31	98	89.320	Aotus_nancymaae
ENSDARG00000095904	prpf31	99	92.079	ENSACLG00000021238	prpf31	99	90.891	Astatotilapia_calliptera
ENSDARG00000095904	prpf31	99	92.731	ENSAMXG00000012329	prpf31	99	92.731	Astyanax_mexicanus
ENSDARG00000095904	prpf31	91	85.560	ENSBTAG00000007757	PRPF31	99	82.411	Bos_taurus
ENSDARG00000095904	prpf31	99	44.841	WBGene00022458	prp-31	99	45.040	Caenorhabditis_elegans
ENSDARG00000095904	prpf31	91	85.345	ENSCJAG00000018525	PRPF31	99	82.213	Callithrix_jacchus
ENSDARG00000095904	prpf31	91	85.560	ENSCAFG00000002700	PRPF31	99	82.411	Canis_familiaris
ENSDARG00000095904	prpf31	91	85.560	ENSCAFG00020018376	PRPF31	99	82.411	Canis_lupus_dingo
ENSDARG00000095904	prpf31	91	82.328	ENSCHIG00000021020	PRPF31	99	79.447	Capra_hircus
ENSDARG00000095904	prpf31	91	85.991	ENSTSYG00000013569	PRPF31	99	82.806	Carlito_syrichta
ENSDARG00000095904	prpf31	91	85.345	ENSCAPG00000013797	PRPF31	99	82.213	Cavia_aperea
ENSDARG00000095904	prpf31	91	85.345	ENSCPOG00000011507	PRPF31	99	82.213	Cavia_porcellus
ENSDARG00000095904	prpf31	91	85.345	ENSCCAG00000020552	-	99	82.213	Cebus_capucinus
ENSDARG00000095904	prpf31	89	78.540	ENSCCAG00000022236	-	96	78.540	Cebus_capucinus
ENSDARG00000095904	prpf31	91	85.345	ENSCATG00000006020	PRPF31	99	82.213	Cercocebus_atys
ENSDARG00000095904	prpf31	91	85.345	ENSCLAG00000001700	PRPF31	99	82.213	Chinchilla_lanigera
ENSDARG00000095904	prpf31	91	85.345	ENSCSAG00000001903	PRPF31	99	82.213	Chlorocebus_sabaeus
ENSDARG00000095904	prpf31	85	88.018	ENSCPBG00000011670	PRPF31	90	88.018	Chrysemys_picta_bellii
ENSDARG00000095904	prpf31	95	56.087	ENSCING00000002806	-	100	54.310	Ciona_intestinalis
ENSDARG00000095904	prpf31	99	61.793	ENSCSAVG00000010862	-	94	61.598	Ciona_savignyi
ENSDARG00000095904	prpf31	91	85.560	ENSCANG00000029967	PRPF31	99	82.411	Colobus_angolensis_palliatus
ENSDARG00000095904	prpf31	91	85.776	ENSCGRG00001004873	Prpf31	99	82.609	Cricetulus_griseus_chok1gshd
ENSDARG00000095904	prpf31	91	85.931	ENSCGRG00000012910	Prpf31	99	85.931	Cricetulus_griseus_crigri
ENSDARG00000095904	prpf31	100	90.392	ENSCSEG00000018961	prpf31	100	89.608	Cynoglossus_semilaevis
ENSDARG00000095904	prpf31	99	91.881	ENSCVAG00000000226	prpf31	99	91.881	Cyprinodon_variegatus
ENSDARG00000095904	prpf31	91	85.345	ENSDNOG00000032884	PRPF31	98	82.213	Dasypus_novemcinctus
ENSDARG00000095904	prpf31	91	85.745	ENSDORG00000008022	Prpf31	99	82.411	Dipodomys_ordii
ENSDARG00000095904	prpf31	98	59.200	FBgn0036487	Prp31	99	59.200	Drosophila_melanogaster
ENSDARG00000095904	prpf31	78	89.189	ENSETEG00000017891	PRPF31	85	89.189	Echinops_telfairi
ENSDARG00000095904	prpf31	77	54.499	ENSEBUG00000004819	prpf31	71	77.512	Eptatretus_burgeri
ENSDARG00000095904	prpf31	91	85.560	ENSEASG00005021593	PRPF31	99	82.411	Equus_asinus_asinus
ENSDARG00000095904	prpf31	91	85.560	ENSECAG00000020667	PRPF31	99	82.411	Equus_caballus
ENSDARG00000095904	prpf31	74	82.011	ENSEEUG00000006128	PRPF31	98	82.011	Erinaceus_europaeus
ENSDARG00000095904	prpf31	99	90.291	ENSELUG00000014820	prpf31	100	90.291	Esox_lucius
ENSDARG00000095904	prpf31	91	85.560	ENSFCAG00000014037	PRPF31	99	82.411	Felis_catus
ENSDARG00000095904	prpf31	93	84.388	ENSFDAG00000011961	PRPF31	99	82.411	Fukomys_damarensis
ENSDARG00000095904	prpf31	100	84.298	ENSFHEG00000003642	prpf31	74	94.972	Fundulus_heteroclitus
ENSDARG00000095904	prpf31	99	88.713	ENSGMOG00000005345	prpf31	98	88.911	Gadus_morhua
ENSDARG00000095904	prpf31	99	91.683	ENSGAFG00000013128	prpf31	100	91.683	Gambusia_affinis
ENSDARG00000095904	prpf31	99	90.495	ENSGACG00000011464	prpf31	99	90.495	Gasterosteus_aculeatus
ENSDARG00000095904	prpf31	91	85.991	ENSGAGG00000000670	PRPF31	99	82.341	Gopherus_agassizii
ENSDARG00000095904	prpf31	91	85.345	ENSGGOG00000016516	PRPF31	99	82.213	Gorilla_gorilla
ENSDARG00000095904	prpf31	99	91.881	ENSHBUG00000005311	prpf31	99	90.693	Haplochromis_burtoni
ENSDARG00000095904	prpf31	91	85.776	ENSHGLG00000010504	PRPF31	99	82.738	Heterocephalus_glaber_female
ENSDARG00000095904	prpf31	91	73.922	ENSHGLG00100005911	PRPF31	99	71.627	Heterocephalus_glaber_male
ENSDARG00000095904	prpf31	99	91.716	ENSHCOG00000020890	prpf31	99	91.716	Hippocampus_comes
ENSDARG00000095904	prpf31	99	91.159	ENSIPUG00000000171	prpf31	99	91.749	Ictalurus_punctatus
ENSDARG00000095904	prpf31	91	85.345	ENSSTOG00000001287	PRPF31	99	82.213	Ictidomys_tridecemlineatus
ENSDARG00000095904	prpf31	91	85.560	ENSJJAG00000015594	Prpf31	99	82.411	Jaculus_jaculus
ENSDARG00000095904	prpf31	99	91.485	ENSKMAG00000004967	prpf31	99	91.683	Kryptolebias_marmoratus
ENSDARG00000095904	prpf31	99	91.089	ENSLBEG00000017225	prpf31	99	91.089	Labrus_bergylta
ENSDARG00000095904	prpf31	91	77.707	ENSLACG00000009449	PRPF31	99	75.439	Latimeria_chalumnae
ENSDARG00000095904	prpf31	99	84.170	ENSLOCG00000000007	prpf31	99	84.170	Lepisosteus_oculatus
ENSDARG00000095904	prpf31	91	85.560	ENSLAFG00000004559	PRPF31	99	82.411	Loxodonta_africana
ENSDARG00000095904	prpf31	91	85.345	ENSMFAG00000001108	PRPF31	99	82.213	Macaca_fascicularis
ENSDARG00000095904	prpf31	91	85.345	ENSMMUG00000022297	PRPF31	99	82.213	Macaca_mulatta
ENSDARG00000095904	prpf31	91	85.345	ENSMNEG00000035943	PRPF31	99	82.213	Macaca_nemestrina
ENSDARG00000095904	prpf31	91	85.345	ENSMLEG00000031953	PRPF31	99	82.213	Mandrillus_leucophaeus
ENSDARG00000095904	prpf31	99	92.475	ENSMAMG00000019433	prpf31	99	92.475	Mastacembelus_armatus
ENSDARG00000095904	prpf31	99	92.079	ENSMZEG00005016314	prpf31	99	90.891	Maylandia_zebra
ENSDARG00000095904	prpf31	91	85.991	ENSMAUG00000011581	Prpf31	99	82.806	Mesocricetus_auratus
ENSDARG00000095904	prpf31	91	85.560	ENSMICG00000002355	PRPF31	99	82.411	Microcebus_murinus
ENSDARG00000095904	prpf31	91	85.776	ENSMOCG00000002128	Prpf31	99	82.609	Microtus_ochrogaster
ENSDARG00000095904	prpf31	99	91.881	ENSMMOG00000016451	prpf31	99	91.881	Mola_mola
ENSDARG00000095904	prpf31	91	86.177	ENSMODG00000004098	PRPF31	99	82.937	Monodelphis_domestica
ENSDARG00000095904	prpf31	99	89.307	ENSMALG00000009251	prpf31	99	88.911	Monopterus_albus
ENSDARG00000095904	prpf31	91	85.776	MGP_CAROLIEiJ_G0029094	Prpf31	99	82.609	Mus_caroli
ENSDARG00000095904	prpf31	91	85.560	ENSMUSG00000008373	Prpf31	99	82.411	Mus_musculus
ENSDARG00000095904	prpf31	91	85.560	MGP_PahariEiJ_G0020963	Prpf31	99	82.411	Mus_pahari
ENSDARG00000095904	prpf31	91	85.776	MGP_SPRETEiJ_G0030147	Prpf31	99	82.609	Mus_spretus
ENSDARG00000095904	prpf31	91	85.560	ENSMPUG00000010341	PRPF31	99	82.411	Mustela_putorius_furo
ENSDARG00000095904	prpf31	99	80.952	ENSMLUG00000016862	PRPF31	99	81.386	Myotis_lucifugus
ENSDARG00000095904	prpf31	91	85.745	ENSNGAG00000024131	Prpf31	99	82.411	Nannospalax_galili
ENSDARG00000095904	prpf31	99	91.881	ENSNBRG00000002354	prpf31	99	90.693	Neolamprologus_brichardi
ENSDARG00000095904	prpf31	81	82.367	ENSNLEG00000006261	-	99	72.222	Nomascus_leucogenys
ENSDARG00000095904	prpf31	83	80.000	ENSMEUG00000002943	PRPF31	100	75.229	Notamacropus_eugenii
ENSDARG00000095904	prpf31	57	87.889	ENSOPRG00000000055	PRPF31	100	87.889	Ochotona_princeps
ENSDARG00000095904	prpf31	91	85.345	ENSODEG00000000855	PRPF31	99	82.213	Octodon_degus
ENSDARG00000095904	prpf31	100	91.194	ENSONIG00000006574	prpf31	99	90.891	Oreochromis_niloticus
ENSDARG00000095904	prpf31	90	74.884	ENSOANG00000009386	-	93	65.152	Ornithorhynchus_anatinus
ENSDARG00000095904	prpf31	91	77.634	ENSOCUG00000002027	PRPF31	99	75.148	Oryctolagus_cuniculus
ENSDARG00000095904	prpf31	99	90.748	ENSORLG00000011189	prpf31	100	90.748	Oryzias_latipes
ENSDARG00000095904	prpf31	99	90.748	ENSORLG00020007965	prpf31	100	90.748	Oryzias_latipes_hni
ENSDARG00000095904	prpf31	99	90.748	ENSORLG00015013676	prpf31	100	90.748	Oryzias_latipes_hsok
ENSDARG00000095904	prpf31	99	91.142	ENSOMEG00000010384	prpf31	100	91.142	Oryzias_melastigma
ENSDARG00000095904	prpf31	59	90.365	ENSOGAG00000006936	PRPF31	98	90.365	Otolemur_garnettii
ENSDARG00000095904	prpf31	91	73.922	ENSOARG00000003033	PRPF31	93	73.922	Ovis_aries
ENSDARG00000095904	prpf31	91	85.345	ENSPPAG00000032209	PRPF31	99	82.213	Pan_paniscus
ENSDARG00000095904	prpf31	91	85.560	ENSPPRG00000011686	PRPF31	99	82.411	Panthera_pardus
ENSDARG00000095904	prpf31	91	85.560	ENSPTIG00000008467	PRPF31	99	82.411	Panthera_tigris_altaica
ENSDARG00000095904	prpf31	91	85.345	ENSPTRG00000011443	PRPF31	99	82.213	Pan_troglodytes
ENSDARG00000095904	prpf31	91	85.345	ENSPTRG00000045480	-	99	82.213	Pan_troglodytes
ENSDARG00000095904	prpf31	91	85.345	ENSPANG00000025402	PRPF31	99	82.213	Papio_anubis
ENSDARG00000095904	prpf31	100	91.977	ENSPKIG00000011812	prpf31	100	91.977	Paramormyrops_kingsleyae
ENSDARG00000095904	prpf31	60	91.118	ENSPSIG00000003405	PRPF31	96	89.841	Pelodiscus_sinensis
ENSDARG00000095904	prpf31	100	83.607	ENSPMGG00000012045	prpf31	100	83.607	Periophthalmus_magnuspinnatus
ENSDARG00000095904	prpf31	91	81.290	ENSPEMG00000011678	Prpf31	99	78.501	Peromyscus_maniculatus_bairdii
ENSDARG00000095904	prpf31	91	86.177	ENSPCIG00000014820	PRPF31	99	82.937	Phascolarctos_cinereus
ENSDARG00000095904	prpf31	99	91.485	ENSPFOG00000008822	prpf31	99	91.485	Poecilia_formosa
ENSDARG00000095904	prpf31	99	90.891	ENSPLAG00000013314	prpf31	99	90.891	Poecilia_latipinna
ENSDARG00000095904	prpf31	99	91.683	ENSPMEG00000017707	prpf31	99	91.683	Poecilia_mexicana
ENSDARG00000095904	prpf31	99	91.683	ENSPREG00000007764	prpf31	99	91.683	Poecilia_reticulata
ENSDARG00000095904	prpf31	91	85.345	ENSPPYG00000010371	PRPF31	99	82.213	Pongo_abelii
ENSDARG00000095904	prpf31	91	60.991	ENSPCAG00000011872	PRPF31	99	59.881	Procavia_capensis
ENSDARG00000095904	prpf31	91	85.345	ENSPCOG00000020393	PRPF31	99	82.213	Propithecus_coquereli
ENSDARG00000095904	prpf31	91	85.129	ENSPVAG00000015562	PRPF31	99	82.016	Pteropus_vampyrus
ENSDARG00000095904	prpf31	99	92.079	ENSPNYG00000002232	prpf31	99	90.891	Pundamilia_nyererei
ENSDARG00000095904	prpf31	100	91.961	ENSPNAG00000003485	prpf31	100	91.961	Pygocentrus_nattereri
ENSDARG00000095904	prpf31	91	85.776	ENSRNOG00000061039	Prpf31	99	82.609	Rattus_norvegicus
ENSDARG00000095904	prpf31	91	85.560	ENSRBIG00000034963	PRPF31	99	82.411	Rhinopithecus_bieti
ENSDARG00000095904	prpf31	91	85.560	ENSRROG00000038740	PRPF31	99	82.411	Rhinopithecus_roxellana
ENSDARG00000095904	prpf31	66	30.919	YGR091W	-	73	30.919	Saccharomyces_cerevisiae
ENSDARG00000095904	prpf31	91	85.345	ENSSBOG00000028915	PRPF31	99	82.213	Saimiri_boliviensis_boliviensis
ENSDARG00000095904	prpf31	91	86.177	ENSSHAG00000009065	PRPF31	99	82.937	Sarcophilus_harrisii
ENSDARG00000095904	prpf31	100	92.368	ENSSFOG00015000288	prpf31	100	92.955	Scleropages_formosus
ENSDARG00000095904	prpf31	99	91.881	ENSSMAG00000013211	prpf31	99	91.881	Scophthalmus_maximus
ENSDARG00000095904	prpf31	99	92.871	ENSSDUG00000008360	prpf31	99	92.871	Seriola_dumerili
ENSDARG00000095904	prpf31	100	85.124	ENSSLDG00000002851	prpf31	99	83.960	Seriola_lalandi_dorsalis
ENSDARG00000095904	prpf31	91	86.177	ENSSPUG00000008622	PRPF31	99	82.540	Sphenodon_punctatus
ENSDARG00000095904	prpf31	100	85.950	ENSSPAG00000022547	prpf31	99	86.873	Stegastes_partitus
ENSDARG00000095904	prpf31	91	85.129	ENSSSCG00000003263	PRPF31	99	82.016	Sus_scrofa
ENSDARG00000095904	prpf31	99	90.693	ENSTRUG00000015769	prpf31	99	90.693	Takifugu_rubripes
ENSDARG00000095904	prpf31	99	91.287	ENSTNIG00000008083	prpf31	99	91.287	Tetraodon_nigroviridis
ENSDARG00000095904	prpf31	91	73.548	ENSTTRG00000006566	PRPF31	99	71.400	Tursiops_truncatus
ENSDARG00000095904	prpf31	91	85.560	ENSUAMG00000005241	PRPF31	99	82.411	Ursus_americanus
ENSDARG00000095904	prpf31	91	85.560	ENSUMAG00000011212	PRPF31	99	82.411	Ursus_maritimus
ENSDARG00000095904	prpf31	91	85.560	ENSVVUG00000008257	PRPF31	99	82.411	Vulpes_vulpes
ENSDARG00000095904	prpf31	91	86.393	ENSXETG00000010916	prpf31	99	82.283	Xenopus_tropicalis
ENSDARG00000095904	prpf31	99	90.297	ENSXCOG00000019456	prpf31	100	90.297	Xiphophorus_couchianus
ENSDARG00000095904	prpf31	99	91.287	ENSXMAG00000012272	prpf31	100	91.287	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000244	spliceosomal tri-snRNP complex assembly	-	IEA	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	IEA	Process
GO:0000398	mRNA splicing, via spliceosome	21801444.	IMP	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISS	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005687	U4 snRNP	21873635.	IBA	Component
GO:0005690	U4atac snRNP	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0030622	U4atac snRNA binding	-	ISS	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	-	IEA	Component
GO:0046540	U4/U6 x U5 tri-snRNP complex	-	ISS	Component
GO:0060041	retina development in camera-type eye	21051334.	IMP	Process
GO:0071005	U2-type precatalytic spliceosome	-	ISS	Component
GO:0071339	MLL1 complex	-	ISS	Component