EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000096189 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-54j5.2
Alias: -
Full Name: si:dkey-54j5.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 22040 bases
Position: chr4:43048527-43070566
Accession: ZDB-GENE-110913-53
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	1	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	2	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	3	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	4	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	5	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	6	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	7	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	8	9
ENSDARP00000125494	zf-C2H2	PF00096.26	9.9e-59	9	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	1	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	2	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	3	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	4	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	5	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	6	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	7	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	8	9
ENSDARP00000156960	zf-C2H2	PF00096.26	9.9e-59	9	9
ENSDARP00000125494	zf-met	PF12874.7	5e-10	1	1
ENSDARP00000156960	zf-met	PF12874.7	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000183779	-	1080	XM_017355709	ENSDARP00000156960	359 (aa)	XP_017211198	H0WF63
ENSDART00000150269	-	1862	-	ENSDARP00000125494	359 (aa)	-	H0WF63

Gene Model

Click here to download ENSDARG00000096189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000096189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000096189	si:dkey-54j5.2	91	62.941	ENSDARG00000113626	znf976	95	62.941
ENSDARG00000096189	si:dkey-54j5.2	99	69.171	ENSDARG00000110229	zgc:173702	99	68.912
ENSDARG00000096189	si:dkey-54j5.2	99	69.337	ENSDARG00000115655	znf1078	99	69.337
ENSDARG00000096189	si:dkey-54j5.2	98	61.111	ENSDARG00000093994	znf1058	100	60.837
ENSDARG00000096189	si:dkey-54j5.2	99	68.325	ENSDARG00000096041	si:ch211-162i8.2	99	67.876
ENSDARG00000096189	si:dkey-54j5.2	91	60.156	ENSDARG00000116177	znf1127	92	64.607
ENSDARG00000096189	si:dkey-54j5.2	99	68.286	ENSDARG00000104407	BX649453.1	99	68.031
ENSDARG00000096189	si:dkey-54j5.2	100	97.214	ENSDARG00000100001	znf1096	100	97.214
ENSDARG00000096189	si:dkey-54j5.2	100	81.894	ENSDARG00000114437	zgc:173705	100	81.894
ENSDARG00000096189	si:dkey-54j5.2	99	69.296	ENSDARG00000112103	si:dkey-16p19.1	100	69.577
ENSDARG00000096189	si:dkey-54j5.2	99	71.074	ENSDARG00000116216	znf1046	95	71.074
ENSDARG00000096189	si:dkey-54j5.2	99	58.234	ENSDARG00000086449	znf1055	99	60.859
ENSDARG00000096189	si:dkey-54j5.2	99	68.675	ENSDARG00000111550	CABZ01002702.1	99	70.683
ENSDARG00000096189	si:dkey-54j5.2	99	67.277	ENSDARG00000100842	si:ch211-223a21.4	99	66.839
ENSDARG00000096189	si:dkey-54j5.2	99	68.394	ENSDARG00000090160	zgc:173709	99	68.135
ENSDARG00000096189	si:dkey-54j5.2	99	47.527	ENSDARG00000103244	CABZ01081752.3	93	47.527
ENSDARG00000096189	si:dkey-54j5.2	100	96.657	ENSDARG00000105137	zgc:173705	100	96.657
ENSDARG00000096189	si:dkey-54j5.2	92	57.364	ENSDARG00000116920	BX465848.2	91	60.405
ENSDARG00000096189	si:dkey-54j5.2	99	69.859	ENSDARG00000103721	si:dkey-122c11.7	100	69.859
ENSDARG00000096189	si:dkey-54j5.2	99	62.530	ENSDARG00000104074	znf1052	99	63.007
ENSDARG00000096189	si:dkey-54j5.2	99	68.135	ENSDARG00000105306	si:dkeyp-44b5.5	99	67.876
ENSDARG00000096189	si:dkey-54j5.2	92	58.754	ENSDARG00000098536	si:dkey-25i10.1	100	58.754
ENSDARG00000096189	si:dkey-54j5.2	99	58.500	ENSDARG00000110852	znf1111	100	54.039
ENSDARG00000096189	si:dkey-54j5.2	99	43.646	ENSDARG00000089715	si:cabz01054394.7	94	43.646
ENSDARG00000096189	si:dkey-54j5.2	99	68.325	ENSDARG00000094558	si:dkeyp-53e4.1	99	67.876
ENSDARG00000096189	si:dkey-54j5.2	100	96.100	ENSDARG00000112725	si:dkey-22h13.2	100	96.100
ENSDARG00000096189	si:dkey-54j5.2	99	63.484	ENSDARG00000092938	znf1047	85	60.056
ENSDARG00000096189	si:dkey-54j5.2	99	69.663	ENSDARG00000114793	CU182823.4	98	69.944
ENSDARG00000096189	si:dkey-54j5.2	87	64.952	ENSDARG00000100653	si:dkeyp-82b4.6	98	64.952
ENSDARG00000096189	si:dkey-54j5.2	99	55.467	ENSDARG00000088000	znf1057	99	64.062
ENSDARG00000096189	si:dkey-54j5.2	99	52.574	ENSDARG00000092507	znf1013	97	52.632
ENSDARG00000096189	si:dkey-54j5.2	99	63.723	ENSDARG00000102600	CABZ01003344.1	85	60.335
ENSDARG00000096189	si:dkey-54j5.2	99	50.515	ENSDARG00000074365	zgc:171901	100	64.198
ENSDARG00000096189	si:dkey-54j5.2	99	68.785	ENSDARG00000101327	znf1076	99	68.785
ENSDARG00000096189	si:dkey-54j5.2	99	60.780	ENSDARG00000091477	znf1066	100	65.352
ENSDARG00000096189	si:dkey-54j5.2	99	62.530	ENSDARG00000089814	znf1042	99	69.858
ENSDARG00000096189	si:dkey-54j5.2	99	48.767	ENSDARG00000096856	znf1012	100	48.767
ENSDARG00000096189	si:dkey-54j5.2	99	61.084	ENSDARG00000111465	znf1104	97	61.856
ENSDARG00000096189	si:dkey-54j5.2	99	71.986	ENSDARG00000098270	znf1053	99	71.986
ENSDARG00000096189	si:dkey-54j5.2	99	61.582	ENSDARG00000102561	AL645691.1	97	68.927
ENSDARG00000096189	si:dkey-54j5.2	99	64.962	ENSDARG00000100961	zgc:174653	100	58.152
ENSDARG00000096189	si:dkey-54j5.2	99	70.994	ENSDARG00000098196	znf1077	99	70.994
ENSDARG00000096189	si:dkey-54j5.2	99	63.484	ENSDARG00000091994	znf1048	99	61.098
ENSDARG00000096189	si:dkey-54j5.2	99	58.105	ENSDARG00000105067	znf1043	99	62.500
ENSDARG00000096189	si:dkey-54j5.2	99	71.084	ENSDARG00000102008	si:dkey-72l17.6	100	71.268
ENSDARG00000096189	si:dkey-54j5.2	99	59.318	ENSDARG00000098901	CABZ01002768.1	100	58.530
ENSDARG00000096189	si:dkey-54j5.2	99	57.576	ENSDARG00000114396	znf1017	98	47.091
ENSDARG00000096189	si:dkey-54j5.2	99	62.919	ENSDARG00000098071	znf1049	100	61.483
ENSDARG00000096189	si:dkey-54j5.2	87	75.845	ENSDARG00000112606	BX248128.2	99	75.845
ENSDARG00000096189	si:dkey-54j5.2	99	51.268	ENSDARG00000109255	si:ch211-234c11.2	99	51.268
ENSDARG00000096189	si:dkey-54j5.2	99	52.402	ENSDARG00000074298	znf1015	100	51.282
ENSDARG00000096189	si:dkey-54j5.2	91	68.072	ENSDARG00000095605	CR846087.3	99	68.072
ENSDARG00000096189	si:dkey-54j5.2	99	50.943	ENSDARG00000086223	si:ch73-144d13.4	100	50.943
ENSDARG00000096189	si:dkey-54j5.2	99	70.391	ENSDARG00000098087	si:dkey-30f3.2	99	68.715
ENSDARG00000096189	si:dkey-54j5.2	92	59.050	ENSDARG00000100509	si:dkey-82i20.2	100	59.050
ENSDARG00000096189	si:dkey-54j5.2	99	69.577	ENSDARG00000113808	si:dkeyp-82b4.6	96	69.577
ENSDARG00000096189	si:dkey-54j5.2	99	53.352	ENSDARG00000098991	znf1095	98	54.366
ENSDARG00000096189	si:dkey-54j5.2	99	68.586	ENSDARG00000103636	zgc:173702	99	68.394
ENSDARG00000096189	si:dkey-54j5.2	99	60.736	ENSDARG00000102027	si:dkey-172k15.11	96	60.736
ENSDARG00000096189	si:dkey-54j5.2	100	97.493	ENSDARG00000115450	CABZ01012382.1	100	97.493
ENSDARG00000096189	si:dkey-54j5.2	99	63.636	ENSDARG00000101137	znf999	99	75.962
ENSDARG00000096189	si:dkey-54j5.2	99	69.337	ENSDARG00000099736	CABZ01075078.1	99	69.337
ENSDARG00000096189	si:dkey-54j5.2	99	72.695	ENSDARG00000103310	znf1053	99	72.695
ENSDARG00000096189	si:dkey-54j5.2	99	70.718	ENSDARG00000114947	BX465848.1	99	70.718
ENSDARG00000096189	si:dkey-54j5.2	92	79.154	ENSDARG00000103495	zgc:173714	100	79.154
ENSDARG00000096189	si:dkey-54j5.2	99	62.530	ENSDARG00000098986	znf1040	99	62.053
ENSDARG00000096189	si:dkey-54j5.2	99	69.553	ENSDARG00000110658	zgc:174696	99	69.553
ENSDARG00000096189	si:dkey-54j5.2	99	47.123	ENSDARG00000090942	CABZ01054394.1	98	47.123
ENSDARG00000096189	si:dkey-54j5.2	99	68.325	ENSDARG00000102673	si:dkey-26i24.1	99	68.135
ENSDARG00000096189	si:dkey-54j5.2	99	71.229	ENSDARG00000102791	zgc:174704	99	69.274
ENSDARG00000096189	si:dkey-54j5.2	99	47.253	ENSDARG00000102800	CABZ01081752.2	93	47.802
ENSDARG00000096189	si:dkey-54j5.2	99	69.372	ENSDARG00000103471	si:dkey-199m13.4	99	68.912
ENSDARG00000096189	si:dkey-54j5.2	100	95.822	ENSDARG00000109381	CU457778.2	100	95.822
ENSDARG00000096189	si:dkey-54j5.2	99	69.890	ENSDARG00000098430	znf1078	99	69.890
ENSDARG00000096189	si:dkey-54j5.2	98	53.750	ENSDARG00000097812	si:ch73-144d13.5	99	53.750
ENSDARG00000096189	si:dkey-54j5.2	99	60.859	ENSDARG00000096210	znf1050	99	63.962
ENSDARG00000096189	si:dkey-54j5.2	100	62.077	ENSDARG00000076272	znf1041	100	70.318
ENSDARG00000096189	si:dkey-54j5.2	99	51.685	ENSDARG00000087168	si:ch211-162i8.4	98	51.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000096189	si:dkey-54j5.2	76	54.945	ENSGMOG00000020024	-	100	54.945	Gadus_morhua
ENSDARG00000096189	si:dkey-54j5.2	73	48.889	ENSGAFG00000013839	-	50	40.580	Gambusia_affinis
ENSDARG00000096189	si:dkey-54j5.2	76	45.385	ENSKMAG00000014002	si:ch211-79k12.2	51	38.415	Kryptolebias_marmoratus
ENSDARG00000096189	si:dkey-54j5.2	99	38.798	ENSKMAG00000011441	-	83	38.798	Kryptolebias_marmoratus
ENSDARG00000096189	si:dkey-54j5.2	99	36.000	ENSORLG00000012434	znf1064	77	36.729	Oryzias_latipes
ENSDARG00000096189	si:dkey-54j5.2	93	36.090	ENSORLG00015013828	-	69	36.090	Oryzias_latipes_hsok
ENSDARG00000096189	si:dkey-54j5.2	76	44.248	ENSORLG00015010409	-	59	49.020	Oryzias_latipes_hsok
ENSDARG00000096189	si:dkey-54j5.2	75	49.000	ENSPFOG00000005998	-	50	49.000	Poecilia_formosa
ENSDARG00000096189	si:dkey-54j5.2	87	41.736	ENSPLAG00000009861	-	53	41.202	Poecilia_latipinna
ENSDARG00000096189	si:dkey-54j5.2	99	43.386	ENSPLAG00000023537	-	93	43.386	Poecilia_latipinna
ENSDARG00000096189	si:dkey-54j5.2	76	43.243	ENSPLAG00000010547	-	53	43.243	Poecilia_latipinna
ENSDARG00000096189	si:dkey-54j5.2	89	51.152	ENSPREG00000005015	-	97	51.152	Poecilia_reticulata
ENSDARG00000096189	si:dkey-54j5.2	78	48.780	ENSXETG00000031310	-	55	50.761	Xenopus_tropicalis
ENSDARG00000096189	si:dkey-54j5.2	68	44.898	ENSXCOG00000015435	-	81	44.898	Xiphophorus_couchianus
ENSDARG00000096189	si:dkey-54j5.2	99	42.953	ENSXMAG00000024816	-	52	42.953	Xiphophorus_maculatus