EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000097215 (Gene tree)
Gene ID: 100149413
Gene Symbol: si:dkey-172k15.3
Alias: -
Full Name: si:dkey-172k15.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8156 bases
Position: chr4:77229328-77237483
Accession: ZDB-GENE-131121-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	1	6
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	2	6
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	3	6
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	4	6
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	5	6
ENSDARP00000133975	zf-C2H2	PF00096.26	5.8e-28	6	6
ENSDARP00000128538	zf-C2H2	PF00096.26	7.3e-21	1	4
ENSDARP00000128538	zf-C2H2	PF00096.26	7.3e-21	2	4
ENSDARP00000128538	zf-C2H2	PF00096.26	7.3e-21	3	4
ENSDARP00000128538	zf-C2H2	PF00096.26	7.3e-21	4	4
ENSDARP00000128538	zf-met	PF12874.7	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000154142	-	2324	XM_005164966	ENSDARP00000133975	230 (aa)	XP_005165023	A0A0R4IIX8
ENSDART00000155070	-	1285	XM_001922466	ENSDARP00000128538	232 (aa)	XP_001922501	X1WE87

Gene Model

Click here to download ENSDARG00000097215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000097215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000097215	si:dkey-172k15.3	99	49.565	ENSDARG00000053695	zgc:162948	98	49.565
ENSDARG00000097215	si:dkey-172k15.3	89	47.253	ENSDARG00000113837	LO018029.2	90	44.565