EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000097612 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-24l11.2
Alias: -
Full Name: si:dkey-24l11.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 14261 bases
Position: chr18:26880472-26894732
Accession: ZDB-GENE-050419-208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000121380	zf-CCCH	PF00642.24	4e-08	1	2
ENSDARP00000121380	zf-CCCH	PF00642.24	4e-08	2	2
ENSDARP00000121380	zf-CCCH_2	PF14608.6	2.2e-05	1	2
ENSDARP00000121380	zf-CCCH_2	PF14608.6	2.2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147735	-	823	-	ENSDARP00000121380	240 (aa)	-	Q1LX58
ENSDART00000136186	-	420	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000097612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000097612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000097612	si:dkey-24l11.2	96	42.424	ENSORLG00000007981	-	50	43.348	Oryzias_latipes
ENSDARG00000097612	si:dkey-24l11.2	93	47.009	ENSOMEG00000023279	-	50	47.009	Oryzias_melastigma
ENSDARG00000097612	si:dkey-24l11.2	100	52.964	ENSPNAG00000001676	si:dkey-24l11.2	51	56.356	Pygocentrus_nattereri