EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000097770 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-167j9.4
Alias: -
Full Name: si:ch211-167j9.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2039 bases
Position: chr15:23799461-23801499
Accession: ZDB-GENE-131121-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128771	RVT_1	PF00078.27	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000154885	-	2039	-	ENSDARP00000128771	569 (aa)	-	X1WEW9

Gene Model

Click here to download ENSDARG00000097770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000097770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000097770	si:ch211-167j9.4	95	40.147	ENSDARG00000100538	si:dkeyp-88h4.2	69	40.147
ENSDARG00000097770	si:ch211-167j9.4	96	38.448	ENSDARG00000098557	BX323564.1	57	38.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000097770	si:ch211-167j9.4	98	36.842	ENSACLG00000005544	-	51	36.842	Astatotilapia_calliptera
ENSDARG00000097770	si:ch211-167j9.4	97	44.283	ENSACLG00000013994	-	90	44.283	Astatotilapia_calliptera
ENSDARG00000097770	si:ch211-167j9.4	55	45.833	ENSHBUG00000009853	-	89	45.833	Haplochromis_burtoni
ENSDARG00000097770	si:ch211-167j9.4	56	50.464	ENSKMAG00000001475	-	57	50.464	Kryptolebias_marmoratus
ENSDARG00000097770	si:ch211-167j9.4	86	41.093	ENSKMAG00000018235	-	52	41.093	Kryptolebias_marmoratus
ENSDARG00000097770	si:ch211-167j9.4	96	42.266	ENSMZEG00005001249	-	80	42.266	Maylandia_zebra
ENSDARG00000097770	si:ch211-167j9.4	98	40.998	ENSORLG00000026021	-	66	40.998	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	51	44.444	ENSORLG00000022221	-	76	44.444	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	96	36.757	ENSORLG00000026865	-	51	36.757	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	98	37.634	ENSORLG00000028041	-	58	37.634	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	98	42.143	ENSORLG00000030108	-	55	42.143	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	59	43.114	ENSORLG00000023710	-	61	43.114	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	98	40.642	ENSORLG00000022810	-	51	40.642	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	99	38.120	ENSORLG00000027119	-	52	38.120	Oryzias_latipes
ENSDARG00000097770	si:ch211-167j9.4	97	36.316	ENSORLG00020004920	-	82	36.316	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	96	35.971	ENSORLG00020018783	-	55	35.971	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	97	36.833	ENSORLG00020009704	-	91	36.833	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	98	37.937	ENSORLG00020006818	-	63	37.937	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	96	32.918	ENSORLG00020007503	-	82	32.918	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	99	37.607	ENSORLG00020021090	-	64	37.607	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	98	37.809	ENSORLG00020008557	-	51	37.809	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	98	37.809	ENSORLG00020010329	-	86	37.809	Oryzias_latipes_hni
ENSDARG00000097770	si:ch211-167j9.4	99	36.473	ENSORLG00015007293	-	76	36.473	Oryzias_latipes_hsok
ENSDARG00000097770	si:ch211-167j9.4	76	40.541	ENSORLG00015001172	-	66	40.541	Oryzias_latipes_hsok
ENSDARG00000097770	si:ch211-167j9.4	99	33.391	ENSOMEG00000015408	-	52	33.391	Oryzias_melastigma
ENSDARG00000097770	si:ch211-167j9.4	99	41.986	ENSOMEG00000003915	-	78	41.986	Oryzias_melastigma
ENSDARG00000097770	si:ch211-167j9.4	98	37.324	ENSOMEG00000003087	-	85	37.324	Oryzias_melastigma
ENSDARG00000097770	si:ch211-167j9.4	98	38.380	ENSPMEG00000007764	-	92	38.380	Poecilia_mexicana
ENSDARG00000097770	si:ch211-167j9.4	98	38.204	ENSXMAG00000026019	-	51	38.204	Xiphophorus_maculatus