EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000097803 (Gene tree)
Gene ID: 100004874
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 36465 bases
Position: chr5:69747417-69783881
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128821	RF-1	PF00472.20	3e-23	1	1
ENSDARP00000129767	RF-1	PF00472.20	4.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000153717	-	796	XM_009302033	ENSDARP00000128821	137 (aa)	XP_009300308	Z4YJA1
ENSDART00000154507	-	1007	-	ENSDARP00000129767	156 (aa)	-	A5WUX7

Gene Model

Click here to download ENSDARG00000097803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000097803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000097803	si:ch211-275j6.5	74	65.347	ENSG00000130921	C12orf65	69	68.421	Homo_sapiens
ENSDARG00000097803	si:ch211-275j6.5	94	66.667	ENSAPOG00000000995	si:ch211-275j6.5	97	61.875	Acanthochromis_polyacanthus
ENSDARG00000097803	si:ch211-275j6.5	65	62.766	ENSAMEG00000015144	C12orf65	81	55.385	Ailuropoda_melanoleuca
ENSDARG00000097803	si:ch211-275j6.5	98	68.657	ENSACIG00000001644	si:ch211-275j6.5	83	68.657	Amphilophus_citrinellus
ENSDARG00000097803	si:ch211-275j6.5	94	71.756	ENSAOCG00000005589	si:ch211-275j6.5	94	66.892	Amphiprion_ocellaris
ENSDARG00000097803	si:ch211-275j6.5	94	71.756	ENSAPEG00000024618	si:ch211-275j6.5	97	62.893	Amphiprion_percula
ENSDARG00000097803	si:ch211-275j6.5	93	70.079	ENSATEG00000011661	si:ch211-275j6.5	68	70.079	Anabas_testudineus
ENSDARG00000097803	si:ch211-275j6.5	85	65.812	ENSAPLG00000016073	C12orf65	98	65.812	Anas_platyrhynchos
ENSDARG00000097803	si:ch211-275j6.5	96	61.364	ENSACAG00000015561	C12orf65	65	61.364	Anolis_carolinensis
ENSDARG00000097803	si:ch211-275j6.5	61	70.238	ENSANAG00000022881	C12orf65	72	61.864	Aotus_nancymaae
ENSDARG00000097803	si:ch211-275j6.5	91	73.810	ENSACLG00000023906	si:ch211-275j6.5	95	65.161	Astatotilapia_calliptera
ENSDARG00000097803	si:ch211-275j6.5	82	75.221	ENSAMXG00000031765	si:ch211-275j6.5	82	68.657	Astyanax_mexicanus
ENSDARG00000097803	si:ch211-275j6.5	87	60.504	ENSBTAG00000020503	C17H12orf65	69	60.504	Bos_taurus
ENSDARG00000097803	si:ch211-275j6.5	65	67.033	ENSCJAG00000016579	C12orf65	76	60.000	Callithrix_jacchus
ENSDARG00000097803	si:ch211-275j6.5	61	73.494	ENSCAFG00000007512	C26H12orf65	50	61.667	Canis_familiaris
ENSDARG00000097803	si:ch211-275j6.5	64	70.115	ENSCAFG00020016169	C12orf65	72	61.667	Canis_lupus_dingo
ENSDARG00000097803	si:ch211-275j6.5	87	61.345	ENSCHIG00000022229	C12orf65	67	61.345	Capra_hircus
ENSDARG00000097803	si:ch211-275j6.5	73	62.376	ENSCAPG00000014691	C12orf65	71	56.716	Cavia_aperea
ENSDARG00000097803	si:ch211-275j6.5	71	63.918	ENSCPOG00000007583	C12orf65	71	56.716	Cavia_porcellus
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSCATG00000040685	C12orf65	75	59.350	Cercocebus_atys
ENSDARG00000097803	si:ch211-275j6.5	71	61.856	ENSCLAG00000014329	C12orf65	68	56.349	Chinchilla_lanigera
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSCSAG00000002068	C12orf65	73	59.350	Chlorocebus_sabaeus
ENSDARG00000097803	si:ch211-275j6.5	93	59.843	ENSCPBG00000025970	C12orf65	75	59.843	Chrysemys_picta_bellii
ENSDARG00000097803	si:ch211-275j6.5	68	67.021	ENSCGRG00001013424	2810006K23Rik	68	56.000	Cricetulus_griseus_chok1gshd
ENSDARG00000097803	si:ch211-275j6.5	68	67.021	ENSCGRG00000003037	2810006K23Rik	68	56.000	Cricetulus_griseus_crigri
ENSDARG00000097803	si:ch211-275j6.5	88	64.463	ENSCSEG00000014536	si:ch211-275j6.5	72	64.463	Cynoglossus_semilaevis
ENSDARG00000097803	si:ch211-275j6.5	94	70.370	ENSCVAG00000023000	si:ch211-275j6.5	98	60.843	Cyprinodon_variegatus
ENSDARG00000097803	si:ch211-275j6.5	56	68.831	ENSDNOG00000034728	C12orf65	66	57.798	Dasypus_novemcinctus
ENSDARG00000097803	si:ch211-275j6.5	71	63.918	ENSDORG00000026069	2810006K23Rik	72	57.143	Dipodomys_ordii
ENSDARG00000097803	si:ch211-275j6.5	68	51.613	FBgn0050100	CG30100	64	51.613	Drosophila_melanogaster
ENSDARG00000097803	si:ch211-275j6.5	60	73.171	ENSEASG00005012587	C12orf65	71	62.712	Equus_asinus_asinus
ENSDARG00000097803	si:ch211-275j6.5	60	73.171	ENSECAG00000001057	C8H12orf65	71	62.712	Equus_caballus
ENSDARG00000097803	si:ch211-275j6.5	60	73.171	ENSEEUG00000007231	C12orf65	71	61.864	Erinaceus_europaeus
ENSDARG00000097803	si:ch211-275j6.5	91	73.228	ENSELUG00000015178	lg13h12orf65	96	62.346	Esox_lucius
ENSDARG00000097803	si:ch211-275j6.5	54	74.324	ENSFCAG00000015328	C12orf65	66	61.818	Felis_catus
ENSDARG00000097803	si:ch211-275j6.5	70	68.750	ENSFALG00000009261	C12orf65	84	59.124	Ficedula_albicollis
ENSDARG00000097803	si:ch211-275j6.5	94	74.809	ENSFHEG00000017567	si:ch211-275j6.5	92	67.089	Fundulus_heteroclitus
ENSDARG00000097803	si:ch211-275j6.5	89	72.131	ENSGMOG00000012139	si:ch211-275j6.5	82	72.131	Gadus_morhua
ENSDARG00000097803	si:ch211-275j6.5	96	59.848	ENSGALG00000029390	C15H12ORF65	95	53.205	Gallus_gallus
ENSDARG00000097803	si:ch211-275j6.5	87	72.269	ENSGACG00000008255	si:ch211-275j6.5	75	72.269	Gasterosteus_aculeatus
ENSDARG00000097803	si:ch211-275j6.5	66	67.778	ENSGAGG00000000823	C12orf65	72	63.208	Gopherus_agassizii
ENSDARG00000097803	si:ch211-275j6.5	74	65.347	ENSGGOG00000012850	C12orf65	71	61.864	Gorilla_gorilla
ENSDARG00000097803	si:ch211-275j6.5	91	73.810	ENSHBUG00000007273	si:ch211-275j6.5	95	65.161	Haplochromis_burtoni
ENSDARG00000097803	si:ch211-275j6.5	66	66.667	ENSHGLG00000010966	C12orf65	68	57.143	Heterocephalus_glaber_female
ENSDARG00000097803	si:ch211-275j6.5	66	66.667	ENSHGLG00100018631	C12orf65	68	57.143	Heterocephalus_glaber_male
ENSDARG00000097803	si:ch211-275j6.5	98	66.418	ENSHCOG00000019848	si:ch211-275j6.5	79	66.418	Hippocampus_comes
ENSDARG00000097803	si:ch211-275j6.5	96	72.180	ENSIPUG00000020793	si:ch211-275j6.5	84	70.290	Ictalurus_punctatus
ENSDARG00000097803	si:ch211-275j6.5	77	64.151	ENSSTOG00000016463	C12orf65	71	60.163	Ictidomys_tridecemlineatus
ENSDARG00000097803	si:ch211-275j6.5	86	57.627	ENSJJAG00000023360	2810006K23Rik	63	57.627	Jaculus_jaculus
ENSDARG00000097803	si:ch211-275j6.5	91	75.200	ENSKMAG00000018733	si:ch211-275j6.5	77	75.200	Kryptolebias_marmoratus
ENSDARG00000097803	si:ch211-275j6.5	88	63.636	ENSLACG00000017355	C12orf65	73	63.636	Latimeria_chalumnae
ENSDARG00000097803	si:ch211-275j6.5	88	68.595	ENSLOCG00000005702	si:ch211-275j6.5	100	68.595	Lepisosteus_oculatus
ENSDARG00000097803	si:ch211-275j6.5	83	63.158	ENSLAFG00000002134	C12orf65	69	63.158	Loxodonta_africana
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSMMUG00000031495	C12orf65	75	59.350	Macaca_mulatta
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSMNEG00000044673	C12orf65	75	60.163	Macaca_nemestrina
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSMLEG00000044309	C12orf65	75	59.350	Mandrillus_leucophaeus
ENSDARG00000097803	si:ch211-275j6.5	96	72.180	ENSMAMG00000017366	si:ch211-275j6.5	95	61.491	Mastacembelus_armatus
ENSDARG00000097803	si:ch211-275j6.5	91	73.810	ENSMZEG00005000938	si:ch211-275j6.5	95	63.462	Maylandia_zebra
ENSDARG00000097803	si:ch211-275j6.5	85	65.517	ENSMGAG00000003354	C12orf65	85	65.517	Meleagris_gallopavo
ENSDARG00000097803	si:ch211-275j6.5	63	66.279	ENSMAUG00000010304	2810006K23Rik	59	66.279	Mesocricetus_auratus
ENSDARG00000097803	si:ch211-275j6.5	66	67.778	ENSMICG00000037138	C12orf65	74	60.163	Microcebus_murinus
ENSDARG00000097803	si:ch211-275j6.5	66	67.391	ENSMOCG00000017477	2810006K23Rik	68	56.000	Microtus_ochrogaster
ENSDARG00000097803	si:ch211-275j6.5	96	68.657	ENSMMOG00000017134	si:ch211-275j6.5	95	59.119	Mola_mola
ENSDARG00000097803	si:ch211-275j6.5	85	59.829	ENSMODG00000012450	C12orf65	83	53.741	Monodelphis_domestica
ENSDARG00000097803	si:ch211-275j6.5	93	71.538	ENSMALG00000012291	si:ch211-275j6.5	95	60.625	Monopterus_albus
ENSDARG00000097803	si:ch211-275j6.5	68	64.516	MGP_CAROLIEiJ_G0027747	2810006K23Rik	68	55.200	Mus_caroli
ENSDARG00000097803	si:ch211-275j6.5	68	65.957	ENSMUSG00000047635	2810006K23Rik	68	55.200	Mus_musculus
ENSDARG00000097803	si:ch211-275j6.5	68	65.957	MGP_SPRETEiJ_G0028745	2810006K23Rik	68	55.200	Mus_spretus
ENSDARG00000097803	si:ch211-275j6.5	78	62.617	ENSMPUG00000001679	C12orf65	70	59.350	Mustela_putorius_furo
ENSDARG00000097803	si:ch211-275j6.5	92	52.381	ENSMLUG00000007001	C12orf65	76	52.381	Myotis_lucifugus
ENSDARG00000097803	si:ch211-275j6.5	91	57.600	ENSNGAG00000010625	2810006K23Rik	68	58.537	Nannospalax_galili
ENSDARG00000097803	si:ch211-275j6.5	93	72.441	ENSNBRG00000008082	si:ch211-275j6.5	78	72.441	Neolamprologus_brichardi
ENSDARG00000097803	si:ch211-275j6.5	74	65.347	ENSNLEG00000001470	C12orf65	71	61.864	Nomascus_leucogenys
ENSDARG00000097803	si:ch211-275j6.5	84	61.739	ENSMEUG00000009430	C12orf65	90	54.483	Notamacropus_eugenii
ENSDARG00000097803	si:ch211-275j6.5	89	55.738	ENSOPRG00000011029	C12orf65	76	55.738	Ochotona_princeps
ENSDARG00000097803	si:ch211-275j6.5	92	54.688	ENSODEG00000011382	-	86	49.333	Octodon_degus
ENSDARG00000097803	si:ch211-275j6.5	92	74.603	ENSONIG00000013298	si:ch211-275j6.5	75	74.603	Oreochromis_niloticus
ENSDARG00000097803	si:ch211-275j6.5	92	62.016	ENSOANG00000012866	C12orf65	75	62.016	Ornithorhynchus_anatinus
ENSDARG00000097803	si:ch211-275j6.5	64	67.816	ENSOCUG00000011888	C12orf65	71	58.824	Oryctolagus_cuniculus
ENSDARG00000097803	si:ch211-275j6.5	85	74.359	ENSORLG00000006153	si:ch211-275j6.5	92	63.871	Oryzias_latipes
ENSDARG00000097803	si:ch211-275j6.5	87	73.109	ENSORLG00020017188	si:ch211-275j6.5	93	63.057	Oryzias_latipes_hni
ENSDARG00000097803	si:ch211-275j6.5	85	74.359	ENSORLG00015005780	c9h12orf65	92	63.871	Oryzias_latipes_hsok
ENSDARG00000097803	si:ch211-275j6.5	85	74.359	ENSOMEG00000001663	si:ch211-275j6.5	91	61.438	Oryzias_melastigma
ENSDARG00000097803	si:ch211-275j6.5	64	64.773	ENSOGAG00000010778	C12orf65	74	57.851	Otolemur_garnettii
ENSDARG00000097803	si:ch211-275j6.5	87	59.664	ENSOARG00000005214	C12orf65	70	59.664	Ovis_aries
ENSDARG00000097803	si:ch211-275j6.5	74	65.347	ENSPPAG00000029654	C12orf65	71	61.864	Pan_paniscus
ENSDARG00000097803	si:ch211-275j6.5	82	60.714	ENSPPRG00000024772	C12orf65	66	61.818	Panthera_pardus
ENSDARG00000097803	si:ch211-275j6.5	82	60.714	ENSPTIG00000011744	C12orf65	66	61.818	Panthera_tigris_altaica
ENSDARG00000097803	si:ch211-275j6.5	74	64.706	ENSPTRG00000005595	C12H12orf65	71	61.864	Pan_troglodytes
ENSDARG00000097803	si:ch211-275j6.5	65	67.416	ENSPANG00000015388	C12orf65	75	59.350	Papio_anubis
ENSDARG00000097803	si:ch211-275j6.5	98	62.500	ENSPKIG00000001571	si:ch211-275j6.5	84	61.268	Paramormyrops_kingsleyae
ENSDARG00000097803	si:ch211-275j6.5	93	62.205	ENSPSIG00000013010	C12orf65	69	62.205	Pelodiscus_sinensis
ENSDARG00000097803	si:ch211-275j6.5	90	75.610	ENSPMGG00000018342	si:ch211-275j6.5	74	74.603	Periophthalmus_magnuspinnatus
ENSDARG00000097803	si:ch211-275j6.5	76	53.846	ENSPMAG00000000514	si:ch211-275j6.5	94	53.846	Petromyzon_marinus
ENSDARG00000097803	si:ch211-275j6.5	85	59.829	ENSPCIG00000010996	C12orf65	91	50.000	Phascolarctos_cinereus
ENSDARG00000097803	si:ch211-275j6.5	96	71.429	ENSPLAG00000001661	si:ch211-275j6.5	95	62.733	Poecilia_latipinna
ENSDARG00000097803	si:ch211-275j6.5	94	72.519	ENSPMEG00000009201	si:ch211-275j6.5	94	63.522	Poecilia_mexicana
ENSDARG00000097803	si:ch211-275j6.5	94	72.519	ENSPMEG00000018566	si:ch211-275j6.5	94	63.522	Poecilia_mexicana
ENSDARG00000097803	si:ch211-275j6.5	95	69.697	ENSPREG00000021268	si:ch211-275j6.5	93	62.500	Poecilia_reticulata
ENSDARG00000097803	si:ch211-275j6.5	61	71.429	ENSPPYG00000005082	C12orf65	71	61.864	Pongo_abelii
ENSDARG00000097803	si:ch211-275j6.5	56	70.130	ENSPCAG00000016193	C12orf65	66	61.818	Procavia_capensis
ENSDARG00000097803	si:ch211-275j6.5	64	69.318	ENSPCOG00000021574	C12orf65	69	60.163	Propithecus_coquereli
ENSDARG00000097803	si:ch211-275j6.5	87	61.345	ENSPVAG00000015301	C12orf65	83	55.396	Pteropus_vampyrus
ENSDARG00000097803	si:ch211-275j6.5	91	73.810	ENSPNYG00000014456	si:ch211-275j6.5	95	65.161	Pundamilia_nyererei
ENSDARG00000097803	si:ch211-275j6.5	91	70.400	ENSPNAG00000019769	si:ch211-275j6.5	73	70.400	Pygocentrus_nattereri
ENSDARG00000097803	si:ch211-275j6.5	68	67.021	ENSRNOG00000001073	RGD1563482	69	56.800	Rattus_norvegicus
ENSDARG00000097803	si:ch211-275j6.5	61	71.429	ENSRBIG00000040789	C12orf65	71	61.864	Rhinopithecus_bieti
ENSDARG00000097803	si:ch211-275j6.5	61	70.238	ENSRROG00000031384	C12orf65	70	61.017	Rhinopithecus_roxellana
ENSDARG00000097803	si:ch211-275j6.5	61	71.429	ENSSBOG00000026629	C12orf65	74	63.200	Saimiri_boliviensis_boliviensis
ENSDARG00000097803	si:ch211-275j6.5	95	49.375	ENSSHAG00000014988	C12orf65	87	49.367	Sarcophilus_harrisii
ENSDARG00000097803	si:ch211-275j6.5	92	66.667	ENSSFOG00015019122	si:ch211-275j6.5	71	66.667	Scleropages_formosus
ENSDARG00000097803	si:ch211-275j6.5	91	71.429	ENSSMAG00000016770	si:ch211-275j6.5	91	60.736	Scophthalmus_maximus
ENSDARG00000097803	si:ch211-275j6.5	90	69.600	ENSSDUG00000020401	si:ch211-275j6.5	80	69.600	Seriola_dumerili
ENSDARG00000097803	si:ch211-275j6.5	84	73.913	ENSSLDG00000017638	si:ch211-275j6.5	99	56.805	Seriola_lalandi_dorsalis
ENSDARG00000097803	si:ch211-275j6.5	84	62.609	ENSSPUG00000012613	C12orf65	82	54.815	Sphenodon_punctatus
ENSDARG00000097803	si:ch211-275j6.5	91	72.222	ENSSPAG00000023476	si:ch211-275j6.5	95	61.963	Stegastes_partitus
ENSDARG00000097803	si:ch211-275j6.5	74	63.810	ENSSSCG00000009774	C12orf65	71	63.810	Sus_scrofa
ENSDARG00000097803	si:ch211-275j6.5	87	62.185	ENSTGUG00000005440	C12orf65	93	62.185	Taeniopygia_guttata
ENSDARG00000097803	si:ch211-275j6.5	96	70.677	ENSTNIG00000015832	si:ch211-275j6.5	89	63.226	Tetraodon_nigroviridis
ENSDARG00000097803	si:ch211-275j6.5	54	71.429	ENSTBEG00000012500	C12orf65	71	61.864	Tupaia_belangeri
ENSDARG00000097803	si:ch211-275j6.5	75	64.078	ENSTTRG00000015880	C12orf65	67	63.063	Tursiops_truncatus
ENSDARG00000097803	si:ch211-275j6.5	64	68.966	ENSUAMG00000019669	C12orf65	73	60.000	Ursus_americanus
ENSDARG00000097803	si:ch211-275j6.5	64	68.966	ENSUMAG00000004025	C12orf65	75	59.350	Ursus_maritimus
ENSDARG00000097803	si:ch211-275j6.5	64	70.115	ENSVVUG00000027811	C12orf65	72	61.667	Vulpes_vulpes
ENSDARG00000097803	si:ch211-275j6.5	96	69.925	ENSXCOG00000000975	si:ch211-275j6.5	79	69.925	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003747	translation release factor activity	-	IEA	Function
GO:0006415	translational termination	-	IEA	Process