EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000097997 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-272b8.7
Alias: -
Full Name: si:ch211-272b8.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4298 bases
Position: chr15:35130621-35134918
Accession: ZDB-GENE-131119-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000127926	RIO1	PF01163.22	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157196	-	1422	-	ENSDARP00000127926	391 (aa)	-	X1WCI3

Gene Model

Click here to download ENSDARG00000097997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000097997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000097997	si:ch211-272b8.7	69	89.668	ENSDARG00000070692	si:dkey-80c24.1	100	89.668
ENSDARG00000097997	si:ch211-272b8.7	100	89.514	ENSDARG00000101352	si:dkey-34d22.3	90	90.129
ENSDARG00000097997	si:ch211-272b8.7	98	66.970	ENSDARG00000095927	si:ch211-57m13.1	69	67.198
ENSDARG00000097997	si:ch211-272b8.7	100	90.281	ENSDARG00000052677	si:ch211-138g9.2	72	90.281
ENSDARG00000097997	si:ch211-272b8.7	71	89.568	ENSDARG00000094491	si:ch211-202m22.1	99	89.568
ENSDARG00000097997	si:ch211-272b8.7	69	89.668	ENSDARG00000092501	si:dkey-80c24.5	100	89.668
ENSDARG00000097997	si:ch211-272b8.7	100	89.770	ENSDARG00000053340	si:ch211-138g9.3	68	89.770
ENSDARG00000097997	si:ch211-272b8.7	60	90.129	ENSDARG00000114012	CU062431.1	90	90.129
ENSDARG00000097997	si:ch211-272b8.7	59	90.043	ENSDARG00000113783	si:dkeyp-67e1.6	90	90.043
ENSDARG00000097997	si:ch211-272b8.7	71	84.838	ENSDARG00000113513	si:dkeyp-67e1.6	99	84.838
ENSDARG00000097997	si:ch211-272b8.7	100	89.770	ENSDARG00000078558	si:dkey-22i16.10	70	89.770
ENSDARG00000097997	si:ch211-272b8.7	71	85.199	ENSDARG00000073947	si:dkeyp-67e1.6	99	85.199