EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000098087 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-30f3.2
Alias: -
Full Name: si:dkey-30f3.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7260 bases
Position: chr4:63818212-63825471
Accession: ZDB-GENE-110913-70
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	1	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	2	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	3	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	4	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	5	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	6	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	7	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	8	9
ENSDARP00000137519	zf-C2H2	PF00096.26	7.2e-49	9	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	1	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	2	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	3	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	4	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	5	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	6	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	7	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	8	9
ENSDARP00000140372	zf-C2H2	PF00096.26	7.2e-49	9	9
ENSDARP00000137519	zf-met	PF12874.7	0.00011	1	1
ENSDARP00000140372	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164929	-	1667	-	ENSDARP00000140372	331 (aa)	-	A0A0G2KYH8
ENSDART00000161177	-	996	-	ENSDARP00000137519	331 (aa)	-	A0A0G2KYH8

Gene Model

Click here to download ENSDARG00000098087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098087	si:dkey-30f3.2	99	68.605	ENSDARG00000100509	si:dkey-82i20.2	100	68.605
ENSDARG00000098087	si:dkey-30f3.2	99	70.807	ENSDARG00000102008	si:dkey-72l17.6	100	70.642
ENSDARG00000098087	si:dkey-30f3.2	91	63.554	ENSDARG00000095605	CR846087.3	99	61.747
ENSDARG00000098087	si:dkey-30f3.2	100	72.324	ENSDARG00000096041	si:ch211-162i8.2	100	62.402
ENSDARG00000098087	si:dkey-30f3.2	99	55.597	ENSDARG00000104887	znf1105	96	55.597
ENSDARG00000098087	si:dkey-30f3.2	100	72.846	ENSDARG00000103471	si:dkey-199m13.4	100	66.150
ENSDARG00000098087	si:dkey-30f3.2	99	65.986	ENSDARG00000103310	znf1053	99	65.986
ENSDARG00000098087	si:dkey-30f3.2	99	45.509	ENSDARG00000089715	si:cabz01054394.7	96	45.509
ENSDARG00000098087	si:dkey-30f3.2	99	56.731	ENSDARG00000113626	znf976	95	56.731
ENSDARG00000098087	si:dkey-30f3.2	100	73.368	ENSDARG00000110229	zgc:173702	100	66.667
ENSDARG00000098087	si:dkey-30f3.2	99	68.598	ENSDARG00000114793	CU182823.4	98	68.598
ENSDARG00000098087	si:dkey-30f3.2	100	69.804	ENSDARG00000088000	znf1057	100	69.804
ENSDARG00000098087	si:dkey-30f3.2	100	73.725	ENSDARG00000101137	znf999	100	73.725
ENSDARG00000098087	si:dkey-30f3.2	99	70.112	ENSDARG00000109381	CU457778.2	99	71.508
ENSDARG00000098087	si:dkey-30f3.2	99	69.325	ENSDARG00000102561	AL645691.1	97	69.325
ENSDARG00000098087	si:dkey-30f3.2	100	72.585	ENSDARG00000100842	si:ch211-223a21.4	100	62.924
ENSDARG00000098087	si:dkey-30f3.2	92	58.056	ENSDARG00000116920	BX465848.2	91	61.149
ENSDARG00000098087	si:dkey-30f3.2	91	63.636	ENSDARG00000103495	zgc:173714	99	63.030
ENSDARG00000098087	si:dkey-30f3.2	99	45.345	ENSDARG00000075417	zgc:175107	100	45.345
ENSDARG00000098087	si:dkey-30f3.2	100	73.629	ENSDARG00000105306	si:dkeyp-44b5.5	100	66.408
ENSDARG00000098087	si:dkey-30f3.2	99	68.715	ENSDARG00000112725	si:dkey-22h13.2	99	69.832
ENSDARG00000098087	si:dkey-30f3.2	99	70.445	ENSDARG00000093994	znf1058	99	70.445
ENSDARG00000098087	si:dkey-30f3.2	100	67.451	ENSDARG00000086449	znf1055	100	67.451
ENSDARG00000098087	si:dkey-30f3.2	99	80.909	ENSDARG00000110658	zgc:174696	99	80.909
ENSDARG00000098087	si:dkey-30f3.2	99	70.356	ENSDARG00000098071	znf1049	100	70.356
ENSDARG00000098087	si:dkey-30f3.2	99	65.746	ENSDARG00000114947	BX465848.1	99	64.088
ENSDARG00000098087	si:dkey-30f3.2	100	73.333	ENSDARG00000104074	znf1052	100	73.333
ENSDARG00000098087	si:dkey-30f3.2	99	70.079	ENSDARG00000098270	znf1053	99	70.079
ENSDARG00000098087	si:dkey-30f3.2	100	73.107	ENSDARG00000103636	zgc:173702	100	66.150
ENSDARG00000098087	si:dkey-30f3.2	100	74.510	ENSDARG00000096210	znf1050	100	74.510
ENSDARG00000098087	si:dkey-30f3.2	99	68.994	ENSDARG00000105137	zgc:173705	99	70.112
ENSDARG00000098087	si:dkey-30f3.2	100	70.196	ENSDARG00000098986	znf1040	100	70.196
ENSDARG00000098087	si:dkey-30f3.2	100	95.468	ENSDARG00000102791	zgc:174704	100	95.468
ENSDARG00000098087	si:dkey-30f3.2	99	69.231	ENSDARG00000111550	CABZ01002702.1	99	69.231
ENSDARG00000098087	si:dkey-30f3.2	100	61.224	ENSDARG00000104407	BX649453.1	100	56.378
ENSDARG00000098087	si:dkey-30f3.2	99	68.605	ENSDARG00000098536	si:dkey-25i10.1	100	68.605
ENSDARG00000098087	si:dkey-30f3.2	99	72.500	ENSDARG00000102837	znf1145	100	72.500
ENSDARG00000098087	si:dkey-30f3.2	100	71.373	ENSDARG00000116216	znf1046	100	71.373
ENSDARG00000098087	si:dkey-30f3.2	99	50.521	ENSDARG00000074298	znf1015	100	50.420
ENSDARG00000098087	si:dkey-30f3.2	97	48.619	ENSDARG00000096856	znf1012	94	48.980
ENSDARG00000098087	si:dkey-30f3.2	91	60.784	ENSDARG00000116177	znf1127	76	61.775
ENSDARG00000098087	si:dkey-30f3.2	99	51.887	ENSDARG00000103244	CABZ01081752.3	98	51.887
ENSDARG00000098087	si:dkey-30f3.2	86	78.261	ENSDARG00000112606	BX248128.2	99	78.261
ENSDARG00000098087	si:dkey-30f3.2	99	69.113	ENSDARG00000112103	si:dkey-16p19.1	100	69.113
ENSDARG00000098087	si:dkey-30f3.2	100	70.980	ENSDARG00000091994	znf1048	100	70.980
ENSDARG00000098087	si:dkey-30f3.2	99	50.167	ENSDARG00000101365	si:cabz01021430.2	100	52.632
ENSDARG00000098087	si:dkey-30f3.2	100	71.373	ENSDARG00000102600	CABZ01003344.1	100	71.373
ENSDARG00000098087	si:dkey-30f3.2	100	72.585	ENSDARG00000102673	si:dkey-26i24.1	100	75.940
ENSDARG00000098087	si:dkey-30f3.2	99	64.917	ENSDARG00000098430	znf1078	99	62.983
ENSDARG00000098087	si:dkey-30f3.2	85	68.214	ENSDARG00000100653	si:dkeyp-82b4.6	96	68.214
ENSDARG00000098087	si:dkey-30f3.2	99	65.193	ENSDARG00000098196	znf1077	99	64.088
ENSDARG00000098087	si:dkey-30f3.2	99	52.976	ENSDARG00000114396	znf1017	100	47.208
ENSDARG00000098087	si:dkey-30f3.2	99	65.193	ENSDARG00000115655	znf1078	99	63.812
ENSDARG00000098087	si:dkey-30f3.2	99	69.832	ENSDARG00000100001	znf1096	99	71.229
ENSDARG00000098087	si:dkey-30f3.2	100	67.442	ENSDARG00000105067	znf1043	100	67.442
ENSDARG00000098087	si:dkey-30f3.2	99	68.715	ENSDARG00000115450	CABZ01012382.1	99	70.112
ENSDARG00000098087	si:dkey-30f3.2	100	72.846	ENSDARG00000090160	zgc:173709	100	66.408
ENSDARG00000098087	si:dkey-30f3.2	99	70.079	ENSDARG00000076272	znf1041	99	70.079
ENSDARG00000098087	si:dkey-30f3.2	99	43.590	ENSDARG00000089598	si:cabz01054396.2	100	51.087
ENSDARG00000098087	si:dkey-30f3.2	99	70.031	ENSDARG00000113808	si:dkeyp-82b4.6	97	70.031
ENSDARG00000098087	si:dkey-30f3.2	99	56.693	ENSDARG00000098901	CABZ01002768.1	100	56.615
ENSDARG00000098087	si:dkey-30f3.2	99	68.715	ENSDARG00000096189	si:dkey-54j5.2	99	70.391
ENSDARG00000098087	si:dkey-30f3.2	99	44.932	ENSDARG00000086223	si:ch73-144d13.4	100	45.833
ENSDARG00000098087	si:dkey-30f3.2	99	61.162	ENSDARG00000091477	znf1066	100	63.200
ENSDARG00000098087	si:dkey-30f3.2	99	64.088	ENSDARG00000099736	CABZ01075078.1	99	62.707
ENSDARG00000098087	si:dkey-30f3.2	99	47.095	ENSDARG00000096828	si:ch73-144d13.7	98	47.095
ENSDARG00000098087	si:dkey-30f3.2	100	72.846	ENSDARG00000094558	si:dkeyp-53e4.1	100	64.599
ENSDARG00000098087	si:dkey-30f3.2	99	50.737	ENSDARG00000074365	zgc:171901	100	58.750
ENSDARG00000098087	si:dkey-30f3.2	99	54.938	ENSDARG00000097812	si:ch73-144d13.5	99	54.938
ENSDARG00000098087	si:dkey-30f3.2	99	66.201	ENSDARG00000114437	zgc:173705	99	65.642
ENSDARG00000098087	si:dkey-30f3.2	100	64.463	ENSDARG00000101327	znf1076	100	63.085
ENSDARG00000098087	si:dkey-30f3.2	99	70.031	ENSDARG00000103721	si:dkey-122c11.7	100	70.031
ENSDARG00000098087	si:dkey-30f3.2	100	71.373	ENSDARG00000092938	znf1047	100	71.373
ENSDARG00000098087	si:dkey-30f3.2	99	50.943	ENSDARG00000102800	CABZ01081752.2	99	50.943
ENSDARG00000098087	si:dkey-30f3.2	100	62.245	ENSDARG00000100961	zgc:174653	93	65.882
ENSDARG00000098087	si:dkey-30f3.2	100	71.765	ENSDARG00000089814	znf1042	100	71.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098087	si:dkey-30f3.2	92	39.568	ENSCSEG00000011817	-	55	39.568	Cynoglossus_semilaevis
ENSDARG00000098087	si:dkey-30f3.2	76	56.044	ENSGMOG00000020024	-	100	56.044	Gadus_morhua
ENSDARG00000098087	si:dkey-30f3.2	99	36.216	ENSORLG00000012434	znf1064	77	36.216	Oryzias_latipes
ENSDARG00000098087	si:dkey-30f3.2	96	38.235	ENSORLG00015013828	-	67	38.235	Oryzias_latipes_hsok
ENSDARG00000098087	si:dkey-30f3.2	79	48.684	ENSPFOG00000005998	-	50	50.000	Poecilia_formosa
ENSDARG00000098087	si:dkey-30f3.2	79	43.333	ENSSMAG00000002598	-	50	43.333	Scophthalmus_maximus
ENSDARG00000098087	si:dkey-30f3.2	72	48.235	ENSTRUG00000022969	-	65	48.235	Takifugu_rubripes
ENSDARG00000098087	si:dkey-30f3.2	70	46.914	ENSXCOG00000015435	-	81	46.914	Xiphophorus_couchianus