EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098211 (Gene tree)
Gene ID: 569495
Gene Symbol: wrn
Alias: -
Full Name: Werner syndrome
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 72116 bases
Position: chr10:7483545-7555660
Accession: ZDB-GENE-070702-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139077	HRDC	PF00570.23	9.9e-10	1	1
ENSDARP00000133164	HRDC	PF00570.23	1e-09	1	1
ENSDARP00000146097	HRDC	PF00570.23	1e-09	1	1
ENSDARP00000139077	DEAD	PF00270.29	1.8e-15	1	1
ENSDARP00000133164	DEAD	PF00270.29	5.3e-15	1	1
ENSDARP00000146097	DEAD	PF00270.29	5.3e-15	1	1
ENSDARP00000139077	DNA_pol_A_exo1	PF01612.20	3.7e-31	1	1
ENSDARP00000133164	DNA_pol_A_exo1	PF01612.20	4.7e-31	1	1
ENSDARP00000146097	DNA_pol_A_exo1	PF01612.20	4.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163689	-	4714	-	ENSDARP00000133164	1436 (aa)	-	A0A0R4IHR6
ENSDART00000186945	-	4311	-	ENSDARP00000146097	1436 (aa)	-	A0A0R4IHR6
ENSDART00000162191	-	4164	XM_021479248	ENSDARP00000139077	1387 (aa)	XP_021334923	A0A0R4IT14

Gene Model

Click here to download ENSDARG00000098211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098211	wrn	89	46.951	ENSG00000165392	WRN	94	47.237	Homo_sapiens
ENSDARG00000098211	wrn	62	53.961	ENSAMEG00000000475	-	69	54.460	Ailuropoda_melanoleuca
ENSDARG00000098211	wrn	98	48.047	ENSAPLG00000001616	WRN	100	47.838	Anas_platyrhynchos
ENSDARG00000098211	wrn	89	45.626	ENSACAG00000003109	WRN	99	45.551	Anolis_carolinensis
ENSDARG00000098211	wrn	87	48.196	ENSANAG00000032806	WRN	96	48.273	Aotus_nancymaae
ENSDARG00000098211	wrn	99	62.517	ENSAMXG00000010066	wrn	99	62.552	Astyanax_mexicanus
ENSDARG00000098211	wrn	90	48.722	ENSBTAG00000021592	WRN	94	49.246	Bos_taurus
ENSDARG00000098211	wrn	59	33.253	WBGene00006944	wrn-1	73	33.253	Caenorhabditis_elegans
ENSDARG00000098211	wrn	89	47.489	ENSCJAG00000012511	WRN	93	47.517	Callithrix_jacchus
ENSDARG00000098211	wrn	99	47.995	ENSCAFG00000006410	WRN	99	49.324	Canis_familiaris
ENSDARG00000098211	wrn	90	49.925	ENSCAFG00020001236	WRN	94	49.850	Canis_lupus_dingo
ENSDARG00000098211	wrn	90	48.610	ENSCHIG00000014991	WRN	94	48.610	Capra_hircus
ENSDARG00000098211	wrn	90	48.129	ENSTSYG00000012689	WRN	94	48.757	Carlito_syrichta
ENSDARG00000098211	wrn	71	57.647	ENSCAPG00000016803	WRN	85	57.647	Cavia_aperea
ENSDARG00000098211	wrn	99	45.293	ENSCPOG00000002943	WRN	98	45.293	Cavia_porcellus
ENSDARG00000098211	wrn	89	47.154	ENSCCAG00000023793	WRN	94	47.732	Cebus_capucinus
ENSDARG00000098211	wrn	89	48.234	ENSCATG00000040557	WRN	96	48.571	Cercocebus_atys
ENSDARG00000098211	wrn	98	45.693	ENSCLAG00000000817	WRN	99	45.988	Chinchilla_lanigera
ENSDARG00000098211	wrn	89	47.202	ENSCSAG00000015810	WRN	96	47.489	Chlorocebus_sabaeus
ENSDARG00000098211	wrn	53	70.370	ENSCHOG00000008966	WRN	56	70.370	Choloepus_hoffmanni
ENSDARG00000098211	wrn	99	47.997	ENSCPBG00000013421	WRN	99	48.262	Chrysemys_picta_bellii
ENSDARG00000098211	wrn	59	41.067	ENSCING00000002232	-	68	41.777	Ciona_intestinalis
ENSDARG00000098211	wrn	89	47.450	ENSCANG00000037137	WRN	94	47.450	Colobus_angolensis_palliatus
ENSDARG00000098211	wrn	90	46.677	ENSCGRG00001016491	Wrn	94	46.677	Cricetulus_griseus_chok1gshd
ENSDARG00000098211	wrn	66	48.734	ENSCGRG00000016821	Wrn	81	48.786	Cricetulus_griseus_crigri
ENSDARG00000098211	wrn	95	45.267	ENSDNOG00000008481	WRN	99	45.267	Dasypus_novemcinctus
ENSDARG00000098211	wrn	90	47.612	ENSDORG00000002696	Wrn	99	45.253	Dipodomys_ordii
ENSDARG00000098211	wrn	59	64.615	ENSETEG00000019854	WRN	57	64.615	Echinops_telfairi
ENSDARG00000098211	wrn	90	47.170	ENSEASG00005016813	WRN	94	62.162	Equus_asinus_asinus
ENSDARG00000098211	wrn	99	46.242	ENSECAG00000000110	WRN	99	46.378	Equus_caballus
ENSDARG00000098211	wrn	64	67.568	ENSEEUG00000004926	WRN	69	67.568	Erinaceus_europaeus
ENSDARG00000098211	wrn	100	54.442	ENSELUG00000017817	wrn	93	70.335	Esox_lucius
ENSDARG00000098211	wrn	90	46.746	ENSFCAG00000024759	WRN	94	46.376	Felis_catus
ENSDARG00000098211	wrn	99	46.505	ENSFDAG00000008637	WRN	99	46.335	Fukomys_damarensis
ENSDARG00000098211	wrn	96	52.982	ENSGALG00000040909	WRN	92	52.982	Gallus_gallus
ENSDARG00000098211	wrn	99	50.938	ENSGAGG00000022647	WRN	99	47.838	Gopherus_agassizii
ENSDARG00000098211	wrn	89	48.006	ENSGGOG00000022154	WRN	89	52.738	Gorilla_gorilla
ENSDARG00000098211	wrn	99	46.075	ENSHGLG00000003638	WRN	99	45.927	Heterocephalus_glaber_female
ENSDARG00000098211	wrn	99	63.040	ENSIPUG00000002090	wrn	99	63.040	Ictalurus_punctatus
ENSDARG00000098211	wrn	99	46.553	ENSSTOG00000013599	WRN	99	46.280	Ictidomys_tridecemlineatus
ENSDARG00000098211	wrn	90	47.826	ENSJJAG00000015655	Wrn	94	47.483	Jaculus_jaculus
ENSDARG00000098211	wrn	99	46.730	ENSLACG00000001569	-	99	46.460	Latimeria_chalumnae
ENSDARG00000098211	wrn	97	55.209	ENSLOCG00000010792	wrn	100	55.180	Lepisosteus_oculatus
ENSDARG00000098211	wrn	90	48.911	ENSLAFG00000004434	WRN	94	48.986	Loxodonta_africana
ENSDARG00000098211	wrn	90	48.464	ENSMFAG00000043428	WRN	94	48.872	Macaca_fascicularis
ENSDARG00000098211	wrn	90	46.955	ENSMMUG00000022655	WRN	94	47.159	Macaca_mulatta
ENSDARG00000098211	wrn	90	47.102	ENSMNEG00000032617	WRN	94	47.306	Macaca_nemestrina
ENSDARG00000098211	wrn	89	48.159	ENSMLEG00000038296	WRN	94	48.496	Mandrillus_leucophaeus
ENSDARG00000098211	wrn	96	52.281	ENSMGAG00000004960	WRN	92	52.281	Meleagris_gallopavo
ENSDARG00000098211	wrn	90	46.953	ENSMAUG00000016235	Wrn	94	46.797	Mesocricetus_auratus
ENSDARG00000098211	wrn	90	46.866	ENSMICG00000010630	WRN	99	44.189	Microcebus_murinus
ENSDARG00000098211	wrn	89	47.813	ENSMOCG00000013972	Wrn	94	47.404	Microtus_ochrogaster
ENSDARG00000098211	wrn	91	47.573	ENSMODG00000018997	WRN	95	47.754	Monodelphis_domestica
ENSDARG00000098211	wrn	99	44.844	MGP_CAROLIEiJ_G0030961	Wrn	99	44.844	Mus_caroli
ENSDARG00000098211	wrn	90	47.270	ENSMUSG00000031583	Wrn	94	47.270	Mus_musculus
ENSDARG00000098211	wrn	90	47.494	MGP_PahariEiJ_G0021430	Wrn	94	47.376	Mus_pahari
ENSDARG00000098211	wrn	90	47.160	MGP_SPRETEiJ_G0032079	Wrn	94	47.160	Mus_spretus
ENSDARG00000098211	wrn	90	49.061	ENSMPUG00000010201	WRN	94	48.835	Mustela_putorius_furo
ENSDARG00000098211	wrn	90	49.698	ENSMLUG00000005863	WRN	99	47.127	Myotis_lucifugus
ENSDARG00000098211	wrn	89	47.590	ENSNGAG00000018413	Wrn	93	47.590	Nannospalax_galili
ENSDARG00000098211	wrn	89	47.862	ENSNLEG00000012006	WRN	94	47.124	Nomascus_leucogenys
ENSDARG00000098211	wrn	51	57.635	ENSMEUG00000008271	-	53	57.635	Notamacropus_eugenii
ENSDARG00000098211	wrn	83	43.506	ENSOPRG00000001480	WRN	87	43.586	Ochotona_princeps
ENSDARG00000098211	wrn	90	48.198	ENSODEG00000004076	WRN	94	48.048	Octodon_degus
ENSDARG00000098211	wrn	91	47.800	ENSOANG00000005952	-	98	47.576	Ornithorhynchus_anatinus
ENSDARG00000098211	wrn	90	49.363	ENSOCUG00000012620	WRN	85	49.588	Oryctolagus_cuniculus
ENSDARG00000098211	wrn	90	48.065	ENSOGAG00000009600	WRN	97	48.214	Otolemur_garnettii
ENSDARG00000098211	wrn	90	48.343	ENSOARG00000000163	WRN	94	48.645	Ovis_aries
ENSDARG00000098211	wrn	89	47.541	ENSPPAG00000036871	WRN	93	47.973	Pan_paniscus
ENSDARG00000098211	wrn	99	46.758	ENSPPRG00000010928	WRN	99	46.138	Panthera_pardus
ENSDARG00000098211	wrn	90	49.204	ENSPTIG00000020609	WRN	93	48.632	Panthera_tigris_altaica
ENSDARG00000098211	wrn	89	47.407	ENSPTRG00000020145	WRN	94	47.059	Pan_troglodytes
ENSDARG00000098211	wrn	89	47.206	ENSPANG00000018594	WRN	94	47.124	Papio_anubis
ENSDARG00000098211	wrn	79	73.980	ENSPKIG00000025497	wrn	96	73.980	Paramormyrops_kingsleyae
ENSDARG00000098211	wrn	99	47.397	ENSPSIG00000013411	WRN	99	47.463	Pelodiscus_sinensis
ENSDARG00000098211	wrn	99	43.609	ENSPEMG00000020615	Wrn	99	43.336	Peromyscus_maniculatus_bairdii
ENSDARG00000098211	wrn	90	48.355	ENSPCIG00000020146	WRN	96	48.928	Phascolarctos_cinereus
ENSDARG00000098211	wrn	89	47.245	ENSPPYG00000018494	WRN	94	47.163	Pongo_abelii
ENSDARG00000098211	wrn	80	56.000	ENSPCAG00000013763	WRN	81	56.000	Procavia_capensis
ENSDARG00000098211	wrn	69	51.799	ENSPCOG00000012938	WRN	97	51.799	Propithecus_coquereli
ENSDARG00000098211	wrn	85	45.729	ENSPVAG00000012909	WRN	92	45.729	Pteropus_vampyrus
ENSDARG00000098211	wrn	99	63.617	ENSPNAG00000021848	wrn	99	63.410	Pygocentrus_nattereri
ENSDARG00000098211	wrn	90	47.754	ENSRNOG00000015440	Wrn	94	47.416	Rattus_norvegicus
ENSDARG00000098211	wrn	89	48.157	ENSRBIG00000031825	WRN	96	47.951	Rhinopithecus_bieti
ENSDARG00000098211	wrn	89	47.349	ENSRROG00000045381	WRN	94	47.865	Rhinopithecus_roxellana
ENSDARG00000098211	wrn	89	47.810	ENSSBOG00000027238	WRN	94	47.810	Saimiri_boliviensis_boliviensis
ENSDARG00000098211	wrn	90	50.000	ENSSHAG00000005577	WRN	95	49.702	Sarcophilus_harrisii
ENSDARG00000098211	wrn	99	55.490	ENSSFOG00015006123	wrn	98	57.346	Scleropages_formosus
ENSDARG00000098211	wrn	98	47.159	ENSSSCG00000015840	WRN	97	49.511	Sus_scrofa
ENSDARG00000098211	wrn	68	52.039	ENSTGUG00000001765	WRN	100	51.650	Taeniopygia_guttata
ENSDARG00000098211	wrn	53	86.667	ENSTBEG00000012702	-	53	86.667	Tupaia_belangeri
ENSDARG00000098211	wrn	80	52.000	ENSTTRG00000012302	WRN	90	45.645	Tursiops_truncatus
ENSDARG00000098211	wrn	90	47.676	ENSUAMG00000021324	WRN	94	48.151	Ursus_americanus
ENSDARG00000098211	wrn	81	49.371	ENSUMAG00000007159	WRN	96	50.042	Ursus_maritimus
ENSDARG00000098211	wrn	81	51.038	ENSVPAG00000011004	WRN	88	50.182	Vicugna_pacos
ENSDARG00000098211	wrn	99	47.927	ENSVVUG00000019867	WRN	99	47.927	Vulpes_vulpes
ENSDARG00000098211	wrn	90	50.299	ENSXETG00000018302	wrn	99	51.525	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	21873635.	IBA	Function
GO:0000400	four-way junction DNA binding	21873635.	IBA	Function
GO:0000403	Y-form DNA binding	21873635.	IBA	Function
GO:0000405	bubble DNA binding	21873635.	IBA	Function
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000731	DNA synthesis involved in DNA repair	21873635.	IBA	Process
GO:0000781	chromosome, telomeric region	21873635.	IBA	Component
GO:0001302	replicative cell aging	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0003824	catalytic activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005657	replication fork	21873635.	IBA	Component
GO:0005662	DNA replication factor A complex	21873635.	IBA	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005813	centrosome	21873635.	IBA	Component
GO:0006139	nucleobase-containing compound metabolic process	-	IEA	Process
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006284	base-excision repair	21873635.	IBA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0006979	response to oxidative stress	21873635.	IBA	Process
GO:0007569	cell aging	21873635.	IBA	Process
GO:0008026	ATP-dependent helicase activity	-	IEA	Function
GO:0008340	determination of adult lifespan	21873635.	IBA	Process
GO:0008408	3'-5' exonuclease activity	21873635.	IBA	Function
GO:0008408	3'-5' exonuclease activity	-	IEA	Function
GO:0009267	cellular response to starvation	21873635.	IBA	Process
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0010225	response to UV-C	21873635.	IBA	Process
GO:0010259	multicellular organism aging	21873635.	IBA	Process
GO:0030145	manganese ion binding	21873635.	IBA	Function
GO:0031297	replication fork processing	21873635.	IBA	Process
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0035861	site of double-strand break	21873635.	IBA	Component
GO:0042803	protein homodimerization activity	21873635.	IBA	Function
GO:0042981	regulation of apoptotic process	21873635.	IBA	Process
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	-	IEA	Function
GO:0044237	cellular metabolic process	-	IEA	Process
GO:0044806	G-quadruplex DNA unwinding	21873635.	IBA	Process
GO:0044877	protein-containing complex binding	21873635.	IBA	Function
GO:0051345	positive regulation of hydrolase activity	21873635.	IBA	Process
GO:0061749	forked DNA-dependent helicase activity	21873635.	IBA	Function
GO:0061820	telomeric D-loop disassembly	21873635.	IBA	Process
GO:0061821	telomeric D-loop binding	21873635.	IBA	Function
GO:0070337	3'-flap-structured DNA binding	21873635.	IBA	Function
GO:0071480	cellular response to gamma radiation	21873635.	IBA	Process
GO:0098530	positive regulation of strand invasion	21873635.	IBA	Process
GO:1905773	8-hydroxy-2'-deoxyguanosine DNA binding	21873635.	IBA	Function