EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000098228 (Gene tree)
Gene ID: 407984
Gene Symbol: thrap3b
Alias: zgc:85716
Full Name: thyroid hormone receptor associated protein 3b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 21782 bases
Position: chr19:3865210-3886991
Accession: ZDB-GENE-040516-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000141866	THRAP3_BCLAF1	PF15440.6	1.2e-100	1	2
ENSDARP00000141866	THRAP3_BCLAF1	PF15440.6	1.2e-100	2	2
ENSDARP00000139324	THRAP3_BCLAF1	PF15440.6	1e-97	1	2
ENSDARP00000139324	THRAP3_BCLAF1	PF15440.6	1e-97	2	2
ENSDARP00000137518	THRAP3_BCLAF1	PF15440.6	3.1e-75	1	1
ENSDARP00000139835	THRAP3_BCLAF1	PF15440.6	8.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163711	-	760	-	ENSDARP00000133980	216 (aa)	-	A0A0R4IJE9
ENSDART00000157952	-	732	-	-	- (aa)	-	-
ENSDART00000168377	-	3917	XM_005173742	ENSDARP00000141866	880 (aa)	XP_005173799	A0A0R4IWW7
ENSDART00000163954	-	592	-	ENSDARP00000134323	129 (aa)	-	A0A0R4IFE0
ENSDART00000172735	-	918	-	ENSDARP00000137518	306 (aa)	-	A0A0J9YJF4
ENSDART00000172271	-	2276	-	ENSDARP00000139324	665 (aa)	-	A0A0R4IXH8
ENSDART00000162085	-	682	-	ENSDARP00000134682	180 (aa)	-	A0A0R4IKU8
ENSDART00000161830	-	821	-	ENSDARP00000139835	238 (aa)	-	A0A0R4IS06

Gene Model

Click here to download ENSDARG00000098228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098228	thrap3b	77	40.164	ENSG00000029363	BCLAF1	52	58.586	Homo_sapiens
ENSDARG00000098228	thrap3b	99	52.011	ENSAPOG00000001848	thrap3b	91	53.730	Acanthochromis_polyacanthus
ENSDARG00000098228	thrap3b	99	52.548	ENSACIG00000015331	thrap3b	91	53.092	Amphilophus_citrinellus
ENSDARG00000098228	thrap3b	99	51.724	ENSAOCG00000015572	thrap3b	91	53.318	Amphiprion_ocellaris
ENSDARG00000098228	thrap3b	99	51.437	ENSAPEG00000021862	thrap3b	93	52.346	Amphiprion_percula
ENSDARG00000098228	thrap3b	99	51.594	ENSATEG00000006350	thrap3b	94	51.941	Anabas_testudineus
ENSDARG00000098228	thrap3b	99	49.845	ENSACLG00000004763	thrap3b	91	51.950	Astatotilapia_calliptera
ENSDARG00000098228	thrap3b	99	64.897	ENSAMXG00000020877	thrap3b	100	67.182	Astyanax_mexicanus
ENSDARG00000098228	thrap3b	94	34.115	ENSAMXG00000001863	thrap3a	92	35.210	Astyanax_mexicanus
ENSDARG00000098228	thrap3b	78	38.824	ENSCATG00000035101	-	60	40.390	Cercocebus_atys
ENSDARG00000098228	thrap3b	77	53.659	ENSCPBG00000018530	THRAP3	93	57.000	Chrysemys_picta_bellii
ENSDARG00000098228	thrap3b	93	50.462	ENSCSEG00000010392	thrap3b	93	49.712	Cynoglossus_semilaevis
ENSDARG00000098228	thrap3b	98	51.014	ENSCVAG00000001547	thrap3b	91	52.907	Cyprinodon_variegatus
ENSDARG00000098228	thrap3b	99	39.946	ENSCVAG00000017634	thrap3a	59	63.483	Cyprinodon_variegatus
ENSDARG00000098228	thrap3b	99	49.014	ENSELUG00000007499	thrap3b	94	48.735	Esox_lucius
ENSDARG00000098228	thrap3b	99	42.347	ENSELUG00000017733	thrap3a	95	40.021	Esox_lucius
ENSDARG00000098228	thrap3b	98	49.709	ENSFHEG00000001051	thrap3b	91	50.693	Fundulus_heteroclitus
ENSDARG00000098228	thrap3b	99	49.711	ENSGAFG00000007090	thrap3b	89	50.674	Gambusia_affinis
ENSDARG00000098228	thrap3b	94	44.105	ENSGACG00000002319	thrap3b	91	43.371	Gasterosteus_aculeatus
ENSDARG00000098228	thrap3b	82	53.659	ENSGAGG00000024863	THRAP3	93	57.000	Gopherus_agassizii
ENSDARG00000098228	thrap3b	99	50.000	ENSHBUG00000001708	thrap3b	90	51.217	Haplochromis_burtoni
ENSDARG00000098228	thrap3b	98	46.243	ENSHCOG00000004098	thrap3b	90	48.592	Hippocampus_comes
ENSDARG00000098228	thrap3b	99	33.511	ENSIPUG00000015339	thrap3a	88	36.634	Ictalurus_punctatus
ENSDARG00000098228	thrap3b	99	62.130	ENSIPUG00000005707	thrap3b	95	63.626	Ictalurus_punctatus
ENSDARG00000098228	thrap3b	99	51.003	ENSKMAG00000012105	thrap3b	91	53.009	Kryptolebias_marmoratus
ENSDARG00000098228	thrap3b	98	41.240	ENSKMAG00000005707	thrap3a	98	33.798	Kryptolebias_marmoratus
ENSDARG00000098228	thrap3b	98	50.146	ENSLBEG00000017803	thrap3b	91	53.061	Labrus_bergylta
ENSDARG00000098228	thrap3b	96	33.148	ENSMNEG00000042630	-	63	42.340	Macaca_nemestrina
ENSDARG00000098228	thrap3b	94	37.433	ENSMAMG00000007707	thrap3a	92	36.920	Mastacembelus_armatus
ENSDARG00000098228	thrap3b	99	54.114	ENSMAMG00000004348	thrap3b	90	47.148	Mastacembelus_armatus
ENSDARG00000098228	thrap3b	99	49.128	ENSMZEG00005026309	thrap3b	91	52.009	Maylandia_zebra
ENSDARG00000098228	thrap3b	99	47.399	ENSMMOG00000013594	thrap3b	90	48.077	Mola_mola
ENSDARG00000098228	thrap3b	91	35.294	ENSMMOG00000018587	thrap3a	78	35.535	Mola_mola
ENSDARG00000098228	thrap3b	99	55.205	ENSMALG00000012582	thrap3b	93	52.745	Monopterus_albus
ENSDARG00000098228	thrap3b	78	42.593	ENSMUSG00000043962	Thrap3	99	34.397	Mus_musculus
ENSDARG00000098228	thrap3b	68	38.897	MGP_PahariEiJ_G0028802	-	61	69.880	Mus_pahari
ENSDARG00000098228	thrap3b	68	36.295	MGP_SPRETEiJ_G0027450	Thrap3	61	69.880	Mus_spretus
ENSDARG00000098228	thrap3b	99	51.111	ENSNBRG00000014237	thrap3b	95	51.261	Neolamprologus_brichardi
ENSDARG00000098228	thrap3b	94	35.714	ENSNBRG00000009991	thrap3a	94	38.674	Neolamprologus_brichardi
ENSDARG00000098228	thrap3b	99	50.464	ENSONIG00000013673	thrap3b	97	49.738	Oreochromis_niloticus
ENSDARG00000098228	thrap3b	99	46.398	ENSORLG00000009543	thrap3b	91	50.581	Oryzias_latipes
ENSDARG00000098228	thrap3b	99	45.963	ENSORLG00020016319	thrap3b	91	51.566	Oryzias_latipes_hni
ENSDARG00000098228	thrap3b	99	46.398	ENSORLG00015007831	thrap3b	91	50.408	Oryzias_latipes_hsok
ENSDARG00000098228	thrap3b	99	45.058	ENSOMEG00000005716	thrap3b	91	50.528	Oryzias_melastigma
ENSDARG00000098228	thrap3b	97	55.598	ENSPKIG00000005150	thrap3a	97	45.955	Paramormyrops_kingsleyae
ENSDARG00000098228	thrap3b	74	53.659	ENSPSIG00000010296	THRAP3	82	57.000	Pelodiscus_sinensis
ENSDARG00000098228	thrap3b	92	36.402	ENSPMGG00000023429	thrap3b	73	48.410	Periophthalmus_magnuspinnatus
ENSDARG00000098228	thrap3b	99	49.280	ENSPFOG00000000525	thrap3b	91	49.883	Poecilia_formosa
ENSDARG00000098228	thrap3b	99	49.568	ENSPLAG00000016521	thrap3b	91	50.000	Poecilia_latipinna
ENSDARG00000098228	thrap3b	99	50.294	ENSPMEG00000009021	thrap3b	91	50.411	Poecilia_mexicana
ENSDARG00000098228	thrap3b	99	51.534	ENSPREG00000009927	thrap3b	91	49.537	Poecilia_reticulata
ENSDARG00000098228	thrap3b	74	43.220	ENSPPYG00000001544	-	66	49.875	Pongo_abelii
ENSDARG00000098228	thrap3b	76	45.059	ENSPCAG00000008951	THRAP3	50	49.123	Procavia_capensis
ENSDARG00000098228	thrap3b	99	51.111	ENSPNYG00000003062	thrap3b	90	49.050	Pundamilia_nyererei
ENSDARG00000098228	thrap3b	94	68.735	ENSPNAG00000028762	thrap3b	98	68.458	Pygocentrus_nattereri
ENSDARG00000098228	thrap3b	99	36.772	ENSPNAG00000015136	thrap3a	72	35.327	Pygocentrus_nattereri
ENSDARG00000098228	thrap3b	99	46.316	ENSSFOG00015020057	thrap3	91	48.957	Scleropages_formosus
ENSDARG00000098228	thrap3b	99	50.862	ENSSMAG00000001259	thrap3b	90	51.157	Scophthalmus_maximus
ENSDARG00000098228	thrap3b	99	52.035	ENSSDUG00000007054	thrap3b	90	53.783	Seriola_dumerili
ENSDARG00000098228	thrap3b	98	42.547	ENSSDUG00000010132	thrap3a	91	55.556	Seriola_dumerili
ENSDARG00000098228	thrap3b	98	42.818	ENSSLDG00000003306	thrap3a	91	55.556	Seriola_lalandi_dorsalis
ENSDARG00000098228	thrap3b	99	51.744	ENSSLDG00000009210	thrap3b	91	53.596	Seriola_lalandi_dorsalis
ENSDARG00000098228	thrap3b	98	41.144	ENSSPAG00000017651	thrap3a	88	50.852	Stegastes_partitus
ENSDARG00000098228	thrap3b	85	53.571	ENSSPAG00000009248	thrap3b	95	56.261	Stegastes_partitus
ENSDARG00000098228	thrap3b	93	35.761	ENSTRUG00000010702	thrap3a	74	35.833	Takifugu_rubripes
ENSDARG00000098228	thrap3b	97	42.136	ENSTRUG00000010336	thrap3b	72	48.044	Takifugu_rubripes
ENSDARG00000098228	thrap3b	93	44.304	ENSTNIG00000004582	thrap3b	94	42.020	Tetraodon_nigroviridis
ENSDARG00000098228	thrap3b	88	38.863	ENSXCOG00000001569	thrap3a	83	45.404	Xiphophorus_couchianus
ENSDARG00000098228	thrap3b	99	51.852	ENSXCOG00000018772	thrap3b	91	48.608	Xiphophorus_couchianus
ENSDARG00000098228	thrap3b	99	50.000	ENSXMAG00000017962	thrap3b	91	49.762	Xiphophorus_maculatus