EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000098280 (Gene tree)
Gene ID
324302
Gene Symbol
rbm5
Alias
wu:fc25a08|wu:fe06f12
Full Name
RNA binding motif protein 5
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
18742 bases
Position
chr6:53263854-53282595
Accession
ZDB-GENE-030131-3022
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000139300zf-RanBPPF00641.181.6e-1011
ENSDARP00000136127zf-RanBPPF00641.184.4e-1011
ENSDARP00000139300RRM_1PF00076.225e-1111
ENSDARP00000136127RRM_1PF00076.224.3e-1011
ENSDARP00000136127G-patchPF01585.234.5e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000167843-524-ENSDARP0000013541470 (aa)-X1WER7
ENSDART00000157621-2499-ENSDARP00000136127832 (aa)-A0A0G2KUM0
ENSDART00000172615-1319-ENSDARP00000137187184 (aa)-A6H8S5
ENSDART00000165036-1084-ENSDARP00000139300302 (aa)-A0A0G2L3H6
ENSDART00000170084-2323--- (aa)--
Gene Model
Click here to download ENSDARG00000098280's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098280's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000098280rbm58041.994ENSDARG00000077400rbm108246.119
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000098280rbm510063.245ENSG00000003756RBM510059.016Homo_sapiens
ENSDARG00000098280rbm510062.376ENSAPOG00000006011-10056.847Acanthochromis_polyacanthus
ENSDARG00000098280rbm510069.508ENSAPOG00000016625rbm510063.448Acanthochromis_polyacanthus
ENSDARG00000098280rbm510063.245ENSAMEG00000012005RBM510057.562Ailuropoda_melanoleuca
ENSDARG00000098280rbm59859.532ENSACIG00000021310-9955.269Amphilophus_citrinellus
ENSDARG00000098280rbm56868.615ENSACIG00000007571rbm510068.943Amphilophus_citrinellus
ENSDARG00000098280rbm510069.508ENSAOCG00000002880rbm510063.688Amphiprion_ocellaris
ENSDARG00000098280rbm59861.074ENSAOCG00000017312-9956.279Amphiprion_ocellaris
ENSDARG00000098280rbm58863.307ENSAPEG00000011862rbm59262.725Amphiprion_percula
ENSDARG00000098280rbm510062.706ENSAPEG00000018222RBM510056.586Amphiprion_percula
ENSDARG00000098280rbm510069.508ENSATEG00000024663rbm510063.018Anabas_testudineus
ENSDARG00000098280rbm510061.311ENSATEG00000003838-10056.883Anabas_testudineus
ENSDARG00000098280rbm59158.473ENSAPLG00000011176RBM59958.344Anas_platyrhynchos
ENSDARG00000098280rbm510062.583ENSACAG00000008580RBM510056.940Anolis_carolinensis
ENSDARG00000098280rbm510063.245ENSANAG00000025199RBM510057.796Aotus_nancymaae
ENSDARG00000098280rbm510069.935ENSACLG00000012748rbm510063.825Astatotilapia_calliptera
ENSDARG00000098280rbm58980.488ENSACLG00000024198RBM59880.952Astatotilapia_calliptera
ENSDARG00000098280rbm58369.817ENSAMXG00000008146rbm510070.099Astyanax_mexicanus
ENSDARG00000098280rbm510063.245ENSBTAG00000006330RBM510057.679Bos_taurus
ENSDARG00000098280rbm510063.245ENSCJAG00000004740RBM510057.796Callithrix_jacchus
ENSDARG00000098280rbm510063.245ENSCAFG00000010866RBM510057.679Canis_familiaris
ENSDARG00000098280rbm510063.245ENSCAFG00020022126RBM510057.679Canis_lupus_dingo
ENSDARG00000098280rbm510063.245ENSCHIG00000018435RBM510057.796Capra_hircus
ENSDARG00000098280rbm510062.252ENSTSYG00000004158RBM59853.631Carlito_syrichta
ENSDARG00000098280rbm510059.272ENSCAPG00000013495RBM59257.188Cavia_aperea
ENSDARG00000098280rbm510063.245ENSCPOG00000008151RBM510058.118Cavia_porcellus
ENSDARG00000098280rbm59962.458ENSCCAG00000026401RBM510057.027Cebus_capucinus
ENSDARG00000098280rbm510063.245ENSCATG00000041038RBM510057.796Cercocebus_atys
ENSDARG00000098280rbm510063.245ENSCLAG00000007873RBM510058.118Chinchilla_lanigera
ENSDARG00000098280rbm510063.245ENSCSAG00000014401RBM510057.796Chlorocebus_sabaeus
ENSDARG00000098280rbm56958.611ENSCHOG00000009429RBM57355.738Choloepus_hoffmanni
ENSDARG00000098280rbm59057.199ENSCPBG00000002406RBM510056.639Chrysemys_picta_bellii
ENSDARG00000098280rbm510060.265ENSCANG00000031250RBM510056.624Colobus_angolensis_palliatus
ENSDARG00000098280rbm510063.245ENSCGRG00001010543Rbm510056.128Cricetulus_griseus_chok1gshd
ENSDARG00000098280rbm510063.245ENSCGRG00000008475Rbm510056.128Cricetulus_griseus_crigri
ENSDARG00000098280rbm510067.869ENSCSEG00000000596rbm59760.644Cynoglossus_semilaevis
ENSDARG00000098280rbm510068.852ENSCVAG00000005655rbm510063.073Cyprinodon_variegatus
ENSDARG00000098280rbm510063.245ENSDNOG00000011756RBM510057.913Dasypus_novemcinctus
ENSDARG00000098280rbm510063.245ENSDORG00000007692Rbm510057.679Dipodomys_ordii
ENSDARG00000098280rbm59053.367ENSETEG00000012773RBM59355.097Echinops_telfairi
ENSDARG00000098280rbm57164.011ENSEBUG00000017034rbm58743.636Eptatretus_burgeri
ENSDARG00000098280rbm510063.245ENSEASG00005011835RBM510057.679Equus_asinus_asinus
ENSDARG00000098280rbm510063.245ENSECAG00000020447RBM510057.679Equus_caballus
ENSDARG00000098280rbm56872.906ENSEEUG00000005943RBM58872.906Erinaceus_europaeus
ENSDARG00000098280rbm510072.876ENSELUG00000022467rbm510062.314Esox_lucius
ENSDARG00000098280rbm510063.245ENSFCAG00000014639RBM510057.679Felis_catus
ENSDARG00000098280rbm59562.369ENSFALG00000008828RBM58358.473Ficedula_albicollis
ENSDARG00000098280rbm510063.245ENSFDAG00000001897RBM510058.156Fukomys_damarensis
ENSDARG00000098280rbm59285.714ENSFHEG00000015954rbm59885.714Fundulus_heteroclitus
ENSDARG00000098280rbm59867.105ENSGMOG00000016224rbm510060.710Gadus_morhua
ENSDARG00000098280rbm58253.200ENSGMOG00000007810-7062.763Gadus_morhua
ENSDARG00000098280rbm59562.718ENSGALG00000039288RBM58358.215Gallus_gallus
ENSDARG00000098280rbm510068.852ENSGAFG00000010690rbm510061.872Gambusia_affinis
ENSDARG00000098280rbm510060.577ENSGACG00000000858-9364.706Gasterosteus_aculeatus
ENSDARG00000098280rbm510069.836ENSGACG00000010469rbm510063.754Gasterosteus_aculeatus
ENSDARG00000098280rbm58557.655ENSGAGG00000007935RBM59955.720Gopherus_agassizii
ENSDARG00000098280rbm510063.245ENSGGOG00000014490RBM510057.796Gorilla_gorilla
ENSDARG00000098280rbm58980.488ENSHBUG00000011901-9880.952Haplochromis_burtoni
ENSDARG00000098280rbm510069.608ENSHBUG00000001941rbm510063.387Haplochromis_burtoni
ENSDARG00000098280rbm510063.245ENSHGLG00000014844RBM510058.049Heterocephalus_glaber_female
ENSDARG00000098280rbm510063.245ENSHGLG00100010739RBM510058.118Heterocephalus_glaber_male
ENSDARG00000098280rbm510066.007ENSHCOG00000017110rbm59962.027Hippocampus_comes
ENSDARG00000098280rbm510058.170ENSHCOG00000004536-10050.055Hippocampus_comes
ENSDARG00000098280rbm510087.417ENSIPUG00000000640rbm510073.081Ictalurus_punctatus
ENSDARG00000098280rbm510063.245ENSSTOG00000013856RBM510057.679Ictidomys_tridecemlineatus
ENSDARG00000098280rbm510063.245ENSJJAG00000008844Rbm59957.932Jaculus_jaculus
ENSDARG00000098280rbm510071.803ENSKMAG00000006663rbm510063.552Kryptolebias_marmoratus
ENSDARG00000098280rbm56651.464ENSLBEG00000002522-9559.524Labrus_bergylta
ENSDARG00000098280rbm510067.869ENSLBEG00000020858rbm510062.069Labrus_bergylta
ENSDARG00000098280rbm510059.736ENSLBEG00000010877-8164.623Labrus_bergylta
ENSDARG00000098280rbm59962.829ENSLACG00000016572RBM510057.317Latimeria_chalumnae
ENSDARG00000098280rbm510071.338ENSLOCG00000010774rbm510060.337Lepisosteus_oculatus
ENSDARG00000098280rbm510063.245ENSLAFG00000006733RBM510057.683Loxodonta_africana
ENSDARG00000098280rbm510063.245ENSMFAG00000031609RBM510057.796Macaca_fascicularis
ENSDARG00000098280rbm59862.963ENSMMUG00000004921RBM59957.665Macaca_mulatta
ENSDARG00000098280rbm510063.245ENSMNEG00000044394RBM510057.913Macaca_nemestrina
ENSDARG00000098280rbm510063.245ENSMLEG00000034689RBM510057.294Mandrillus_leucophaeus
ENSDARG00000098280rbm510063.158ENSMAMG00000023948-10056.014Mastacembelus_armatus
ENSDARG00000098280rbm59183.333ENSMAMG00000017277rbm59783.333Mastacembelus_armatus
ENSDARG00000098280rbm510069.935ENSMZEG00005015328rbm510063.825Maylandia_zebra
ENSDARG00000098280rbm510058.224ENSMZEG00005010035-10053.681Maylandia_zebra
ENSDARG00000098280rbm59158.442ENSMGAG00000003972RBM510058.312Meleagris_gallopavo
ENSDARG00000098280rbm59862.963ENSMAUG00000020572Rbm59855.658Mesocricetus_auratus
ENSDARG00000098280rbm510062.914ENSMICG00000016179RBM510056.782Microcebus_murinus
ENSDARG00000098280rbm510060.927ENSMOCG00000017479Rbm510055.734Microtus_ochrogaster
ENSDARG00000098280rbm59947.871ENSMMOG00000021804-9948.989Mola_mola
ENSDARG00000098280rbm510057.143ENSMMOG00000015342rbm510057.368Mola_mola
ENSDARG00000098280rbm510063.245ENSMODG00000012301RBM510056.706Monodelphis_domestica
ENSDARG00000098280rbm59864.333ENSMALG00000000609rbm59959.527Monopterus_albus
ENSDARG00000098280rbm510058.882ENSMALG00000016769-10054.977Monopterus_albus
ENSDARG00000098280rbm510063.245MGP_CAROLIEiJ_G0032660Rbm59072.857Mus_caroli
ENSDARG00000098280rbm510063.245ENSMUSG00000032580Rbm59072.857Mus_musculus
ENSDARG00000098280rbm510063.245MGP_PahariEiJ_G0015528Rbm59072.857Mus_pahari
ENSDARG00000098280rbm510063.245MGP_SPRETEiJ_G0033805Rbm59470.548Mus_spretus
ENSDARG00000098280rbm510063.576ENSMLUG00000007875RBM510057.429Myotis_lucifugus
ENSDARG00000098280rbm510063.245ENSNGAG00000011777Rbm510057.208Nannospalax_galili
ENSDARG00000098280rbm59754.578ENSNBRG00000004400RBM59555.990Neolamprologus_brichardi
ENSDARG00000098280rbm510069.935ENSNBRG00000018097rbm510063.501Neolamprologus_brichardi
ENSDARG00000098280rbm510063.245ENSNLEG00000006943RBM510057.679Nomascus_leucogenys
ENSDARG00000098280rbm59151.681ENSMEUG00000012994RBM510052.251Notamacropus_eugenii
ENSDARG00000098280rbm59055.556ENSOPRG00000015154RBM59356.477Ochotona_princeps
ENSDARG00000098280rbm510063.245ENSODEG00000016254-10058.087Octodon_degus
ENSDARG00000098280rbm510059.603ENSODEG00000019111-10055.437Octodon_degus
ENSDARG00000098280rbm510059.539ENSONIG00000019007RBM510055.272Oreochromis_niloticus
ENSDARG00000098280rbm510069.935ENSONIG00000004107rbm510062.243Oreochromis_niloticus
ENSDARG00000098280rbm58656.117ENSOANG00000006557RBM510054.920Ornithorhynchus_anatinus
ENSDARG00000098280rbm510062.914ENSOCUG00000011652RBM510056.487Oryctolagus_cuniculus
ENSDARG00000098280rbm510055.629ENSORLG00000001053-10050.794Oryzias_latipes
ENSDARG00000098280rbm510067.869ENSORLG00000003369rbm59961.023Oryzias_latipes
ENSDARG00000098280rbm510067.541ENSORLG00020021744rbm510061.833Oryzias_latipes_hni
ENSDARG00000098280rbm510055.960ENSORLG00020006782-9849.341Oryzias_latipes_hni
ENSDARG00000098280rbm59183.333ENSORLG00015018379rbm58283.333Oryzias_latipes_hsok
ENSDARG00000098280rbm510055.629ENSORLG00015002854-9849.523Oryzias_latipes_hsok
ENSDARG00000098280rbm510068.197ENSOMEG00000002219rbm510061.970Oryzias_melastigma
ENSDARG00000098280rbm57160.248ENSOMEG00000010653-9757.927Oryzias_melastigma
ENSDARG00000098280rbm59156.234ENSOGAG00000004205RBM510056.234Otolemur_garnettii
ENSDARG00000098280rbm510063.245ENSOARG00000010923RBM510057.796Ovis_aries
ENSDARG00000098280rbm510063.245ENSPPAG00000043010RBM510057.796Pan_paniscus
ENSDARG00000098280rbm510063.245ENSPPRG00000005404RBM510057.679Panthera_pardus
ENSDARG00000098280rbm510063.245ENSPTIG00000000962RBM510057.679Panthera_tigris_altaica
ENSDARG00000098280rbm510063.245ENSPTRG00000014946RBM510057.796Pan_troglodytes
ENSDARG00000098280rbm510063.245ENSPANG00000018507RBM510057.796Papio_anubis
ENSDARG00000098280rbm57551.380ENSPKIG00000019187-10052.147Paramormyrops_kingsleyae
ENSDARG00000098280rbm55759.884ENSPKIG00000022215-8461.850Paramormyrops_kingsleyae
ENSDARG00000098280rbm510069.079ENSPKIG00000024837RBM510061.617Paramormyrops_kingsleyae
ENSDARG00000098280rbm58657.339ENSPSIG00000016073RBM510057.808Pelodiscus_sinensis
ENSDARG00000098280rbm57753.425ENSPMGG00000017347rbm510052.744Periophthalmus_magnuspinnatus
ENSDARG00000098280rbm58879.487ENSPMGG00000004719-9778.571Periophthalmus_magnuspinnatus
ENSDARG00000098280rbm58358.312ENSPMAG00000001998rbm56855.693Petromyzon_marinus
ENSDARG00000098280rbm510063.245ENSPCIG00000021531RBM510057.176Phascolarctos_cinereus
ENSDARG00000098280rbm510068.301ENSPLAG00000006318rbm510061.460Poecilia_latipinna
ENSDARG00000098280rbm510069.307ENSPMEG00000004295rbm510061.670Poecilia_mexicana
ENSDARG00000098280rbm57259.141ENSPMEG00000008651rbm59857.717Poecilia_mexicana
ENSDARG00000098280rbm510068.852ENSPREG00000003795rbm510061.416Poecilia_reticulata
ENSDARG00000098280rbm57562.555ENSPCAG00000005459RBM56866.169Procavia_capensis
ENSDARG00000098280rbm510063.245ENSPCOG00000025840RBM510057.679Propithecus_coquereli
ENSDARG00000098280rbm510062.914ENSPVAG00000006812RBM58666.418Pteropus_vampyrus
ENSDARG00000098280rbm58255.935ENSPNYG00000006361RBM59956.301Pundamilia_nyererei
ENSDARG00000098280rbm510069.935ENSPNYG00000014787rbm510063.501Pundamilia_nyererei
ENSDARG00000098280rbm510087.417ENSPNAG00000012070rbm510073.536Pygocentrus_nattereri
ENSDARG00000098280rbm510063.245ENSRNOG00000018153Rbm510056.506Rattus_norvegicus
ENSDARG00000098280rbm510063.245ENSRBIG00000012679RBM510057.913Rhinopithecus_bieti
ENSDARG00000098280rbm510063.245ENSRROG00000041331RBM510057.913Rhinopithecus_roxellana
ENSDARG00000098280rbm510063.245ENSSBOG00000006324RBM510057.796Saimiri_boliviensis_boliviensis
ENSDARG00000098280rbm510063.245ENSSHAG00000018260RBM510057.444Sarcophilus_harrisii
ENSDARG00000098280rbm510070.492ENSSFOG00015019645-10061.124Scleropages_formosus
ENSDARG00000098280rbm510071.803ENSSFOG00015019052rbm59464.129Scleropages_formosus
ENSDARG00000098280rbm510068.852ENSSMAG00000017106rbm510063.552Scophthalmus_maximus
ENSDARG00000098280rbm510071.148ENSSDUG00000019775rbm510064.557Seriola_dumerili
ENSDARG00000098280rbm510063.607ENSSLDG00000015996-10057.225Seriola_lalandi_dorsalis
ENSDARG00000098280rbm510071.148ENSSLDG00000002329rbm510064.138Seriola_lalandi_dorsalis
ENSDARG00000098280rbm57559.912ENSSARG00000009724-5376.923Sorex_araneus
ENSDARG00000098280rbm510055.432ENSSPUG00000001876RBM58557.568Sphenodon_punctatus
ENSDARG00000098280rbm510066.667ENSSPAG00000019638rbm510063.134Stegastes_partitus
ENSDARG00000098280rbm510062.500ENSSPAG00000020011-10056.507Stegastes_partitus
ENSDARG00000098280rbm510063.245ENSSSCG00000011395RBM59878.571Sus_scrofa
ENSDARG00000098280rbm57569.912ENSTGUG00000006417RBM59853.567Taeniopygia_guttata
ENSDARG00000098280rbm510068.627ENSTRUG00000008292rbm510065.948Takifugu_rubripes
ENSDARG00000098280rbm55876.493ENSTNIG00000014742rbm57273.134Tetraodon_nigroviridis
ENSDARG00000098280rbm510060.927ENSTBEG00000005424RBM58166.269Tupaia_belangeri
ENSDARG00000098280rbm59053.161ENSTTRG00000007717RBM510052.235Tursiops_truncatus
ENSDARG00000098280rbm510063.245ENSUAMG00000028347RBM510057.562Ursus_americanus
ENSDARG00000098280rbm510063.245ENSUMAG00000022027RBM510057.562Ursus_maritimus
ENSDARG00000098280rbm59962.752ENSVPAG00000009388RBM510055.253Vicugna_pacos
ENSDARG00000098280rbm510063.245ENSVVUG00000028647RBM510057.679Vulpes_vulpes
ENSDARG00000098280rbm510068.852ENSXMAG00000016369rbm510061.758Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome-IEAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005681spliceosomal complex-IEAComponent
GO:0008380RNA splicing-IEAProcess
GO:0016020membrane-IEAComponent
GO:0016021integral component of membrane-IEAComponent
GO:0042981regulation of apoptotic process-IEAProcess
GO:0046872metal ion binding-IEAFunction

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