EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098344 (Gene tree)
Gene ID: 445055
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 13195 bases
Position: chr2:4019538-4032732
Accession: ZDB-GENE-040801-185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133937	MMR_HSR1	PF01926.23	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000158335	-	1805	-	ENSDARP00000133937	205 (aa)	-	Q6DHC1

Gene Model

Click here to download ENSDARG00000098344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098344	rab18b	81	34.337	ENSDARG00000005651	hrasb	99	30.556
ENSDARG00000098344	rab18b	73	43.709	ENSDARG00000052290	rab33ba	63	43.709
ENSDARG00000098344	rab18b	79	46.914	ENSDARG00000114797	rab3b	74	46.914
ENSDARG00000098344	rab18b	71	41.497	ENSDARG00000003257	zgc:101559	63	41.497
ENSDARG00000098344	rab18b	80	37.725	ENSDARG00000020497	rab7a	81	37.725
ENSDARG00000098344	rab18b	80	33.537	ENSDARG00000013161	zgc:55558	87	33.537
ENSDARG00000098344	rab18b	87	34.637	ENSDARG00000100379	si:dkey-34d22.2	96	34.637
ENSDARG00000098344	rab18b	80	51.220	ENSDARG00000037884	rab30	81	51.220
ENSDARG00000098344	rab18b	90	30.108	ENSDARG00000006553	rras	96	30.964
ENSDARG00000098344	rab18b	83	45.029	ENSDARG00000014340	rab11al	79	45.029
ENSDARG00000098344	rab18b	80	34.146	ENSDARG00000010844	kras	87	34.146
ENSDARG00000098344	rab18b	97	37.688	ENSDARG00000034522	rab6ba	95	37.688
ENSDARG00000098344	rab18b	93	36.082	ENSDARG00000045027	rab9a	96	36.082
ENSDARG00000098344	rab18b	85	42.222	ENSDARG00000102580	CU571310.1	85	42.222
ENSDARG00000098344	rab18b	83	40.351	ENSDARG00000029885	rab41	79	40.351
ENSDARG00000098344	rab18b	77	30.769	ENSDARG00000015611	rasl11b	67	30.769
ENSDARG00000098344	rab18b	64	50.376	ENSDARG00000018107	rab3da	79	50.376
ENSDARG00000098344	rab18b	95	39.801	ENSDARG00000026098	si:dkey-13a21.4	96	39.801
ENSDARG00000098344	rab18b	95	45.641	ENSDARG00000058044	rab1ba	98	45.641
ENSDARG00000098344	rab18b	92	42.079	ENSDARG00000074246	rab14	93	42.079
ENSDARG00000098344	rab18b	83	39.766	ENSDARG00000031343	rab6bb	80	39.766
ENSDARG00000098344	rab18b	79	34.568	ENSDARG00000063321	rabl2	72	34.568
ENSDARG00000098344	rab18b	93	44.615	ENSDARG00000058425	rab35b	96	44.615
ENSDARG00000098344	rab18b	94	39.086	ENSDARG00000018602	rab5aa	91	39.086
ENSDARG00000098344	rab18b	75	44.872	ENSDARG00000057394	rab33a	66	44.872
ENSDARG00000098344	rab18b	98	31.000	ENSDARG00000038225	nras	100	31.000
ENSDARG00000098344	rab18b	93	41.026	ENSDARG00000034771	rab13	95	41.026
ENSDARG00000098344	rab18b	88	39.891	ENSDARG00000036501	rab39bb	86	39.891
ENSDARG00000098344	rab18b	87	47.222	ENSDARG00000033056	zgc:171927	84	47.222
ENSDARG00000098344	rab18b	85	46.023	ENSDARG00000037967	si:dkey-16l2.16	86	60.784
ENSDARG00000098344	rab18b	83	46.199	ENSDARG00000041878	rab11ba	79	46.914
ENSDARG00000098344	rab18b	79	47.239	ENSDARG00000103934	megf8	94	47.239
ENSDARG00000098344	rab18b	92	35.417	ENSDARG00000021287	rab7b	94	35.417
ENSDARG00000098344	rab18b	93	35.052	ENSDARG00000103391	rab9b	96	35.052
ENSDARG00000098344	rab18b	80	45.732	ENSDARG00000058800	rab25a	78	45.732
ENSDARG00000098344	rab18b	93	42.439	ENSDARG00000035188	rab14l	94	42.439
ENSDARG00000098344	rab18b	93	40.000	ENSDARG00000007257	rab5ab	89	40.000
ENSDARG00000098344	rab18b	91	48.168	ENSDARG00000020261	rab2a	92	46.701
ENSDARG00000098344	rab18b	83	46.199	ENSDARG00000090086	rab11bb	78	46.199
ENSDARG00000098344	rab18b	96	35.500	ENSDARG00000087243	zgc:100918	96	35.500
ENSDARG00000098344	rab18b	95	45.274	ENSDARG00000052263	rab1aa	96	45.274
ENSDARG00000098344	rab18b	81	34.940	ENSDARG00000098497	hrasa	87	34.940
ENSDARG00000098344	rab18b	85	40.341	ENSDARG00000034215	rab42a	83	40.341
ENSDARG00000098344	rab18b	79	31.325	ENSDARG00000070916	dnajc27	61	31.325
ENSDARG00000098344	rab18b	82	36.471	ENSDARG00000075285	si:ch73-116o1.2	81	36.471
ENSDARG00000098344	rab18b	80	43.636	ENSDARG00000015807	rab22a	84	43.636
ENSDARG00000098344	rab18b	82	35.882	ENSDARG00000062865	mras	83	35.714
ENSDARG00000098344	rab18b	95	45.685	ENSDARG00000056479	rab1bb	96	45.685
ENSDARG00000098344	rab18b	79	45.062	ENSDARG00000052954	rab25b	77	45.062
ENSDARG00000098344	rab18b	95	41.429	ENSDARG00000041450	rab11a	96	41.429
ENSDARG00000098344	rab18b	97	36.816	ENSDARG00000103714	rab6a	95	36.816
ENSDARG00000098344	rab18b	88	38.798	ENSDARG00000019312	rab39ba	86	38.798
ENSDARG00000098344	rab18b	79	48.780	ENSDARG00000089428	rab12	69	48.780
ENSDARG00000098344	rab18b	95	45.641	ENSDARG00000029663	rab1ab	96	45.641
ENSDARG00000098344	rab18b	100	83.902	ENSDARG00000055291	rab18a	100	83.902
ENSDARG00000098344	rab18b	73	37.333	ENSDARG00000036252	rras2	83	36.686
ENSDARG00000098344	rab18b	95	31.604	ENSDARG00000014058	rab36	81	31.604
ENSDARG00000098344	rab18b	58	32.500	ENSDARG00000045074	arl4d	59	32.500
ENSDARG00000098344	rab18b	83	35.465	ENSDARG00000004151	rab23	72	35.465
ENSDARG00000098344	rab18b	82	46.154	ENSDARG00000026484	rab15	78	46.154
ENSDARG00000098344	rab18b	71	53.425	ENSDARG00000102078	CABZ01072548.1	74	53.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098344	rab18b	100	88.350	ENSG00000099246	RAB18	100	92.063	Homo_sapiens
ENSDARG00000098344	rab18b	99	87.745	ENSAPOG00000019881	rab18b	99	87.745	Acanthochromis_polyacanthus
ENSDARG00000098344	rab18b	100	76.271	ENSAMEG00000015990	RAB18	100	76.271	Ailuropoda_melanoleuca
ENSDARG00000098344	rab18b	99	89.216	ENSACIG00000008102	rab18b	99	89.216	Amphilophus_citrinellus
ENSDARG00000098344	rab18b	99	87.745	ENSAOCG00000013479	rab18b	99	87.745	Amphiprion_ocellaris
ENSDARG00000098344	rab18b	99	88.235	ENSAPEG00000022923	rab18b	99	88.235	Amphiprion_percula
ENSDARG00000098344	rab18b	99	85.294	ENSATEG00000002952	rab18b	99	85.294	Anabas_testudineus
ENSDARG00000098344	rab18b	100	88.350	ENSANAG00000035856	RAB18	100	88.350	Aotus_nancymaae
ENSDARG00000098344	rab18b	99	89.216	ENSACLG00000015289	rab18b	99	89.216	Astatotilapia_calliptera
ENSDARG00000098344	rab18b	100	95.122	ENSAMXG00000042073	rab18b	100	95.122	Astyanax_mexicanus
ENSDARG00000098344	rab18b	100	85.437	ENSBTAG00000050873	-	100	85.437	Bos_taurus
ENSDARG00000098344	rab18b	100	87.864	ENSBTAG00000009871	RAB18	88	87.864	Bos_taurus
ENSDARG00000098344	rab18b	100	88.350	ENSCJAG00000045749	RAB18	100	88.350	Callithrix_jacchus
ENSDARG00000098344	rab18b	100	87.379	ENSCAFG00020003253	RAB18	100	87.379	Canis_lupus_dingo
ENSDARG00000098344	rab18b	100	87.864	ENSCHIG00000008749	RAB18	100	87.864	Capra_hircus
ENSDARG00000098344	rab18b	100	87.864	ENSTSYG00000013092	RAB18	100	87.864	Carlito_syrichta
ENSDARG00000098344	rab18b	100	87.864	ENSCPOG00000032827	RAB18	100	87.864	Cavia_porcellus
ENSDARG00000098344	rab18b	100	88.350	ENSCCAG00000006762	RAB18	100	88.350	Cebus_capucinus
ENSDARG00000098344	rab18b	100	88.350	ENSCATG00000009672	RAB18	100	88.350	Cercocebus_atys
ENSDARG00000098344	rab18b	100	88.350	ENSCSAG00000011749	RAB18	100	88.350	Chlorocebus_sabaeus
ENSDARG00000098344	rab18b	100	88.350	ENSCANG00000035397	RAB18	100	88.350	Colobus_angolensis_palliatus
ENSDARG00000098344	rab18b	100	87.864	ENSCGRG00001017519	Rab18	100	87.864	Cricetulus_griseus_chok1gshd
ENSDARG00000098344	rab18b	100	87.864	ENSCGRG00000017201	Rab18	100	87.864	Cricetulus_griseus_crigri
ENSDARG00000098344	rab18b	95	87.629	ENSCSEG00000016803	rab18b	99	87.629	Cynoglossus_semilaevis
ENSDARG00000098344	rab18b	100	88.350	ENSDNOG00000047713	RAB18	100	88.350	Dasypus_novemcinctus
ENSDARG00000098344	rab18b	55	92.035	ENSDNOG00000038845	-	75	92.035	Dasypus_novemcinctus
ENSDARG00000098344	rab18b	100	87.379	ENSDORG00000028596	-	100	87.379	Dipodomys_ordii
ENSDARG00000098344	rab18b	85	85.057	ENSDORG00000029360	-	83	85.057	Dipodomys_ordii
ENSDARG00000098344	rab18b	100	87.864	ENSEASG00005007164	RAB18	100	87.864	Equus_asinus_asinus
ENSDARG00000098344	rab18b	100	87.864	ENSECAG00000017521	RAB18	88	87.864	Equus_caballus
ENSDARG00000098344	rab18b	99	91.707	ENSELUG00000016450	rab18b	99	91.707	Esox_lucius
ENSDARG00000098344	rab18b	100	87.379	ENSFCAG00000027161	RAB18	100	87.379	Felis_catus
ENSDARG00000098344	rab18b	93	90.576	ENSFALG00000007160	RAB18	100	87.440	Ficedula_albicollis
ENSDARG00000098344	rab18b	99	86.275	ENSFHEG00000020035	rab18b	99	86.275	Fundulus_heteroclitus
ENSDARG00000098344	rab18b	99	81.373	ENSGMOG00000016608	rab18b	99	81.373	Gadus_morhua
ENSDARG00000098344	rab18b	100	88.350	ENSGALG00000007435	RAB18	100	88.350	Gallus_gallus
ENSDARG00000098344	rab18b	99	86.275	ENSGAFG00000008560	rab18b	99	86.275	Gambusia_affinis
ENSDARG00000098344	rab18b	99	86.275	ENSGACG00000016395	rab18b	99	86.275	Gasterosteus_aculeatus
ENSDARG00000098344	rab18b	100	88.350	ENSGGOG00000008086	RAB18	100	88.350	Gorilla_gorilla
ENSDARG00000098344	rab18b	99	89.216	ENSHBUG00000003696	rab18b	99	89.216	Haplochromis_burtoni
ENSDARG00000098344	rab18b	100	87.864	ENSHGLG00000004365	RAB18	100	87.864	Heterocephalus_glaber_female
ENSDARG00000098344	rab18b	99	74.146	ENSHGLG00000007301	-	95	74.146	Heterocephalus_glaber_female
ENSDARG00000098344	rab18b	99	74.146	ENSHGLG00100009117	-	95	74.146	Heterocephalus_glaber_male
ENSDARG00000098344	rab18b	100	87.864	ENSHGLG00100013089	-	100	87.864	Heterocephalus_glaber_male
ENSDARG00000098344	rab18b	99	85.784	ENSHCOG00000002217	rab18b	99	85.784	Hippocampus_comes
ENSDARG00000098344	rab18b	100	91.220	ENSIPUG00000010859	rab18b	100	91.220	Ictalurus_punctatus
ENSDARG00000098344	rab18b	100	87.864	ENSSTOG00000014560	-	100	87.864	Ictidomys_tridecemlineatus
ENSDARG00000098344	rab18b	99	85.784	ENSKMAG00000007364	rab18b	99	85.784	Kryptolebias_marmoratus
ENSDARG00000098344	rab18b	99	86.275	ENSLBEG00000019428	rab18b	99	86.275	Labrus_bergylta
ENSDARG00000098344	rab18b	100	77.561	ENSLACG00000011256	rab18b	100	77.561	Latimeria_chalumnae
ENSDARG00000098344	rab18b	93	90.576	ENSLAFG00000015582	RAB18	100	87.864	Loxodonta_africana
ENSDARG00000098344	rab18b	100	88.350	ENSMFAG00000006430	RAB18	100	88.350	Macaca_fascicularis
ENSDARG00000098344	rab18b	100	86.893	ENSMMUG00000046971	RAB18	74	86.893	Macaca_mulatta
ENSDARG00000098344	rab18b	100	88.350	ENSMNEG00000038180	RAB18	100	88.350	Macaca_nemestrina
ENSDARG00000098344	rab18b	100	88.350	ENSMLEG00000033595	RAB18	100	88.350	Mandrillus_leucophaeus
ENSDARG00000098344	rab18b	99	85.784	ENSMAMG00000018445	rab18b	99	85.784	Mastacembelus_armatus
ENSDARG00000098344	rab18b	99	89.216	ENSMZEG00005008244	rab18b	99	89.216	Maylandia_zebra
ENSDARG00000098344	rab18b	100	78.049	ENSMAUG00000020698	-	100	78.049	Mesocricetus_auratus
ENSDARG00000098344	rab18b	93	90.576	ENSMICG00000017280	RAB18	100	87.864	Microcebus_murinus
ENSDARG00000098344	rab18b	100	87.864	ENSMOCG00000013044	Rab18	100	87.864	Microtus_ochrogaster
ENSDARG00000098344	rab18b	91	76.263	ENSMMOG00000017849	rab18b	99	74.074	Mola_mola
ENSDARG00000098344	rab18b	100	78.537	ENSMODG00000024936	-	100	78.537	Monodelphis_domestica
ENSDARG00000098344	rab18b	100	88.293	ENSMODG00000008253	RAB18	100	88.293	Monodelphis_domestica
ENSDARG00000098344	rab18b	99	86.829	ENSMALG00000005069	rab18b	99	86.829	Monopterus_albus
ENSDARG00000098344	rab18b	100	88.350	MGP_CAROLIEiJ_G0021978	Rab18	100	88.350	Mus_caroli
ENSDARG00000098344	rab18b	100	88.350	ENSMUSG00000073639	Rab18	100	88.350	Mus_musculus
ENSDARG00000098344	rab18b	100	88.350	MGP_PahariEiJ_G0018716	Rab18	100	88.350	Mus_pahari
ENSDARG00000098344	rab18b	100	88.350	MGP_SPRETEiJ_G0022894	Rab18	100	88.350	Mus_spretus
ENSDARG00000098344	rab18b	100	87.379	ENSMPUG00000010592	RAB18	100	87.379	Mustela_putorius_furo
ENSDARG00000098344	rab18b	100	76.695	ENSMLUG00000027295	RAB18	100	76.695	Myotis_lucifugus
ENSDARG00000098344	rab18b	100	87.379	ENSNGAG00000001465	Rab18	100	87.379	Nannospalax_galili
ENSDARG00000098344	rab18b	99	88.725	ENSNBRG00000008137	rab18b	99	88.725	Neolamprologus_brichardi
ENSDARG00000098344	rab18b	100	88.350	ENSNLEG00000016970	RAB18	100	88.350	Nomascus_leucogenys
ENSDARG00000098344	rab18b	100	87.864	ENSODEG00000004150	-	100	87.864	Octodon_degus
ENSDARG00000098344	rab18b	99	88.725	ENSONIG00000018673	rab18b	99	88.725	Oreochromis_niloticus
ENSDARG00000098344	rab18b	91	91.979	ENSOANG00000021391	RAB18	100	87.864	Ornithorhynchus_anatinus
ENSDARG00000098344	rab18b	100	87.379	ENSOCUG00000022307	RAB18	100	87.379	Oryctolagus_cuniculus
ENSDARG00000098344	rab18b	99	85.294	ENSORLG00000009609	rab18b	99	85.294	Oryzias_latipes
ENSDARG00000098344	rab18b	99	85.294	ENSORLG00020011590	rab18b	99	85.294	Oryzias_latipes_hni
ENSDARG00000098344	rab18b	99	85.294	ENSORLG00015007182	rab18b	99	85.294	Oryzias_latipes_hsok
ENSDARG00000098344	rab18b	99	85.294	ENSOMEG00000007546	rab18b	99	85.294	Oryzias_melastigma
ENSDARG00000098344	rab18b	93	90.576	ENSOGAG00000028015	RAB18	100	87.864	Otolemur_garnettii
ENSDARG00000098344	rab18b	100	87.864	ENSOARG00000016208	RAB18	100	87.864	Ovis_aries
ENSDARG00000098344	rab18b	100	88.350	ENSPPAG00000041625	RAB18	100	88.350	Pan_paniscus
ENSDARG00000098344	rab18b	100	87.379	ENSPPRG00000010314	RAB18	100	87.379	Panthera_pardus
ENSDARG00000098344	rab18b	100	87.379	ENSPTIG00000011667	RAB18	100	87.379	Panthera_tigris_altaica
ENSDARG00000098344	rab18b	100	88.350	ENSPTRG00000002384	RAB18	100	88.350	Pan_troglodytes
ENSDARG00000098344	rab18b	100	88.350	ENSPANG00000023005	RAB18	100	88.350	Papio_anubis
ENSDARG00000098344	rab18b	98	85.366	ENSPMAG00000005322	rab18b	99	85.366	Petromyzon_marinus
ENSDARG00000098344	rab18b	100	88.293	ENSPCIG00000028705	-	88	88.293	Phascolarctos_cinereus
ENSDARG00000098344	rab18b	99	86.765	ENSPFOG00000013491	rab18b	99	86.765	Poecilia_formosa
ENSDARG00000098344	rab18b	99	86.765	ENSPLAG00000019136	rab18b	99	86.765	Poecilia_latipinna
ENSDARG00000098344	rab18b	99	86.765	ENSPMEG00000008223	rab18b	99	86.765	Poecilia_mexicana
ENSDARG00000098344	rab18b	100	88.350	ENSPPYG00000002172	RAB18	100	88.350	Pongo_abelii
ENSDARG00000098344	rab18b	93	90.576	ENSPCOG00000018906	RAB18	100	87.864	Propithecus_coquereli
ENSDARG00000098344	rab18b	99	89.216	ENSPNYG00000001751	rab18b	99	89.216	Pundamilia_nyererei
ENSDARG00000098344	rab18b	100	94.146	ENSPNAG00000002404	rab18b	100	94.146	Pygocentrus_nattereri
ENSDARG00000098344	rab18b	100	87.864	ENSRNOG00000018972	Rab18	100	87.864	Rattus_norvegicus
ENSDARG00000098344	rab18b	100	87.864	ENSRBIG00000035948	RAB18	100	87.864	Rhinopithecus_bieti
ENSDARG00000098344	rab18b	100	88.350	ENSRROG00000040563	RAB18	100	88.350	Rhinopithecus_roxellana
ENSDARG00000098344	rab18b	100	88.780	ENSSHAG00000007613	RAB18	100	88.780	Sarcophilus_harrisii
ENSDARG00000098344	rab18b	99	86.765	ENSSMAG00000011814	rab18b	99	86.765	Scophthalmus_maximus
ENSDARG00000098344	rab18b	99	88.235	ENSSDUG00000005960	rab18b	99	88.235	Seriola_dumerili
ENSDARG00000098344	rab18b	99	88.235	ENSSLDG00000006014	rab18b	99	88.235	Seriola_lalandi_dorsalis
ENSDARG00000098344	rab18b	99	88.725	ENSSPAG00000020875	rab18b	99	88.725	Stegastes_partitus
ENSDARG00000098344	rab18b	100	87.864	ENSSSCG00000028655	RAB18	100	87.864	Sus_scrofa
ENSDARG00000098344	rab18b	93	79.358	ENSTGUG00000001105	-	100	77.350	Taeniopygia_guttata
ENSDARG00000098344	rab18b	99	86.765	ENSTRUG00000004283	rab18b	99	86.765	Takifugu_rubripes
ENSDARG00000098344	rab18b	99	86.829	ENSTNIG00000007882	rab18b	99	86.829	Tetraodon_nigroviridis
ENSDARG00000098344	rab18b	100	87.379	ENSVVUG00000001705	RAB18	100	87.379	Vulpes_vulpes
ENSDARG00000098344	rab18b	99	85.784	ENSXMAG00000006945	rab18b	99	85.784	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0001654	eye development	21473985.	IMP	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007420	brain development	21473985.	IMP	Process
GO:0015031	protein transport	-	IEA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0034389	lipid droplet organization	21873635.	IBA	Process
GO:0043009	chordate embryonic development	21473985.	IMP	Process