EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000098375 (Gene tree)
Gene ID
327078
Gene Symbol
polr1a
Alias
fa26a03|sb:cb935|wu:fa26a03
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
61529 bases
Position
chr14:16151368-16212896
Accession
ZDB-GENE-030131-5286
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000136059RNA_pol_Rpb1_5PF04998.171.8e-9811
ENSDARP00000130633RNA_pol_Rpb1_5PF04998.171.8e-9811
ENSDARP00000136059RNA_pol_Rpb1_4PF05000.179.7e-2411
ENSDARP00000130633RNA_pol_Rpb1_4PF05000.179.8e-2411
ENSDARP00000136059RNA_pol_Rpb1_2PF00623.207.4e-6911
ENSDARP00000130633RNA_pol_Rpb1_2PF00623.207.5e-6911
ENSDARP00000136059RNA_pol_Rpb1_3PF04983.183.5e-3411
ENSDARP00000130633RNA_pol_Rpb1_3PF04983.183.5e-3411
ENSDARP00000136059RNA_pol_Rpb1_1PF04997.121.1e-2511
ENSDARP00000130633RNA_pol_Rpb1_1PF04997.121.2e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000159352-5286-ENSDARP000001360591684 (aa)-A0A0R4IPG4
ENSDART00000160973-7583XM_001922804ENSDARP000001306331693 (aa)XP_001922839A0A0R4I9V4
Gene Model
Click here to download ENSDARG00000098375's gene model file
Pathways
Pathway IDPathway NameSource
dre03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098375's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000098375polr1a5962.687ENSDARG00000102569polr3a6962.687
ENSDARG00000098375polr1a7644.231ENSDARG00000099966polr2a5344.231
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000098375polr1a10067.077ENSG00000068654POLR1A10067.034Homo_sapiens
ENSDARG00000098375polr1a7073.971ENSAPOG00000017945polr1a9974.223Acanthochromis_polyacanthus
ENSDARG00000098375polr1a10066.938ENSAMEG00000005807POLR1A10070.245Ailuropoda_melanoleuca
ENSDARG00000098375polr1a9774.652ENSACIG00000022147polr1a10074.791Amphilophus_citrinellus
ENSDARG00000098375polr1a10072.355ENSAOCG00000017336polr1a10074.363Amphiprion_ocellaris
ENSDARG00000098375polr1a10072.238ENSAPEG00000016105polr1a9877.083Amphiprion_percula
ENSDARG00000098375polr1a10072.924ENSATEG00000016773polr1a10072.982Anabas_testudineus
ENSDARG00000098375polr1a8668.182ENSAPLG00000013871POLR1A9968.182Anas_platyrhynchos
ENSDARG00000098375polr1a9964.959ENSACAG00000012141POLR1A9964.918Anolis_carolinensis
ENSDARG00000098375polr1a10066.454ENSANAG00000033927POLR1A10066.570Aotus_nancymaae
ENSDARG00000098375polr1a10068.651ENSACLG00000020541polr1a10068.692Astatotilapia_calliptera
ENSDARG00000098375polr1a10066.995ENSBTAG00000006481POLR1A10067.053Bos_taurus
ENSDARG00000098375polr1a9840.000WBGene00012999rpoa-19837.770Caenorhabditis_elegans
ENSDARG00000098375polr1a10066.647ENSCJAG00000019547POLR1A10066.879Callithrix_jacchus
ENSDARG00000098375polr1a10066.493ENSCAFG00000007613POLR1A10067.441Canis_familiaris
ENSDARG00000098375polr1a10066.529ENSCAFG00020014752POLR1A10067.284Canis_lupus_dingo
ENSDARG00000098375polr1a10067.192ENSCHIG00000018204POLR1A10067.017Capra_hircus
ENSDARG00000098375polr1a10066.279ENSTSYG00000002761POLR1A10065.533Carlito_syrichta
ENSDARG00000098375polr1a9764.149ENSCAPG00000010132POLR1A10064.402Cavia_aperea
ENSDARG00000098375polr1a10067.034ENSCPOG00000012350POLR1A10067.286Cavia_porcellus
ENSDARG00000098375polr1a10066.531ENSCCAG00000019839POLR1A10067.053Cebus_capucinus
ENSDARG00000098375polr1a10067.111ENSCATG00000029786POLR1A10066.976Cercocebus_atys
ENSDARG00000098375polr1a10066.067ENSCLAG00000005187POLR1A10066.357Chinchilla_lanigera
ENSDARG00000098375polr1a10067.053ENSCSAG00000016251POLR1A10066.976Chlorocebus_sabaeus
ENSDARG00000098375polr1a9967.446ENSCPBG00000001115POLR1A9967.700Chrysemys_picta_bellii
ENSDARG00000098375polr1a9946.678ENSCSAVG00000007184-9947.764Ciona_savignyi
ENSDARG00000098375polr1a10064.290ENSCANG00000031785POLR1A10064.157Colobus_angolensis_palliatus
ENSDARG00000098375polr1a9667.442ENSCGRG00001006651Polr1a10068.191Cricetulus_griseus_chok1gshd
ENSDARG00000098375polr1a6067.507ENSCGRG00000010834Polr1a10068.257Cricetulus_griseus_crigri
ENSDARG00000098375polr1a10069.254ENSCSEG00000020190polr1a10068.661Cynoglossus_semilaevis
ENSDARG00000098375polr1a10069.338ENSCVAG00000020941polr1a10069.575Cyprinodon_variegatus
ENSDARG00000098375polr1a10063.726ENSDNOG00000010829POLR1A10063.494Dasypus_novemcinctus
ENSDARG00000098375polr1a10065.994ENSDORG00000008298Polr1a10065.882Dipodomys_ordii
ENSDARG00000098375polr1a7944.290FBgn0019938RpI19942.874Drosophila_melanogaster
ENSDARG00000098375polr1a7181.250ENSETEG00000000412-7181.250Echinops_telfairi
ENSDARG00000098375polr1a8947.880ENSEBUG00000005667-9948.435Eptatretus_burgeri
ENSDARG00000098375polr1a10067.226ENSEASG00005001625POLR1A10067.342Equus_asinus_asinus
ENSDARG00000098375polr1a10067.284ENSECAG00000030510-10070.600Equus_caballus
ENSDARG00000098375polr1a10067.284ENSECAG00000010092POLR1A10070.600Equus_caballus
ENSDARG00000098375polr1a10067.284ENSECAG00000036306-10070.600Equus_caballus
ENSDARG00000098375polr1a8479.400ENSEEUG00000000676POLR1A8479.400Erinaceus_europaeus
ENSDARG00000098375polr1a10076.333ENSELUG00000012769polr1a9976.098Esox_lucius
ENSDARG00000098375polr1a10066.802ENSFCAG00000008966POLR1A10067.499Felis_catus
ENSDARG00000098375polr1a9967.294ENSFALG00000010082POLR1A9967.294Ficedula_albicollis
ENSDARG00000098375polr1a10066.492ENSFDAG00000013726POLR1A10066.608Fukomys_damarensis
ENSDARG00000098375polr1a10068.042ENSFHEG00000005996polr1a10068.639Fundulus_heteroclitus
ENSDARG00000098375polr1a10064.772ENSGMOG00000002230polr1a10064.911Gadus_morhua
ENSDARG00000098375polr1a9064.028ENSGALG00000038160-9963.964Gallus_gallus
ENSDARG00000098375polr1a10070.217ENSGAFG00000015266polr1a10070.492Gambusia_affinis
ENSDARG00000098375polr1a10069.695ENSGACG00000018791polr1a10070.155Gasterosteus_aculeatus
ENSDARG00000098375polr1a8968.442ENSGAGG00000004984-9572.866Gopherus_agassizii
ENSDARG00000098375polr1a10066.628ENSGGOG00000001788POLR1A10067.092Gorilla_gorilla
ENSDARG00000098375polr1a9070.816ENSHBUG00000020021polr1a9774.167Haplochromis_burtoni
ENSDARG00000098375polr1a10066.764ENSHGLG00000006334POLR1A10066.744Heterocephalus_glaber_female
ENSDARG00000098375polr1a10066.570ENSHGLG00100006614POLR1A10066.551Heterocephalus_glaber_male
ENSDARG00000098375polr1a10069.444ENSHCOG00000003345polr1a10069.444Hippocampus_comes
ENSDARG00000098375polr1a10077.752ENSIPUG00000013174polr1a10077.752Ictalurus_punctatus
ENSDARG00000098375polr1a10065.253ENSSTOG00000012580POLR1A10065.159Ictidomys_tridecemlineatus
ENSDARG00000098375polr1a9966.706ENSJJAG00000013113Polr1a9967.172Jaculus_jaculus
ENSDARG00000098375polr1a10071.915ENSKMAG00000007399polr1a10071.857Kryptolebias_marmoratus
ENSDARG00000098375polr1a9574.735ENSLBEG00000015401polr1a9975.159Labrus_bergylta
ENSDARG00000098375polr1a5372.579ENSLACG00000003218polr1a9972.579Latimeria_chalumnae
ENSDARG00000098375polr1a10073.140ENSLOCG00000010881polr1a10072.464Lepisosteus_oculatus
ENSDARG00000098375polr1a10067.188ENSLAFG00000014948POLR1A10067.264Loxodonta_africana
ENSDARG00000098375polr1a10066.589ENSMFAG00000046097POLR1A10066.918Macaca_fascicularis
ENSDARG00000098375polr1a10066.531ENSMMUG00000015815POLR1A10066.860Macaca_mulatta
ENSDARG00000098375polr1a10066.589ENSMNEG00000043313POLR1A10066.918Macaca_nemestrina
ENSDARG00000098375polr1a10066.879ENSMLEG00000042428POLR1A10066.744Mandrillus_leucophaeus
ENSDARG00000098375polr1a10071.311ENSMAMG00000016565polr1a10072.199Mastacembelus_armatus
ENSDARG00000098375polr1a10072.567ENSMZEG00005004915polr1a10072.743Maylandia_zebra
ENSDARG00000098375polr1a9963.836ENSMGAG00000013111POLR1A9963.910Meleagris_gallopavo
ENSDARG00000098375polr1a9166.751ENSMAUG00000008497Polr1a10066.646Mesocricetus_auratus
ENSDARG00000098375polr1a10067.071ENSMICG00000000757POLR1A10067.572Microcebus_murinus
ENSDARG00000098375polr1a10066.802ENSMOCG00000000122Polr1a10066.513Microtus_ochrogaster
ENSDARG00000098375polr1a10070.699ENSMMOG00000010216polr1a10070.858Mola_mola
ENSDARG00000098375polr1a10063.772ENSMODG00000009335POLR1A10063.809Monodelphis_domestica
ENSDARG00000098375polr1a10072.371ENSMALG00000013363polr1a10072.780Monopterus_albus
ENSDARG00000098375polr1a10066.028MGP_CAROLIEiJ_G0028494Polr1a10066.202Mus_caroli
ENSDARG00000098375polr1a10066.318ENSMUSG00000049553Polr1a10066.609Mus_musculus
ENSDARG00000098375polr1a10066.202MGP_PahariEiJ_G0022230Polr1a10065.993Mus_pahari
ENSDARG00000098375polr1a10065.279MGP_SPRETEiJ_G0029499Polr1a10064.347Mus_spretus
ENSDARG00000098375polr1a10066.299ENSMPUG00000009135POLR1A10067.150Mustela_putorius_furo
ENSDARG00000098375polr1a10067.376ENSMLUG00000015723POLR1A10067.376Myotis_lucifugus
ENSDARG00000098375polr1a9966.802ENSNGAG00000017907Polr1a9966.997Nannospalax_galili
ENSDARG00000098375polr1a10072.626ENSNBRG00000000519polr1a10072.626Neolamprologus_brichardi
ENSDARG00000098375polr1a10064.764ENSNLEG00000002264POLR1A10065.170Nomascus_leucogenys
ENSDARG00000098375polr1a7987.402ENSMEUG00000011665-7987.402Notamacropus_eugenii
ENSDARG00000098375polr1a9962.279ENSOPRG00000008269POLR1A9962.448Ochotona_princeps
ENSDARG00000098375polr1a10066.376ENSODEG00000003542POLR1A10066.551Octodon_degus
ENSDARG00000098375polr1a10072.791ENSONIG00000015895polr1a10072.264Oreochromis_niloticus
ENSDARG00000098375polr1a10067.226ENSOCUG00000010138POLR1A10067.439Oryctolagus_cuniculus
ENSDARG00000098375polr1a10071.637ENSORLG00000008753polr1a9971.387Oryzias_latipes
ENSDARG00000098375polr1a10070.029ENSORLG00020020726polr1a9970.170Oryzias_latipes_hni
ENSDARG00000098375polr1a10066.765ENSORLG00015016071polr1a9876.596Oryzias_latipes_hsok
ENSDARG00000098375polr1a10066.763ENSOGAG00000004031POLR1A10066.937Otolemur_garnettii
ENSDARG00000098375polr1a10067.206ENSOARG00000020601POLR1A10066.686Ovis_aries
ENSDARG00000098375polr1a10066.396ENSPPAG00000042450POLR1A10066.860Pan_paniscus
ENSDARG00000098375polr1a10067.324ENSPPRG00000006702POLR1A10067.557Panthera_pardus
ENSDARG00000098375polr1a10066.859ENSPTIG00000018783POLR1A10067.091Panthera_tigris_altaica
ENSDARG00000098375polr1a10066.859ENSPTRG00000012147POLR1A10067.034Pan_troglodytes
ENSDARG00000098375polr1a10066.937ENSPANG00000025908POLR1A10066.802Papio_anubis
ENSDARG00000098375polr1a10072.044ENSPKIG00000005468polr1a9973.311Paramormyrops_kingsleyae
ENSDARG00000098375polr1a6366.449ENSPSIG00000009321-9967.102Pelodiscus_sinensis
ENSDARG00000098375polr1a5574.436ENSPMGG00000009718polr1a9574.436Periophthalmus_magnuspinnatus
ENSDARG00000098375polr1a10066.705ENSPEMG00000022224Polr1a10066.783Peromyscus_maniculatus_bairdii
ENSDARG00000098375polr1a9565.692ENSPCIG00000004222POLR1A9966.239Phascolarctos_cinereus
ENSDARG00000098375polr1a10071.454ENSPFOG00000005025polr1a10071.904Poecilia_formosa
ENSDARG00000098375polr1a10071.663ENSPLAG00000021389polr1a10072.014Poecilia_latipinna
ENSDARG00000098375polr1a10069.560ENSPMEG00000006463polr1a10070.457Poecilia_mexicana
ENSDARG00000098375polr1a10071.295ENSPREG00000002389polr1a10071.820Poecilia_reticulata
ENSDARG00000098375polr1a10065.992ENSPPYG00000012217POLR1A10066.744Pongo_abelii
ENSDARG00000098375polr1a9164.907ENSPCAG00000011582POLR1A9164.907Procavia_capensis
ENSDARG00000098375polr1a10067.787ENSPCOG00000026987POLR1A10067.961Propithecus_coquereli
ENSDARG00000098375polr1a9566.593ENSPVAG00000012674POLR1A9566.986Pteropus_vampyrus
ENSDARG00000098375polr1a10072.567ENSPNYG00000000026polr1a10072.685Pundamilia_nyererei
ENSDARG00000098375polr1a10076.937ENSPNAG00000019223polr1a10077.066Pygocentrus_nattereri
ENSDARG00000098375polr1a10066.859ENSRNOG00000009545Polr1a10067.188Rattus_norvegicus
ENSDARG00000098375polr1a10066.415ENSRBIG00000028335POLR1A10066.860Rhinopithecus_bieti
ENSDARG00000098375polr1a10066.357ENSRROG00000031473POLR1A10066.802Rhinopithecus_roxellana
ENSDARG00000098375polr1a9937.161YOR341WRPA1909937.217Saccharomyces_cerevisiae
ENSDARG00000098375polr1a10066.415ENSSBOG00000030262POLR1A10066.647Saimiri_boliviensis_boliviensis
ENSDARG00000098375polr1a10061.073ENSSHAG00000014739POLR1A10061.543Sarcophilus_harrisii
ENSDARG00000098375polr1a10071.829ENSSFOG00015019716polr1a10071.890Scleropages_formosus
ENSDARG00000098375polr1a10072.030ENSSMAG00000014342polr1a10071.796Scophthalmus_maximus
ENSDARG00000098375polr1a10072.552ENSSDUG00000014631polr1a10073.423Seriola_dumerili
ENSDARG00000098375polr1a10071.521ENSSLDG00000024095polr1a10072.160Seriola_lalandi_dorsalis
ENSDARG00000098375polr1a7095.122ENSSARG00000003136-7095.122Sorex_araneus
ENSDARG00000098375polr1a10064.982ENSSPUG00000004215POLR1A9872.821Sphenodon_punctatus
ENSDARG00000098375polr1a6577.412ENSSPAG00000016341polr1a9477.412Stegastes_partitus
ENSDARG00000098375polr1a8468.366ENSSSCG00000008226POLR1A9968.277Sus_scrofa
ENSDARG00000098375polr1a9966.568ENSTGUG00000010704POLR1A9966.568Taeniopygia_guttata
ENSDARG00000098375polr1a10069.701ENSTRUG00000002210polr1a9969.484Takifugu_rubripes
ENSDARG00000098375polr1a10064.876ENSTNIG00000010116polr1a10064.760Tetraodon_nigroviridis
ENSDARG00000098375polr1a7381.416ENSTBEG00000008646POLR1A7481.416Tupaia_belangeri
ENSDARG00000098375polr1a10064.352ENSTTRG00000008597POLR1A10064.352Tursiops_truncatus
ENSDARG00000098375polr1a6968.497ENSUAMG00000012158-9468.782Ursus_americanus
ENSDARG00000098375polr1a10066.338ENSUMAG00000006700POLR1A9770.021Ursus_maritimus
ENSDARG00000098375polr1a10065.975ENSVVUG00000001245POLR1A10067.286Vulpes_vulpes
ENSDARG00000098375polr1a10064.315ENSXETG00000001952polr1a10065.229Xenopus_tropicalis
ENSDARG00000098375polr1a10071.712ENSXMAG00000004032polr1a10072.154Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001054RNA polymerase I activity21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity21873635.IBAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005736RNA polymerase I complex21873635.IBAComponent
GO:0006351transcription, DNA-templated-IEAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0014032neural crest cell development25913037.IMPProcess
GO:0016740transferase activity-IEAFunction
GO:0016779nucleotidyltransferase activity-IEAFunction
GO:0048703embryonic viscerocranium morphogenesis25913037.IMPProcess

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