EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098574 (Gene tree)
Gene ID: 321886
Gene Symbol: srsf11
Alias: sfrs11|wu:fb37g02|zgc:55515
Full Name: serine/arginine-rich splicing factor 11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12021 bases
Position: chr11:45388126-45400146
Accession: ZDB-GENE-030131-605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139328	RRM_1	PF00076.22	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000171274	-	550	-	ENSDARP00000139328	140 (aa)	-	A0A0R4IX38
ENSDART00000161732	-	626	-	-	- (aa)	-	-
ENSDART00000169036	-	782	-	-	- (aa)	-	-
ENSDART00000166697	-	436	-	-	- (aa)	-	-
ENSDART00000167826	-	2179	XM_005169421	ENSDARP00000138275	461 (aa)	XP_005169478	A0A0R4IUB5
ENSDART00000168691	-	615	-	ENSDARP00000134255	91 (aa)	-	A0A0R4IHS9
ENSDART00000159764	-	600	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000098574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098574	srsf11	95	70.930	ENSG00000153914	SREK1	81	71.605	Homo_sapiens
ENSDARG00000098574	srsf11	95	83.721	ENSG00000116754	SRSF11	70	80.000	Homo_sapiens
ENSDARG00000098574	srsf11	96	83.908	ENSAPOG00000007244	-	89	66.129	Acanthochromis_polyacanthus
ENSDARG00000098574	srsf11	95	83.721	ENSAPOG00000004488	-	77	86.747	Acanthochromis_polyacanthus
ENSDARG00000098574	srsf11	91	65.060	ENSACIG00000015055	-	66	65.854	Amphilophus_citrinellus
ENSDARG00000098574	srsf11	97	88.636	ENSACIG00000012348	-	93	88.636	Amphilophus_citrinellus
ENSDARG00000098574	srsf11	95	83.721	ENSACIG00000018075	-	77	86.747	Amphilophus_citrinellus
ENSDARG00000098574	srsf11	98	83.516	ENSAOCG00000000739	-	97	83.516	Amphiprion_ocellaris
ENSDARG00000098574	srsf11	92	65.476	ENSAOCG00000024368	-	85	65.476	Amphiprion_ocellaris
ENSDARG00000098574	srsf11	92	86.905	ENSAPEG00000003142	SRSF11	87	86.905	Amphiprion_percula
ENSDARG00000098574	srsf11	95	83.721	ENSAPEG00000003619	SRSF11	77	86.747	Amphiprion_percula
ENSDARG00000098574	srsf11	90	67.073	ENSAPEG00000002218	-	89	67.073	Amphiprion_percula
ENSDARG00000098574	srsf11	95	83.721	ENSATEG00000007534	-	77	86.747	Anabas_testudineus
ENSDARG00000098574	srsf11	98	85.714	ENSATEG00000011691	srsf11	84	85.714	Anabas_testudineus
ENSDARG00000098574	srsf11	95	63.953	ENSATEG00000009464	-	95	63.953	Anabas_testudineus
ENSDARG00000098574	srsf11	95	70.930	ENSANAG00000031358	SREK1	81	71.605	Aotus_nancymaae
ENSDARG00000098574	srsf11	96	83.908	ENSACLG00000000623	srsf11	87	87.059	Astatotilapia_calliptera
ENSDARG00000098574	srsf11	93	69.412	ENSBTAG00000007321	SREK1	81	70.370	Bos_taurus
ENSDARG00000098574	srsf11	93	70.588	ENSCJAG00000015950	SREK1	81	71.605	Callithrix_jacchus
ENSDARG00000098574	srsf11	95	69.767	ENSCAFG00020019449	-	81	70.370	Canis_lupus_dingo
ENSDARG00000098574	srsf11	93	81.176	ENSCAFG00020017255	-	81	81.522	Canis_lupus_dingo
ENSDARG00000098574	srsf11	89	70.370	ENSCHIG00000025052	-	81	70.370	Capra_hircus
ENSDARG00000098574	srsf11	93	81.176	ENSCHIG00000025295	SRSF11	78	81.522	Capra_hircus
ENSDARG00000098574	srsf11	93	76.471	ENSTSYG00000033270	-	63	73.034	Carlito_syrichta
ENSDARG00000098574	srsf11	95	69.767	ENSTSYG00000036957	SREK1	81	70.370	Carlito_syrichta
ENSDARG00000098574	srsf11	95	70.930	ENSCCAG00000020591	SREK1	81	71.605	Cebus_capucinus
ENSDARG00000098574	srsf11	93	70.588	ENSCATG00000031482	SREK1	81	71.605	Cercocebus_atys
ENSDARG00000098574	srsf11	95	70.930	ENSCPBG00000026866	SREK1	66	70.930	Chrysemys_picta_bellii
ENSDARG00000098574	srsf11	91	74.699	ENSCPBG00000022430	-	74	74.699	Chrysemys_picta_bellii
ENSDARG00000098574	srsf11	93	70.588	ENSCANG00000030421	SREK1	81	71.605	Colobus_angolensis_palliatus
ENSDARG00000098574	srsf11	93	64.706	ENSCSEG00000013934	-	90	64.557	Cynoglossus_semilaevis
ENSDARG00000098574	srsf11	95	63.953	ENSCVAG00000002404	-	85	58.095	Cyprinodon_variegatus
ENSDARG00000098574	srsf11	95	68.605	ENSDORG00000023160	-	65	68.605	Dipodomys_ordii
ENSDARG00000098574	srsf11	93	81.176	ENSEASG00005007847	SRSF11	81	81.522	Equus_asinus_asinus
ENSDARG00000098574	srsf11	95	69.767	ENSEASG00005006832	-	71	70.370	Equus_asinus_asinus
ENSDARG00000098574	srsf11	95	69.767	ENSECAG00000035731	-	70	70.370	Equus_caballus
ENSDARG00000098574	srsf11	95	83.721	ENSFCAG00000034448	-	71	80.000	Felis_catus
ENSDARG00000098574	srsf11	89	70.370	ENSFCAG00000036884	-	81	70.370	Felis_catus
ENSDARG00000098574	srsf11	93	63.529	ENSFHEG00000020959	-	81	57.692	Fundulus_heteroclitus
ENSDARG00000098574	srsf11	96	82.759	ENSGALG00000011305	SRSF11	53	75.758	Gallus_gallus
ENSDARG00000098574	srsf11	93	70.588	ENSGALG00000043541	SREK1	82	71.605	Gallus_gallus
ENSDARG00000098574	srsf11	91	66.265	ENSGAFG00000001732	-	68	66.265	Gambusia_affinis
ENSDARG00000098574	srsf11	100	82.609	ENSGAGG00000022411	-	89	82.609	Gopherus_agassizii
ENSDARG00000098574	srsf11	95	70.930	ENSGAGG00000006087	SREK1	66	70.930	Gopherus_agassizii
ENSDARG00000098574	srsf11	95	70.930	ENSGGOG00000004737	SREK1	81	71.605	Gorilla_gorilla
ENSDARG00000098574	srsf11	95	63.953	ENSHBUG00000007082	-	64	63.953	Haplochromis_burtoni
ENSDARG00000098574	srsf11	91	63.855	ENSHCOG00000017228	-	83	62.222	Hippocampus_comes
ENSDARG00000098574	srsf11	96	83.908	ENSHCOG00000016860	-	87	87.059	Hippocampus_comes
ENSDARG00000098574	srsf11	93	69.412	ENSSTOG00000008850	SREK1	81	70.370	Ictidomys_tridecemlineatus
ENSDARG00000098574	srsf11	95	67.442	ENSJJAG00000008846	-	67	67.442	Jaculus_jaculus
ENSDARG00000098574	srsf11	91	66.265	ENSLBEG00000022954	-	60	66.265	Labrus_bergylta
ENSDARG00000098574	srsf11	96	85.057	ENSLBEG00000024167	srsf11	87	88.235	Labrus_bergylta
ENSDARG00000098574	srsf11	95	70.930	ENSMFAG00000039823	SREK1	81	71.605	Macaca_fascicularis
ENSDARG00000098574	srsf11	93	70.588	ENSMMUG00000014586	SREK1	75	70.732	Macaca_mulatta
ENSDARG00000098574	srsf11	93	70.588	ENSMNEG00000030723	SREK1	81	71.605	Macaca_nemestrina
ENSDARG00000098574	srsf11	93	70.588	ENSMLEG00000039078	SREK1	81	71.605	Mandrillus_leucophaeus
ENSDARG00000098574	srsf11	97	62.637	ENSMAMG00000003099	-	88	62.637	Mastacembelus_armatus
ENSDARG00000098574	srsf11	95	83.721	ENSMAMG00000015002	-	95	73.529	Mastacembelus_armatus
ENSDARG00000098574	srsf11	88	65.000	ENSMZEG00005005707	-	63	65.000	Maylandia_zebra
ENSDARG00000098574	srsf11	93	69.412	ENSMICG00000034959	SREK1	81	70.370	Microcebus_murinus
ENSDARG00000098574	srsf11	99	81.111	ENSMMOG00000016751	-	94	73.529	Mola_mola
ENSDARG00000098574	srsf11	93	84.706	ENSMMOG00000008877	-	83	85.714	Mola_mola
ENSDARG00000098574	srsf11	93	62.353	ENSMALG00000017086	srek1	92	62.195	Monopterus_albus
ENSDARG00000098574	srsf11	96	83.908	ENSMALG00000016608	srsf11	95	81.720	Monopterus_albus
ENSDARG00000098574	srsf11	98	80.899	MGP_CAROLIEiJ_G0025767	Srsf11	89	80.899	Mus_caroli
ENSDARG00000098574	srsf11	98	80.899	ENSMUSG00000055436	Srsf11	88	80.899	Mus_musculus
ENSDARG00000098574	srsf11	98	80.899	MGP_PahariEiJ_G0027217	Srsf11	89	80.899	Mus_pahari
ENSDARG00000098574	srsf11	98	80.899	MGP_SPRETEiJ_G0026719	Srsf11	89	80.899	Mus_spretus
ENSDARG00000098574	srsf11	95	68.605	ENSNGAG00000014631	-	65	68.605	Nannospalax_galili
ENSDARG00000098574	srsf11	97	87.500	ENSNBRG00000020213	-	93	87.500	Neolamprologus_brichardi
ENSDARG00000098574	srsf11	95	63.953	ENSNBRG00000010656	-	64	63.953	Neolamprologus_brichardi
ENSDARG00000098574	srsf11	93	70.588	ENSNLEG00000003827	SREK1	81	71.605	Nomascus_leucogenys
ENSDARG00000098574	srsf11	95	69.767	ENSODEG00000016218	-	82	67.857	Octodon_degus
ENSDARG00000098574	srsf11	96	83.908	ENSORLG00000030366	-	82	81.720	Oryzias_latipes
ENSDARG00000098574	srsf11	100	63.043	ENSORLG00000002711	-	75	63.043	Oryzias_latipes
ENSDARG00000098574	srsf11	97	82.955	ENSORLG00020009393	-	82	81.720	Oryzias_latipes_hni
ENSDARG00000098574	srsf11	93	65.882	ENSORLG00020012815	-	65	65.116	Oryzias_latipes_hni
ENSDARG00000098574	srsf11	97	82.955	ENSORLG00015009374	-	82	81.720	Oryzias_latipes_hsok
ENSDARG00000098574	srsf11	95	65.116	ENSORLG00015020455	-	68	65.116	Oryzias_latipes_hsok
ENSDARG00000098574	srsf11	95	70.930	ENSPPAG00000031605	SREK1	75	70.732	Pan_paniscus
ENSDARG00000098574	srsf11	93	69.412	ENSPPRG00000024617	SREK1	81	70.370	Panthera_pardus
ENSDARG00000098574	srsf11	93	69.412	ENSPTIG00000006608	SREK1	81	70.370	Panthera_tigris_altaica
ENSDARG00000098574	srsf11	95	70.930	ENSPTRG00000016936	SREK1	81	71.605	Pan_troglodytes
ENSDARG00000098574	srsf11	95	70.930	ENSPANG00000008953	SREK1	81	71.605	Papio_anubis
ENSDARG00000098574	srsf11	98	84.270	ENSPKIG00000021576	-	94	84.270	Paramormyrops_kingsleyae
ENSDARG00000098574	srsf11	96	80.460	ENSPMGG00000005045	-	78	80.899	Periophthalmus_magnuspinnatus
ENSDARG00000098574	srsf11	100	83.516	ENSPMGG00000000954	-	86	83.516	Periophthalmus_magnuspinnatus
ENSDARG00000098574	srsf11	92	69.048	ENSPMGG00000017029	-	73	69.048	Periophthalmus_magnuspinnatus
ENSDARG00000098574	srsf11	97	82.955	ENSPLAG00000009484	-	59	85.882	Poecilia_latipinna
ENSDARG00000098574	srsf11	91	66.265	ENSPLAG00000014609	-	61	66.265	Poecilia_latipinna
ENSDARG00000098574	srsf11	91	66.265	ENSPLAG00000008818	-	61	66.265	Poecilia_latipinna
ENSDARG00000098574	srsf11	97	86.364	ENSPMEG00000018837	srsf11	97	77.966	Poecilia_mexicana
ENSDARG00000098574	srsf11	91	66.265	ENSPMEG00000006824	-	61	66.265	Poecilia_mexicana
ENSDARG00000098574	srsf11	91	66.265	ENSPMEG00000006607	-	61	66.265	Poecilia_mexicana
ENSDARG00000098574	srsf11	97	82.955	ENSPMEG00000023453	-	59	85.882	Poecilia_mexicana
ENSDARG00000098574	srsf11	95	65.116	ENSPREG00000019922	-	69	65.116	Poecilia_reticulata
ENSDARG00000098574	srsf11	95	69.767	ENSPCOG00000026230	SREK1	81	70.370	Propithecus_coquereli
ENSDARG00000098574	srsf11	95	63.953	ENSPNYG00000007178	-	64	63.953	Pundamilia_nyererei
ENSDARG00000098574	srsf11	95	70.930	ENSRBIG00000033818	SREK1	81	71.605	Rhinopithecus_bieti
ENSDARG00000098574	srsf11	89	83.951	ENSRBIG00000042971	SRSF11	69	79.121	Rhinopithecus_bieti
ENSDARG00000098574	srsf11	93	70.588	ENSRROG00000017210	SREK1	81	71.605	Rhinopithecus_roxellana
ENSDARG00000098574	srsf11	95	70.930	ENSSBOG00000031230	SREK1	81	71.605	Saimiri_boliviensis_boliviensis
ENSDARG00000098574	srsf11	89	83.951	ENSSBOG00000033461	SRSF11	69	79.121	Saimiri_boliviensis_boliviensis
ENSDARG00000098574	srsf11	84	88.158	ENSSFOG00015016086	-	69	88.158	Scleropages_formosus
ENSDARG00000098574	srsf11	92	64.286	ENSSDUG00000010395	-	83	64.286	Seriola_dumerili
ENSDARG00000098574	srsf11	95	83.721	ENSSLDG00000012105	-	77	86.747	Seriola_lalandi_dorsalis
ENSDARG00000098574	srsf11	92	64.286	ENSSLDG00000016285	-	83	64.286	Seriola_lalandi_dorsalis
ENSDARG00000098574	srsf11	96	83.908	ENSSLDG00000015477	-	87	87.059	Seriola_lalandi_dorsalis
ENSDARG00000098574	srsf11	95	83.721	ENSSPAG00000016483	-	66	86.585	Stegastes_partitus
ENSDARG00000098574	srsf11	97	63.736	ENSSPAG00000022310	-	92	63.736	Stegastes_partitus
ENSDARG00000098574	srsf11	91	65.060	ENSTRUG00000022058	-	67	65.854	Takifugu_rubripes
ENSDARG00000098574	srsf11	89	83.951	ENSUAMG00000008403	-	69	80.220	Ursus_americanus
ENSDARG00000098574	srsf11	90	69.512	ENSUAMG00000022662	-	75	69.512	Ursus_americanus
ENSDARG00000098574	srsf11	95	69.767	ENSVVUG00000005888	-	81	70.370	Vulpes_vulpes
ENSDARG00000098574	srsf11	95	87.209	ENSXCOG00000003220	-	75	87.356	Xiphophorus_couchianus
ENSDARG00000098574	srsf11	97	83.333	ENSXCOG00000015127	-	97	83.333	Xiphophorus_couchianus
ENSDARG00000098574	srsf11	91	66.265	ENSXCOG00000017792	-	65	66.265	Xiphophorus_couchianus
ENSDARG00000098574	srsf11	91	66.265	ENSXMAG00000028210	-	68	66.265	Xiphophorus_maculatus
ENSDARG00000098574	srsf11	97	82.955	ENSXMAG00000019180	SRSF11	58	83.908	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0008380	RNA splicing	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component