EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000098613 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-15h8.16
Alias: -
Full Name: si:dkey-15h8.16
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7677 bases
Position: chr22:1953096-1960772
Accession: ZDB-GENE-050208-707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	1	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	2	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	3	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	4	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	5	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	6	7
ENSDARP00000139611	zf-C2H2	PF00096.26	6.5e-44	7	7
ENSDARP00000139611	zf-met	PF12874.7	1e-16	1	5
ENSDARP00000139611	zf-met	PF12874.7	1e-16	2	5
ENSDARP00000139611	zf-met	PF12874.7	1e-16	3	5
ENSDARP00000139611	zf-met	PF12874.7	1e-16	4	5
ENSDARP00000139611	zf-met	PF12874.7	1e-16	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000171720	-	585	-	-	- (aa)	-	-
ENSDART00000172159	-	1639	-	-	- (aa)	-	-
ENSDART00000171622	-	535	-	-	- (aa)	-	-
ENSDART00000169801	-	441	-	-	- (aa)	-	-
ENSDART00000161196	-	135	-	-	- (aa)	-	-
ENSDART00000157477	-	529	-	-	- (aa)	-	-
ENSDART00000171936	-	559	-	-	- (aa)	-	-
ENSDART00000162141	-	704	-	-	- (aa)	-	-
ENSDART00000186234	-	1636	-	ENSDARP00000147848	19 (aa)	-	A9UL44
ENSDART00000166630	-	1102	-	ENSDARP00000139611	350 (aa)	-	Q1LW42

Gene Model

Click here to download ENSDARG00000098613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098613	si:dkey-15h8.16	93	49.062	ENSDARG00000092605	znf1003	95	49.062
ENSDARG00000098613	si:dkey-15h8.16	89	59.394	ENSDARG00000088507	znf982	100	59.394
ENSDARG00000098613	si:dkey-15h8.16	89	57.787	ENSDARG00000094309	si:ch73-92e7.6	100	58.555
ENSDARG00000098613	si:dkey-15h8.16	90	55.336	ENSDARG00000111899	zgc:171435	89	55.336
ENSDARG00000098613	si:dkey-15h8.16	84	49.749	ENSDARG00000014775	zgc:113220	98	49.749
ENSDARG00000098613	si:dkey-15h8.16	89	43.946	ENSDARG00000078281	zgc:173575	99	46.154
ENSDARG00000098613	si:dkey-15h8.16	90	56.287	ENSDARG00000071833	znf1162	100	67.105
ENSDARG00000098613	si:dkey-15h8.16	98	62.437	ENSDARG00000094343	si:dkey-20i20.8	85	67.614
ENSDARG00000098613	si:dkey-15h8.16	90	69.036	ENSDARG00000071725	znf1167	99	69.036
ENSDARG00000098613	si:dkey-15h8.16	90	53.968	ENSDARG00000103954	znf1152	98	53.968
ENSDARG00000098613	si:dkey-15h8.16	98	49.533	ENSDARG00000111614	znf1183	100	47.293
ENSDARG00000098613	si:dkey-15h8.16	75	47.253	ENSDARG00000115737	AL954741.2	91	47.253
ENSDARG00000098613	si:dkey-15h8.16	88	53.571	ENSDARG00000104065	znf1154	97	52.903
ENSDARG00000098613	si:dkey-15h8.16	90	52.244	ENSDARG00000093378	si:ch211-235i11.5	99	52.885
ENSDARG00000098613	si:dkey-15h8.16	93	58.873	ENSDARG00000101694	znf1184	99	56.818
ENSDARG00000098613	si:dkey-15h8.16	79	49.615	ENSDARG00000106808	CU856622.1	100	49.615
ENSDARG00000098613	si:dkey-15h8.16	72	50.199	ENSDARG00000105075	BX324216.2	78	49.225
ENSDARG00000098613	si:dkey-15h8.16	97	52.448	ENSDARG00000099618	si:dkey-1b17.6	100	53.481
ENSDARG00000098613	si:dkey-15h8.16	90	50.292	ENSDARG00000071714	znf983	98	63.542
ENSDARG00000098613	si:dkey-15h8.16	98	70.053	ENSDARG00000102053	znf1164	100	73.950
ENSDARG00000098613	si:dkey-15h8.16	98	63.768	ENSDARG00000093562	si:dkey-20i20.7	98	63.768
ENSDARG00000098613	si:dkey-15h8.16	89	48.485	ENSDARG00000111506	BX470259.1	98	48.485
ENSDARG00000098613	si:dkey-15h8.16	93	59.028	ENSDARG00000100882	znf1154	93	51.852
ENSDARG00000098613	si:dkey-15h8.16	89	49.107	ENSDARG00000094736	znf1157	100	70.175
ENSDARG00000098613	si:dkey-15h8.16	78	52.201	ENSDARG00000077712	zgc:113886	98	58.696
ENSDARG00000098613	si:dkey-15h8.16	91	44.688	ENSDARG00000109703	FO834825.1	100	45.714
ENSDARG00000098613	si:dkey-15h8.16	98	57.343	ENSDARG00000112141	znf1169	94	56.993
ENSDARG00000098613	si:dkey-15h8.16	99	52.646	ENSDARG00000071790	znf1153	99	52.312
ENSDARG00000098613	si:dkey-15h8.16	86	46.519	ENSDARG00000095704	si:dkey-4c15.13	97	69.231
ENSDARG00000098613	si:dkey-15h8.16	93	59.036	ENSDARG00000115326	znf1002	94	61.372
ENSDARG00000098613	si:dkey-15h8.16	90	50.000	ENSDARG00000053165	zgc:113377	100	50.000
ENSDARG00000098613	si:dkey-15h8.16	90	46.541	ENSDARG00000078159	zgc:175284	100	52.362
ENSDARG00000098613	si:dkey-15h8.16	96	66.495	ENSDARG00000101425	si:dkey-1b17.5	91	66.854
ENSDARG00000098613	si:dkey-15h8.16	77	54.661	ENSDARG00000069869	zgc:113030	99	54.661
ENSDARG00000098613	si:dkey-15h8.16	74	43.919	ENSDARG00000116814	CU570894.2	99	43.919
ENSDARG00000098613	si:dkey-15h8.16	95	60.260	ENSDARG00000102678	znf1181	92	54.737
ENSDARG00000098613	si:dkey-15h8.16	90	51.242	ENSDARG00000100587	zgc:113886	99	52.830
ENSDARG00000098613	si:dkey-15h8.16	79	46.565	ENSDARG00000098898	si:ch211-255f4.2	99	61.111
ENSDARG00000098613	si:dkey-15h8.16	85	50.259	ENSDARG00000073821	znf1177	88	48.175
ENSDARG00000098613	si:dkey-15h8.16	89	46.945	ENSDARG00000089947	BX005085.1	99	47.588
ENSDARG00000098613	si:dkey-15h8.16	98	56.707	ENSDARG00000100361	znf1174	99	57.349
ENSDARG00000098613	si:dkey-15h8.16	75	57.692	ENSDARG00000100915	si:ch211-255f4.7	99	57.692
ENSDARG00000098613	si:dkey-15h8.16	93	50.781	ENSDARG00000098021	si:dkey-111k8.2	100	47.115
ENSDARG00000098613	si:dkey-15h8.16	97	61.039	ENSDARG00000100544	zgc:173486	99	62.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098613	si:dkey-15h8.16	79	46.358	ENSACIG00000008886	znf1164	80	46.358	Amphilophus_citrinellus
ENSDARG00000098613	si:dkey-15h8.16	90	42.657	ENSATEG00000008683	si:ch211-241b2.1	91	42.361	Anabas_testudineus
ENSDARG00000098613	si:dkey-15h8.16	90	41.525	ENSATEG00000008667	-	79	41.525	Anabas_testudineus
ENSDARG00000098613	si:dkey-15h8.16	90	42.804	ENSACLG00000024670	-	88	42.804	Astatotilapia_calliptera
ENSDARG00000098613	si:dkey-15h8.16	78	44.118	ENSEBUG00000015073	-	95	43.561	Eptatretus_burgeri
ENSDARG00000098613	si:dkey-15h8.16	74	49.515	ENSLBEG00000020461	-	50	49.515	Labrus_bergylta
ENSDARG00000098613	si:dkey-15h8.16	89	47.982	ENSMZEG00005027943	-	77	46.667	Maylandia_zebra
ENSDARG00000098613	si:dkey-15h8.16	77	40.952	ENSMZEG00005005162	-	67	40.952	Maylandia_zebra
ENSDARG00000098613	si:dkey-15h8.16	75	41.872	ENSONIG00000003363	-	100	40.079	Oreochromis_niloticus
ENSDARG00000098613	si:dkey-15h8.16	77	46.429	ENSONIG00000006585	-	96	45.882	Oreochromis_niloticus
ENSDARG00000098613	si:dkey-15h8.16	77	41.667	ENSONIG00000013908	-	100	42.529	Oreochromis_niloticus
ENSDARG00000098613	si:dkey-15h8.16	87	43.243	ENSPMGG00000001558	znf1174	79	43.243	Periophthalmus_magnuspinnatus
ENSDARG00000098613	si:dkey-15h8.16	85	42.718	ENSPMEG00000007573	zgc:113343	71	42.718	Poecilia_mexicana
ENSDARG00000098613	si:dkey-15h8.16	74	47.431	ENSPREG00000001514	zgc:113343	63	47.431	Poecilia_reticulata
ENSDARG00000098613	si:dkey-15h8.16	87	42.857	ENSXCOG00000017871	zgc:113343	67	46.182	Xiphophorus_couchianus
ENSDARG00000098613	si:dkey-15h8.16	84	44.407	ENSXMAG00000019923	zgc:113343	68	44.407	Xiphophorus_maculatus