EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000098779 (Gene tree)
Gene ID: -
Gene Symbol: BX547930.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4302 bases
Position: chr20:12830448-12834749
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000132612	RVT_1	PF00078.27	1.5e-47	1	1
ENSDARP00000132612	Exo_endo_phos	PF03372.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164754	BX547930.4-201	4302	-	ENSDARP00000132612	1307 (aa)	-	A0A0G2KJV6

Gene Model

Click here to download ENSDARG00000098779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098779	BX547930.4	99	49.581	ENSDARG00000101795	CABZ01033394.1	98	49.691
ENSDARG00000098779	BX547930.4	99	39.620	ENSDARG00000100303	CU638714.1	98	39.692
ENSDARG00000098779	BX547930.4	99	48.702	ENSDARG00000105157	BX649434.3	97	48.958

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098779	BX547930.4	99	49.195	ENSATEG00000021554	-	98	49.418	Anabas_testudineus
ENSDARG00000098779	BX547930.4	80	41.659	ENSAMXG00000037575	-	97	41.849	Astyanax_mexicanus
ENSDARG00000098779	BX547930.4	96	47.211	ENSGMOG00000001470	-	98	47.526	Gadus_morhua
ENSDARG00000098779	BX547930.4	99	48.439	ENSGACG00000000122	-	97	48.726	Gasterosteus_aculeatus
ENSDARG00000098779	BX547930.4	67	51.129	ENSKMAG00000017599	-	97	51.568	Kryptolebias_marmoratus
ENSDARG00000098779	BX547930.4	87	47.249	ENSLBEG00000029018	-	99	47.249	Labrus_bergylta
ENSDARG00000098779	BX547930.4	78	43.052	ENSLBEG00000008569	-	97	43.270	Labrus_bergylta
ENSDARG00000098779	BX547930.4	99	40.435	ENSLBEG00000007968	-	97	40.738	Labrus_bergylta
ENSDARG00000098779	BX547930.4	58	43.320	ENSLBEG00000022930	-	93	43.467	Labrus_bergylta
ENSDARG00000098779	BX547930.4	99	40.435	ENSLBEG00000008483	-	97	40.738	Labrus_bergylta
ENSDARG00000098779	BX547930.4	99	40.435	ENSLBEG00000012182	-	97	40.738	Labrus_bergylta
ENSDARG00000098779	BX547930.4	99	40.285	ENSLBEG00000007872	-	97	40.661	Labrus_bergylta
ENSDARG00000098779	BX547930.4	75	48.182	ENSLBEG00000008622	-	99	48.231	Labrus_bergylta
ENSDARG00000098779	BX547930.4	84	48.205	ENSORLG00000024114	-	99	48.378	Oryzias_latipes
ENSDARG00000098779	BX547930.4	98	41.249	ENSORLG00000024845	-	98	41.249	Oryzias_latipes
ENSDARG00000098779	BX547930.4	98	41.109	ENSORLG00020022348	-	98	41.109	Oryzias_latipes_hni
ENSDARG00000098779	BX547930.4	99	38.799	ENSOMEG00000013951	-	97	38.988	Oryzias_melastigma
ENSDARG00000098779	BX547930.4	99	47.517	ENSSDUG00000006191	-	98	47.873	Seriola_dumerili
ENSDARG00000098779	BX547930.4	97	53.888	ENSXMAG00000028372	-	98	53.986	Xiphophorus_maculatus
ENSDARG00000098779	BX547930.4	99	47.041	ENSXMAG00000024932	-	98	47.100	Xiphophorus_maculatus
ENSDARG00000098779	BX547930.4	99	47.041	ENSXMAG00000025449	-	98	47.100	Xiphophorus_maculatus
ENSDARG00000098779	BX547930.4	98	47.145	ENSXMAG00000028545	-	99	47.523	Xiphophorus_maculatus