EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098801 (Gene tree)
Gene ID: 100330841
Gene Symbol: sbno2a
Alias: sb:eu274
Full Name: strawberry notch homolog 2a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 73340 bases
Position: chr2:56811549-56884888
Accession: ZDB-GENE-100629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131480	ResIII	PF04851.15	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159719	-	4440	-	ENSDARP00000131480	1350 (aa)	-	A0A0G2KGP5

Gene Model

Click here to download ENSDARG00000098801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098801	sbno2a	68	65.688	ENSDARG00000099080	sbno1	71	65.688
ENSDARG00000098801	sbno2a	99	66.498	ENSDARG00000016188	SBNO2	90	69.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098801	sbno2a	90	62.758	ENSG00000064932	SBNO2	90	63.352	Homo_sapiens
ENSDARG00000098801	sbno2a	92	77.147	ENSAPOG00000003185	si:ch73-63e15.2	95	72.022	Acanthochromis_polyacanthus
ENSDARG00000098801	sbno2a	94	76.561	ENSAOCG00000016581	si:ch73-63e15.2	98	74.450	Amphiprion_ocellaris
ENSDARG00000098801	sbno2a	94	76.638	ENSAPEG00000008862	si:ch73-63e15.2	77	80.138	Amphiprion_percula
ENSDARG00000098801	sbno2a	97	74.606	ENSATEG00000023838	si:ch73-63e15.2	99	76.112	Anabas_testudineus
ENSDARG00000098801	sbno2a	88	67.317	ENSAPLG00000007158	SBNO2	93	67.760	Anas_platyrhynchos
ENSDARG00000098801	sbno2a	90	63.475	ENSANAG00000026685	SBNO2	94	61.705	Aotus_nancymaae
ENSDARG00000098801	sbno2a	94	74.519	ENSACLG00000005090	si:ch73-63e15.2	81	74.134	Astatotilapia_calliptera
ENSDARG00000098801	sbno2a	99	79.326	ENSAMXG00000018868	sbno2a	99	80.788	Astyanax_mexicanus
ENSDARG00000098801	sbno2a	96	71.700	ENSAMXG00000015881	si:ch73-63e15.2	88	73.745	Astyanax_mexicanus
ENSDARG00000098801	sbno2a	96	60.886	ENSBTAG00000020780	SBNO2	90	64.151	Bos_taurus
ENSDARG00000098801	sbno2a	90	62.839	ENSCAFG00000019543	SBNO2	90	62.440	Canis_familiaris
ENSDARG00000098801	sbno2a	90	62.839	ENSCAFG00020017115	SBNO2	96	62.440	Canis_lupus_dingo
ENSDARG00000098801	sbno2a	89	63.835	ENSCHIG00000026127	SBNO2	86	63.511	Capra_hircus
ENSDARG00000098801	sbno2a	88	62.694	ENSCAPG00000005731	SBNO2	99	62.531	Cavia_aperea
ENSDARG00000098801	sbno2a	89	62.612	ENSCPOG00000007477	SBNO2	91	62.409	Cavia_porcellus
ENSDARG00000098801	sbno2a	90	63.213	ENSCCAG00000037518	SBNO2	91	63.082	Cebus_capucinus
ENSDARG00000098801	sbno2a	90	62.866	ENSCATG00000037046	SBNO2	90	63.352	Cercocebus_atys
ENSDARG00000098801	sbno2a	83	67.254	ENSCLAG00000010178	SBNO2	98	67.077	Chinchilla_lanigera
ENSDARG00000098801	sbno2a	90	62.708	ENSCSAG00000012317	SBNO2	90	63.272	Chlorocebus_sabaeus
ENSDARG00000098801	sbno2a	88	65.407	ENSCPBG00000008920	SBNO2	96	64.914	Chrysemys_picta_bellii
ENSDARG00000098801	sbno2a	86	62.582	ENSCANG00000036745	SBNO2	98	63.154	Colobus_angolensis_palliatus
ENSDARG00000098801	sbno2a	83	65.538	ENSCGRG00001023960	Sbno2	91	61.920	Cricetulus_griseus_chok1gshd
ENSDARG00000098801	sbno2a	83	66.753	ENSCGRG00000011984	Sbno2	91	63.040	Cricetulus_griseus_crigri
ENSDARG00000098801	sbno2a	86	75.085	ENSCSEG00000006856	si:ch73-63e15.2	94	80.718	Cynoglossus_semilaevis
ENSDARG00000098801	sbno2a	94	72.630	ENSCVAG00000005663	si:ch73-63e15.2	81	75.082	Cyprinodon_variegatus
ENSDARG00000098801	sbno2a	84	67.156	ENSDORG00000002916	Sbno2	88	64.592	Dipodomys_ordii
ENSDARG00000098801	sbno2a	90	63.709	ENSEASG00005021621	SBNO2	91	64.841	Equus_asinus_asinus
ENSDARG00000098801	sbno2a	90	63.789	ENSECAG00000011827	SBNO2	91	65.004	Equus_caballus
ENSDARG00000098801	sbno2a	99	72.963	ENSELUG00000020457	si:ch73-63e15.2	90	73.154	Esox_lucius
ENSDARG00000098801	sbno2a	93	64.877	ENSFALG00000013988	SBNO2	92	64.846	Ficedula_albicollis
ENSDARG00000098801	sbno2a	83	64.485	ENSFDAG00000015186	SBNO2	92	61.893	Fukomys_damarensis
ENSDARG00000098801	sbno2a	94	74.003	ENSFHEG00000022262	si:ch73-63e15.2	78	77.460	Fundulus_heteroclitus
ENSDARG00000098801	sbno2a	86	78.130	ENSGMOG00000007542	si:ch73-63e15.2	98	77.787	Gadus_morhua
ENSDARG00000098801	sbno2a	94	64.555	ENSGALG00000037522	SBNO2	90	64.599	Gallus_gallus
ENSDARG00000098801	sbno2a	91	75.556	ENSGAFG00000004860	si:ch73-63e15.2	91	78.435	Gambusia_affinis
ENSDARG00000098801	sbno2a	84	78.806	ENSGACG00000013190	si:ch73-63e15.2	95	78.028	Gasterosteus_aculeatus
ENSDARG00000098801	sbno2a	94	64.943	ENSGAGG00000008348	SBNO2	91	67.664	Gopherus_agassizii
ENSDARG00000098801	sbno2a	94	74.345	ENSHBUG00000010742	si:ch73-63e15.2	79	76.783	Haplochromis_burtoni
ENSDARG00000098801	sbno2a	84	66.609	ENSHGLG00000008739	SBNO2	91	62.421	Heterocephalus_glaber_female
ENSDARG00000098801	sbno2a	83	67.075	ENSHGLG00100005269	SBNO2	98	66.900	Heterocephalus_glaber_male
ENSDARG00000098801	sbno2a	97	71.118	ENSHCOG00000000884	si:ch73-63e15.2	99	71.118	Hippocampus_comes
ENSDARG00000098801	sbno2a	91	72.887	ENSIPUG00000000537	si:ch73-63e15.2	86	75.595	Ictalurus_punctatus
ENSDARG00000098801	sbno2a	99	80.147	ENSIPUG00000019672	sbno2	99	81.765	Ictalurus_punctatus
ENSDARG00000098801	sbno2a	80	67.575	ENSSTOG00000025832	SBNO2	95	60.752	Ictidomys_tridecemlineatus
ENSDARG00000098801	sbno2a	75	68.015	ENSJJAG00000017397	Sbno2	80	64.937	Jaculus_jaculus
ENSDARG00000098801	sbno2a	91	75.080	ENSKMAG00000005541	si:ch73-63e15.2	78	77.425	Kryptolebias_marmoratus
ENSDARG00000098801	sbno2a	87	78.290	ENSLBEG00000025016	si:ch73-63e15.2	96	78.342	Labrus_bergylta
ENSDARG00000098801	sbno2a	98	74.707	ENSLOCG00000004643	si:ch73-63e15.2	92	75.650	Lepisosteus_oculatus
ENSDARG00000098801	sbno2a	76	66.763	ENSLAFG00000008824	SBNO2	86	63.961	Loxodonta_africana
ENSDARG00000098801	sbno2a	90	61.709	ENSMFAG00000040030	SBNO2	92	62.420	Macaca_fascicularis
ENSDARG00000098801	sbno2a	90	62.866	ENSMMUG00000010886	SBNO2	90	63.352	Macaca_mulatta
ENSDARG00000098801	sbno2a	90	62.945	ENSMNEG00000039927	SBNO2	94	61.082	Macaca_nemestrina
ENSDARG00000098801	sbno2a	83	63.319	ENSMLEG00000038556	SBNO2	98	63.918	Mandrillus_leucophaeus
ENSDARG00000098801	sbno2a	97	73.708	ENSMAMG00000018758	si:ch73-63e15.2	80	76.245	Mastacembelus_armatus
ENSDARG00000098801	sbno2a	94	74.499	ENSMZEG00005010682	si:ch73-63e15.2	81	74.114	Maylandia_zebra
ENSDARG00000098801	sbno2a	91	64.914	ENSMGAG00000003801	SBNO2	94	65.063	Meleagris_gallopavo
ENSDARG00000098801	sbno2a	88	64.122	ENSMAUG00000008034	Sbno2	88	64.444	Mesocricetus_auratus
ENSDARG00000098801	sbno2a	92	61.931	ENSMICG00000013071	SBNO2	91	64.548	Microcebus_murinus
ENSDARG00000098801	sbno2a	88	63.905	ENSMOCG00000010504	Sbno2	88	64.239	Microtus_ochrogaster
ENSDARG00000098801	sbno2a	89	66.340	ENSMODG00000005382	SBNO2	85	66.013	Monodelphis_domestica
ENSDARG00000098801	sbno2a	69	73.853	ENSMALG00000021831	si:ch73-63e15.2	96	73.853	Monopterus_albus
ENSDARG00000098801	sbno2a	94	60.643	ENSMUSG00000035673	Sbno2	97	63.941	Mus_musculus
ENSDARG00000098801	sbno2a	89	62.939	MGP_PahariEiJ_G0030976	Sbno2	89	63.941	Mus_pahari
ENSDARG00000098801	sbno2a	94	60.460	MGP_SPRETEiJ_G0016381	Sbno2	95	63.778	Mus_spretus
ENSDARG00000098801	sbno2a	77	65.856	ENSMPUG00000008747	SBNO2	96	65.575	Mustela_putorius_furo
ENSDARG00000098801	sbno2a	89	62.764	ENSNGAG00000004308	Sbno2	92	61.772	Nannospalax_galili
ENSDARG00000098801	sbno2a	81	78.442	ENSNBRG00000022968	si:ch73-63e15.2	93	84.375	Neolamprologus_brichardi
ENSDARG00000098801	sbno2a	84	66.746	ENSNLEG00000001305	SBNO2	89	61.199	Nomascus_leucogenys
ENSDARG00000098801	sbno2a	69	66.561	ENSMEUG00000013511	-	78	66.348	Notamacropus_eugenii
ENSDARG00000098801	sbno2a	75	70.769	ENSOPRG00000017238	SBNO2	89	68.905	Ochotona_princeps
ENSDARG00000098801	sbno2a	88	63.051	ENSODEG00000011822	SBNO2	93	61.721	Octodon_degus
ENSDARG00000098801	sbno2a	94	74.827	ENSONIG00000002490	si:ch73-63e15.2	100	74.882	Oreochromis_niloticus
ENSDARG00000098801	sbno2a	93	74.306	ENSORLG00000000913	si:ch73-63e15.2	81	74.941	Oryzias_latipes
ENSDARG00000098801	sbno2a	92	75.195	ENSORLG00020010978	si:ch73-63e15.2	79	77.452	Oryzias_latipes_hni
ENSDARG00000098801	sbno2a	92	75.351	ENSORLG00015000202	si:ch73-63e15.2	79	77.536	Oryzias_latipes_hsok
ENSDARG00000098801	sbno2a	94	74.387	ENSOMEG00000000359	si:ch73-63e15.2	82	73.926	Oryzias_melastigma
ENSDARG00000098801	sbno2a	84	64.131	ENSOARG00000011130	SBNO2	86	63.786	Ovis_aries
ENSDARG00000098801	sbno2a	90	61.950	ENSPPAG00000032482	SBNO2	92	62.689	Pan_paniscus
ENSDARG00000098801	sbno2a	75	70.809	ENSPTRG00000010185	SBNO2	91	63.864	Pan_troglodytes
ENSDARG00000098801	sbno2a	90	59.699	ENSPANG00000009658	SBNO2	90	60.144	Papio_anubis
ENSDARG00000098801	sbno2a	78	76.026	ENSPKIG00000009707	-	87	75.802	Paramormyrops_kingsleyae
ENSDARG00000098801	sbno2a	95	74.367	ENSPKIG00000024201	si:ch73-63e15.2	87	77.269	Paramormyrops_kingsleyae
ENSDARG00000098801	sbno2a	71	70.191	ENSPSIG00000002852	SBNO2	100	69.587	Pelodiscus_sinensis
ENSDARG00000098801	sbno2a	95	71.729	ENSPMGG00000014375	si:ch73-63e15.2	95	71.495	Periophthalmus_magnuspinnatus
ENSDARG00000098801	sbno2a	84	64.757	ENSPEMG00000024122	Sbno2	88	62.286	Peromyscus_maniculatus_bairdii
ENSDARG00000098801	sbno2a	93	64.458	ENSPCIG00000011264	SBNO2	88	64.692	Phascolarctos_cinereus
ENSDARG00000098801	sbno2a	91	75.556	ENSPFOG00000004096	si:ch73-63e15.2	100	77.405	Poecilia_formosa
ENSDARG00000098801	sbno2a	86	78.596	ENSPLAG00000014653	si:ch73-63e15.2	77	78.522	Poecilia_latipinna
ENSDARG00000098801	sbno2a	91	75.635	ENSPMEG00000002129	si:ch73-63e15.2	96	75.411	Poecilia_mexicana
ENSDARG00000098801	sbno2a	91	75.616	ENSPREG00000006755	si:ch73-63e15.2	79	75.298	Poecilia_reticulata
ENSDARG00000098801	sbno2a	82	65.009	ENSPCAG00000012256	SBNO2	80	65.737	Procavia_capensis
ENSDARG00000098801	sbno2a	90	56.984	ENSPCOG00000015216	SBNO2	94	55.606	Propithecus_coquereli
ENSDARG00000098801	sbno2a	94	74.499	ENSPNYG00000019926	si:ch73-63e15.2	80	76.866	Pundamilia_nyererei
ENSDARG00000098801	sbno2a	99	80.176	ENSPNAG00000026609	sbno2a	99	75.167	Pygocentrus_nattereri
ENSDARG00000098801	sbno2a	96	71.991	ENSPNAG00000020260	si:ch73-63e15.2	91	72.514	Pygocentrus_nattereri
ENSDARG00000098801	sbno2a	89	63.429	ENSRNOG00000013987	Sbno2	92	63.629	Rattus_norvegicus
ENSDARG00000098801	sbno2a	82	63.869	ENSRBIG00000009740	SBNO2	85	67.015	Rhinopithecus_bieti
ENSDARG00000098801	sbno2a	80	65.618	ENSRROG00000044671	SBNO2	89	70.421	Rhinopithecus_roxellana
ENSDARG00000098801	sbno2a	90	63.373	ENSSBOG00000023562	SBNO2	91	63.242	Saimiri_boliviensis_boliviensis
ENSDARG00000098801	sbno2a	81	69.929	ENSSHAG00000010241	SBNO2	96	69.558	Sarcophilus_harrisii
ENSDARG00000098801	sbno2a	84	78.665	ENSSFOG00015005861	si:ch73-63e15.2	99	76.092	Scleropages_formosus
ENSDARG00000098801	sbno2a	92	75.943	ENSSMAG00000012489	si:ch73-63e15.2	78	75.743	Scophthalmus_maximus
ENSDARG00000098801	sbno2a	92	76.803	ENSSDUG00000003527	si:ch73-63e15.2	75	79.074	Seriola_dumerili
ENSDARG00000098801	sbno2a	93	76.365	ENSSLDG00000004623	si:ch73-63e15.2	78	75.975	Seriola_lalandi_dorsalis
ENSDARG00000098801	sbno2a	87	78.499	ENSSPAG00000017717	si:ch73-63e15.2	77	78.078	Stegastes_partitus
ENSDARG00000098801	sbno2a	95	61.178	ENSSSCG00000030042	SBNO2	90	63.905	Sus_scrofa
ENSDARG00000098801	sbno2a	81	79.476	ENSTRUG00000018193	si:ch73-63e15.2	86	79.204	Takifugu_rubripes
ENSDARG00000098801	sbno2a	83	63.417	ENSUAMG00000006568	SBNO2	93	70.751	Ursus_americanus
ENSDARG00000098801	sbno2a	90	62.969	ENSVVUG00000022823	SBNO2	89	62.570	Vulpes_vulpes
ENSDARG00000098801	sbno2a	76	74.597	ENSXETG00000021579	sbno2	90	74.597	Xenopus_tropicalis
ENSDARG00000098801	sbno2a	74	78.413	ENSXCOG00000009209	si:ch73-63e15.2	84	85.921	Xiphophorus_couchianus
ENSDARG00000098801	sbno2a	93	74.708	ENSXMAG00000012091	si:ch73-63e15.2	84	82.281	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0048854	brain morphogenesis	21937870.	IMP	Process
GO:0050727	regulation of inflammatory response	-	IEA	Process