EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098825 (Gene tree)
Gene ID: 692329
Gene Symbol: farsa
Alias: farsla|wu:fj21a11|zgc:136506|zgc:158185
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 21629 bases
Position: chr3:13879446-13901074
Accession: ZDB-GENE-050512-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000132548	tRNA-synt_2d	PF01409.20	3.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164767	-	1884	-	ENSDARP00000132548	497 (aa)	-	Q1JPX3

Gene Model

Click here to download ENSDARG00000098825's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098825	farsa	100	77.867	ENSG00000179115	FARSA	99	79.940	Homo_sapiens
ENSDARG00000098825	farsa	100	88.330	ENSAPOG00000011465	farsa	100	88.330	Acanthochromis_polyacanthus
ENSDARG00000098825	farsa	100	77.062	ENSAMEG00000012446	FARSA	98	77.062	Ailuropoda_melanoleuca
ENSDARG00000098825	farsa	100	85.111	ENSACIG00000020499	farsa	100	85.111	Amphilophus_citrinellus
ENSDARG00000098825	farsa	100	88.129	ENSAOCG00000000581	farsa	100	88.129	Amphiprion_ocellaris
ENSDARG00000098825	farsa	100	87.928	ENSAPEG00000017695	farsa	100	87.928	Amphiprion_percula
ENSDARG00000098825	farsa	100	79.074	ENSATEG00000012807	farsa	100	79.074	Anabas_testudineus
ENSDARG00000098825	farsa	100	74.297	ENSATEG00000012633	farsa	100	74.297	Anabas_testudineus
ENSDARG00000098825	farsa	99	78.543	ENSACAG00000017166	FARSA	83	78.543	Anolis_carolinensis
ENSDARG00000098825	farsa	100	77.666	ENSANAG00000037420	FARSA	98	77.666	Aotus_nancymaae
ENSDARG00000098825	farsa	100	90.744	ENSACLG00000001716	farsa	100	90.744	Astatotilapia_calliptera
ENSDARG00000098825	farsa	100	91.348	ENSAMXG00000037912	farsa	100	91.348	Astyanax_mexicanus
ENSDARG00000098825	farsa	100	76.258	ENSBTAG00000021374	FARSA	98	76.258	Bos_taurus
ENSDARG00000098825	farsa	94	63.011	WBGene00001497	fars-1	92	63.011	Caenorhabditis_elegans
ENSDARG00000098825	farsa	99	77.016	ENSCJAG00000004686	FARSA	98	73.038	Callithrix_jacchus
ENSDARG00000098825	farsa	100	77.264	ENSCAFG00000017096	FARSA	98	77.264	Canis_familiaris
ENSDARG00000098825	farsa	100	77.264	ENSCAFG00020005315	FARSA	98	77.264	Canis_lupus_dingo
ENSDARG00000098825	farsa	100	71.315	ENSCHIG00000022617	FARSA	98	71.315	Capra_hircus
ENSDARG00000098825	farsa	92	74.236	ENSTSYG00000002595	FARSA	83	74.236	Carlito_syrichta
ENSDARG00000098825	farsa	90	77.679	ENSCAPG00000011353	FARSA	95	77.679	Cavia_aperea
ENSDARG00000098825	farsa	100	76.258	ENSCPOG00000000787	FARSA	98	76.258	Cavia_porcellus
ENSDARG00000098825	farsa	100	77.264	ENSCCAG00000028176	FARSA	98	77.264	Cebus_capucinus
ENSDARG00000098825	farsa	99	76.008	ENSCLAG00000015489	FARSA	98	76.008	Chinchilla_lanigera
ENSDARG00000098825	farsa	94	79.399	ENSCSAG00000006530	FARSA	98	79.399	Chlorocebus_sabaeus
ENSDARG00000098825	farsa	96	81.628	ENSCPBG00000023915	FARSA	99	80.000	Chrysemys_picta_bellii
ENSDARG00000098825	farsa	99	65.795	ENSCING00000002567	-	99	65.795	Ciona_intestinalis
ENSDARG00000098825	farsa	99	67.404	ENSCSAVG00000010683	-	98	67.404	Ciona_savignyi
ENSDARG00000098825	farsa	100	77.666	ENSCANG00000043649	-	98	77.666	Colobus_angolensis_palliatus
ENSDARG00000098825	farsa	100	77.465	ENSCGRG00001019769	Farsa	98	77.465	Cricetulus_griseus_chok1gshd
ENSDARG00000098825	farsa	100	77.465	ENSCGRG00000013415	Farsa	98	77.465	Cricetulus_griseus_crigri
ENSDARG00000098825	farsa	100	86.922	ENSCSEG00000016214	farsa	96	86.922	Cynoglossus_semilaevis
ENSDARG00000098825	farsa	100	87.525	ENSCVAG00000007907	farsa	100	87.525	Cyprinodon_variegatus
ENSDARG00000098825	farsa	96	77.311	ENSDNOG00000032350	FARSA	98	77.311	Dasypus_novemcinctus
ENSDARG00000098825	farsa	99	77.016	ENSDORG00000010118	Farsa	98	77.016	Dipodomys_ordii
ENSDARG00000098825	farsa	99	66.599	FBgn0030007	alpha-PheRS	99	66.599	Drosophila_melanogaster
ENSDARG00000098825	farsa	100	69.215	ENSETEG00000018673	FARSA	98	69.215	Echinops_telfairi
ENSDARG00000098825	farsa	60	70.608	ENSEBUG00000008545	farsa	99	70.608	Eptatretus_burgeri
ENSDARG00000098825	farsa	93	65.660	ENSEASG00005004093	FARSA	95	65.660	Equus_asinus_asinus
ENSDARG00000098825	farsa	100	76.459	ENSECAG00000015139	FARSA	93	76.459	Equus_caballus
ENSDARG00000098825	farsa	100	90.342	ENSELUG00000010183	farsa	100	90.342	Esox_lucius
ENSDARG00000098825	farsa	100	77.062	ENSFCAG00000023511	FARSA	98	77.062	Felis_catus
ENSDARG00000098825	farsa	99	76.008	ENSFDAG00000005987	FARSA	98	76.008	Fukomys_damarensis
ENSDARG00000098825	farsa	100	89.738	ENSFHEG00000009382	farsa	94	89.738	Fundulus_heteroclitus
ENSDARG00000098825	farsa	100	84.538	ENSGMOG00000018319	farsa	100	84.538	Gadus_morhua
ENSDARG00000098825	farsa	99	72.470	ENSGALG00000040258	FARSA	87	72.470	Gallus_gallus
ENSDARG00000098825	farsa	100	89.135	ENSGAFG00000014146	farsa	100	89.135	Gambusia_affinis
ENSDARG00000098825	farsa	100	88.353	ENSGACG00000006278	farsa	100	88.353	Gasterosteus_aculeatus
ENSDARG00000098825	farsa	100	80.600	ENSGAGG00000000753	FARSA	99	80.600	Gopherus_agassizii
ENSDARG00000098825	farsa	100	77.666	ENSGGOG00000003418	FARSA	98	77.666	Gorilla_gorilla
ENSDARG00000098825	farsa	100	90.744	ENSHBUG00000019852	farsa	100	90.744	Haplochromis_burtoni
ENSDARG00000098825	farsa	99	75.605	ENSHGLG00000005213	FARSA	98	75.605	Heterocephalus_glaber_female
ENSDARG00000098825	farsa	99	75.806	ENSHGLG00100009586	FARSA	98	75.806	Heterocephalus_glaber_male
ENSDARG00000098825	farsa	100	87.525	ENSHCOG00000019548	farsa	100	87.525	Hippocampus_comes
ENSDARG00000098825	farsa	100	91.952	ENSIPUG00000007635	farsa	100	91.952	Ictalurus_punctatus
ENSDARG00000098825	farsa	100	76.459	ENSSTOG00000008748	FARSA	98	76.459	Ictidomys_tridecemlineatus
ENSDARG00000098825	farsa	100	86.922	ENSKMAG00000010698	farsa	100	86.922	Kryptolebias_marmoratus
ENSDARG00000098825	farsa	86	85.882	ENSLBEG00000001258	farsa	97	85.882	Labrus_bergylta
ENSDARG00000098825	farsa	100	87.726	ENSLBEG00000006757	-	100	87.726	Labrus_bergylta
ENSDARG00000098825	farsa	93	87.041	ENSLOCG00000008389	farsa	96	87.041	Lepisosteus_oculatus
ENSDARG00000098825	farsa	100	76.660	ENSLAFG00000016154	FARSA	98	76.660	Loxodonta_africana
ENSDARG00000098825	farsa	100	77.666	ENSMFAG00000030595	FARSA	98	77.666	Macaca_fascicularis
ENSDARG00000098825	farsa	100	77.666	ENSMMUG00000004390	FARSA	98	77.666	Macaca_mulatta
ENSDARG00000098825	farsa	100	77.666	ENSMNEG00000043866	FARSA	98	77.666	Macaca_nemestrina
ENSDARG00000098825	farsa	100	77.711	ENSMLEG00000029157	FARSA	98	77.711	Mandrillus_leucophaeus
ENSDARG00000098825	farsa	100	88.732	ENSMAMG00000010636	farsa	100	88.732	Mastacembelus_armatus
ENSDARG00000098825	farsa	100	90.744	ENSMZEG00005002319	farsa	100	90.744	Maylandia_zebra
ENSDARG00000098825	farsa	100	77.666	ENSMAUG00000009188	Farsa	98	77.666	Mesocricetus_auratus
ENSDARG00000098825	farsa	100	77.062	ENSMICG00000016272	FARSA	98	77.062	Microcebus_murinus
ENSDARG00000098825	farsa	99	77.621	ENSMOCG00000011399	Farsa	98	77.621	Microtus_ochrogaster
ENSDARG00000098825	farsa	100	82.897	ENSMMOG00000006287	farsa	100	82.897	Mola_mola
ENSDARG00000098825	farsa	99	78.226	ENSMODG00000011519	FARSA	100	78.226	Monodelphis_domestica
ENSDARG00000098825	farsa	100	84.708	ENSMALG00000001972	farsa	100	84.507	Monopterus_albus
ENSDARG00000098825	farsa	99	77.823	MGP_CAROLIEiJ_G0031312	Farsa	98	77.823	Mus_caroli
ENSDARG00000098825	farsa	99	77.621	ENSMUSG00000003808	Farsa	98	77.621	Mus_musculus
ENSDARG00000098825	farsa	99	77.621	MGP_PahariEiJ_G0022917	Farsa	98	77.621	Mus_pahari
ENSDARG00000098825	farsa	99	77.823	MGP_SPRETEiJ_G0032431	Farsa	98	77.823	Mus_spretus
ENSDARG00000098825	farsa	100	77.666	ENSMPUG00000004400	FARSA	98	77.666	Mustela_putorius_furo
ENSDARG00000098825	farsa	100	77.264	ENSMLUG00000012767	FARSA	98	77.264	Myotis_lucifugus
ENSDARG00000098825	farsa	74	78.591	ENSNGAG00000018353	Farsa	100	78.591	Nannospalax_galili
ENSDARG00000098825	farsa	100	89.738	ENSNBRG00000010063	farsa	100	89.738	Neolamprologus_brichardi
ENSDARG00000098825	farsa	100	77.465	ENSNLEG00000012899	FARSA	98	77.465	Nomascus_leucogenys
ENSDARG00000098825	farsa	100	77.465	ENSMEUG00000014253	FARSA	100	77.465	Notamacropus_eugenii
ENSDARG00000098825	farsa	100	76.258	ENSOPRG00000005004	FARSA	98	76.258	Ochotona_princeps
ENSDARG00000098825	farsa	99	75.806	ENSODEG00000010433	FARSA	98	75.806	Octodon_degus
ENSDARG00000098825	farsa	100	91.348	ENSONIG00000008075	farsa	100	91.348	Oreochromis_niloticus
ENSDARG00000098825	farsa	100	87.928	ENSORLG00000016406	farsa	90	87.928	Oryzias_latipes
ENSDARG00000098825	farsa	100	88.129	ENSORLG00020021978	farsa	100	88.129	Oryzias_latipes_hni
ENSDARG00000098825	farsa	100	87.726	ENSORLG00015015045	farsa	100	87.726	Oryzias_latipes_hsok
ENSDARG00000098825	farsa	100	88.129	ENSOMEG00000017367	farsa	97	88.129	Oryzias_melastigma
ENSDARG00000098825	farsa	100	77.062	ENSOGAG00000012243	FARSA	98	77.062	Otolemur_garnettii
ENSDARG00000098825	farsa	100	76.459	ENSOARG00000009991	FARSA	92	76.459	Ovis_aries
ENSDARG00000098825	farsa	100	77.666	ENSPPAG00000034266	FARSA	98	77.666	Pan_paniscus
ENSDARG00000098825	farsa	100	77.062	ENSPPRG00000000346	FARSA	98	77.062	Panthera_pardus
ENSDARG00000098825	farsa	92	79.303	ENSPTIG00000011502	FARSA	94	79.303	Panthera_tigris_altaica
ENSDARG00000098825	farsa	100	77.666	ENSPTRG00000010550	FARSA	98	77.666	Pan_troglodytes
ENSDARG00000098825	farsa	100	77.666	ENSPANG00000010978	FARSA	98	73.441	Papio_anubis
ENSDARG00000098825	farsa	100	88.129	ENSPKIG00000007170	farsa	100	88.129	Paramormyrops_kingsleyae
ENSDARG00000098825	farsa	90	76.169	ENSPSIG00000012701	FARSA	98	76.169	Pelodiscus_sinensis
ENSDARG00000098825	farsa	100	82.696	ENSPMGG00000001401	farsa	100	82.696	Periophthalmus_magnuspinnatus
ENSDARG00000098825	farsa	100	77.062	ENSPEMG00000012560	Farsa	98	77.062	Peromyscus_maniculatus_bairdii
ENSDARG00000098825	farsa	100	79.477	ENSPMAG00000008453	farsa	100	79.477	Petromyzon_marinus
ENSDARG00000098825	farsa	100	78.068	ENSPCIG00000019294	FARSA	100	78.068	Phascolarctos_cinereus
ENSDARG00000098825	farsa	100	89.336	ENSPFOG00000001201	farsa	100	89.336	Poecilia_formosa
ENSDARG00000098825	farsa	100	89.336	ENSPLAG00000018191	farsa	100	89.336	Poecilia_latipinna
ENSDARG00000098825	farsa	100	89.537	ENSPMEG00000013547	farsa	100	89.537	Poecilia_mexicana
ENSDARG00000098825	farsa	100	84.105	ENSPREG00000013620	farsa	100	84.105	Poecilia_reticulata
ENSDARG00000098825	farsa	100	77.465	ENSPPYG00000009615	FARSA	98	77.465	Pongo_abelii
ENSDARG00000098825	farsa	100	76.459	ENSPCAG00000015721	FARSA	98	76.459	Procavia_capensis
ENSDARG00000098825	farsa	100	76.861	ENSPCOG00000014412	FARSA	98	76.861	Propithecus_coquereli
ENSDARG00000098825	farsa	86	85.185	ENSPVAG00000014714	FARSA	84	85.185	Pteropus_vampyrus
ENSDARG00000098825	farsa	100	90.744	ENSPNYG00000002144	farsa	100	90.744	Pundamilia_nyererei
ENSDARG00000098825	farsa	100	90.744	ENSPNAG00000000869	farsa	100	90.744	Pygocentrus_nattereri
ENSDARG00000098825	farsa	99	77.621	ENSRNOG00000003149	Farsa	98	77.621	Rattus_norvegicus
ENSDARG00000098825	farsa	100	77.465	ENSRBIG00000025585	FARSA	98	77.465	Rhinopithecus_bieti
ENSDARG00000098825	farsa	100	77.465	ENSRROG00000040046	FARSA	98	73.239	Rhinopithecus_roxellana
ENSDARG00000098825	farsa	93	50.844	YFL022C	FRS2	93	50.844	Saccharomyces_cerevisiae
ENSDARG00000098825	farsa	100	77.465	ENSSBOG00000031362	FARSA	98	77.465	Saimiri_boliviensis_boliviensis
ENSDARG00000098825	farsa	90	78.523	ENSSHAG00000015006	FARSA	100	78.523	Sarcophilus_harrisii
ENSDARG00000098825	farsa	100	86.117	ENSSFOG00015014864	farsa	100	86.117	Scleropages_formosus
ENSDARG00000098825	farsa	100	88.330	ENSSMAG00000002358	farsa	100	88.330	Scophthalmus_maximus
ENSDARG00000098825	farsa	100	87.928	ENSSDUG00000008631	farsa	100	87.928	Seriola_dumerili
ENSDARG00000098825	farsa	100	87.928	ENSSLDG00000017108	farsa	100	87.928	Seriola_lalandi_dorsalis
ENSDARG00000098825	farsa	67	97.059	ENSSARG00000006579	-	68	97.059	Sorex_araneus
ENSDARG00000098825	farsa	90	69.283	ENSSPUG00000012509	FARSA	99	68.330	Sphenodon_punctatus
ENSDARG00000098825	farsa	100	88.934	ENSSPAG00000018292	farsa	92	88.934	Stegastes_partitus
ENSDARG00000098825	farsa	100	76.660	ENSSSCG00000013745	FARSA	98	76.660	Sus_scrofa
ENSDARG00000098825	farsa	100	74.849	ENSTRUG00000010624	farsa	100	74.849	Takifugu_rubripes
ENSDARG00000098825	farsa	100	79.276	ENSTNIG00000008330	farsa	100	79.276	Tetraodon_nigroviridis
ENSDARG00000098825	farsa	90	75.000	ENSTBEG00000000396	FARSA	98	74.107	Tupaia_belangeri
ENSDARG00000098825	farsa	87	94.118	ENSTTRG00000003599	FARSA	85	94.118	Tursiops_truncatus
ENSDARG00000098825	farsa	100	77.264	ENSUAMG00000010230	FARSA	98	77.264	Ursus_americanus
ENSDARG00000098825	farsa	100	77.264	ENSUMAG00000006110	FARSA	98	77.264	Ursus_maritimus
ENSDARG00000098825	farsa	100	77.264	ENSVVUG00000024145	FARSA	98	77.264	Vulpes_vulpes
ENSDARG00000098825	farsa	100	79.200	ENSXETG00000007936	farsa	100	79.200	Xenopus_tropicalis
ENSDARG00000098825	farsa	100	79.719	ENSXCOG00000015512	farsa	100	79.719	Xiphophorus_couchianus
ENSDARG00000098825	farsa	100	88.129	ENSXMAG00000008832	farsa	100	88.129	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	IEA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	ISS	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component
GO:0009328	phenylalanine-tRNA ligase complex	-	ISS	Component
GO:0016874	ligase activity	-	IEA	Function
GO:0043039	tRNA aminoacylation	-	IEA	Process
GO:0051290	protein heterotetramerization	-	ISS	Process