EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098934 (Gene tree)
Gene ID: 550241
Gene Symbol: rrp7a
Alias: zgc:110084
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2906 bases
Position: chr3:1219344-1222249
Accession: ZDB-GENE-050417-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000132397	RRP7	PF12923.7	1.5e-32	1	1
ENSDARP00000132397	RRM_1	PF00076.22	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161945	-	1005	-	ENSDARP00000132397	280 (aa)	-	A0A0R4IGH7

Gene Model

Click here to download ENSDARG00000098934's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098934	rrp7a	98	44.891	ENSG00000189306	RRP7A	95	44.891	Homo_sapiens
ENSDARG00000098934	rrp7a	100	59.507	ENSAPOG00000021250	rrp7a	100	59.779	Acanthochromis_polyacanthus
ENSDARG00000098934	rrp7a	96	47.761	ENSAMEG00000009503	RRP7A	93	47.388	Ailuropoda_melanoleuca
ENSDARG00000098934	rrp7a	100	60.279	ENSACIG00000023067	rrp7a	100	60.279	Amphilophus_citrinellus
ENSDARG00000098934	rrp7a	100	59.859	ENSAOCG00000004115	rrp7a	100	59.859	Amphiprion_ocellaris
ENSDARG00000098934	rrp7a	100	60.211	ENSAPEG00000013688	rrp7a	100	60.211	Amphiprion_percula
ENSDARG00000098934	rrp7a	100	59.859	ENSATEG00000009664	rrp7a	100	59.859	Anabas_testudineus
ENSDARG00000098934	rrp7a	96	49.254	ENSACAG00000003579	RRP7A	94	49.254	Anolis_carolinensis
ENSDARG00000098934	rrp7a	98	45.455	ENSANAG00000031200	RRP7A	96	45.455	Aotus_nancymaae
ENSDARG00000098934	rrp7a	100	60.915	ENSACLG00000016790	rrp7a	100	60.915	Astatotilapia_calliptera
ENSDARG00000098934	rrp7a	100	62.544	ENSAMXG00000007921	rrp7a	96	62.544	Astyanax_mexicanus
ENSDARG00000098934	rrp7a	95	45.489	ENSBTAG00000016510	RRP7A	93	45.489	Bos_taurus
ENSDARG00000098934	rrp7a	96	45.896	ENSCJAG00000009668	RRP7A	93	45.896	Callithrix_jacchus
ENSDARG00000098934	rrp7a	96	47.388	ENSCAFG00000000965	RRP7	93	47.388	Canis_familiaris
ENSDARG00000098934	rrp7a	96	47.388	ENSCAFG00020000251	RRP7A	93	47.388	Canis_lupus_dingo
ENSDARG00000098934	rrp7a	95	45.865	ENSCHIG00000026787	RRP7A	93	45.865	Capra_hircus
ENSDARG00000098934	rrp7a	96	44.776	ENSTSYG00000000198	RRP7A	93	44.776	Carlito_syrichta
ENSDARG00000098934	rrp7a	96	44.776	ENSCAPG00000002325	RRP7A	100	44.776	Cavia_aperea
ENSDARG00000098934	rrp7a	96	45.149	ENSCPOG00000030547	RRP7A	93	45.149	Cavia_porcellus
ENSDARG00000098934	rrp7a	75	46.919	ENSCCAG00000021486	RRP7A	89	46.919	Cebus_capucinus
ENSDARG00000098934	rrp7a	96	46.642	ENSCLAG00000016715	RRP7A	93	46.642	Chinchilla_lanigera
ENSDARG00000098934	rrp7a	98	45.421	ENSCSAG00000005657	RRP7A	95	45.421	Chlorocebus_sabaeus
ENSDARG00000098934	rrp7a	96	48.881	ENSCPBG00000021814	RRP7A	94	48.881	Chrysemys_picta_bellii
ENSDARG00000098934	rrp7a	94	31.203	ENSCSAVG00000002555	-	98	31.203	Ciona_savignyi
ENSDARG00000098934	rrp7a	62	68.750	ENSCGRG00001021873	-	90	75.000	Cricetulus_griseus_chok1gshd
ENSDARG00000098934	rrp7a	82	43.913	ENSCGRG00001005713	-	99	43.478	Cricetulus_griseus_chok1gshd
ENSDARG00000098934	rrp7a	94	41.221	ENSCGRG00000000540	-	100	40.840	Cricetulus_griseus_crigri
ENSDARG00000098934	rrp7a	96	46.097	ENSCGRG00000009567	-	93	46.097	Cricetulus_griseus_crigri
ENSDARG00000098934	rrp7a	99	40.072	ENSCGRG00000000552	-	96	39.711	Cricetulus_griseus_crigri
ENSDARG00000098934	rrp7a	99	59.420	ENSCSEG00000007185	rrp7a	97	59.420	Cynoglossus_semilaevis
ENSDARG00000098934	rrp7a	100	61.268	ENSCVAG00000004349	rrp7a	100	61.268	Cyprinodon_variegatus
ENSDARG00000098934	rrp7a	99	45.652	ENSDNOG00000037442	RRP7A	89	46.014	Dasypus_novemcinctus
ENSDARG00000098934	rrp7a	99	44.803	ENSDORG00000016138	Rrp7a	97	44.803	Dipodomys_ordii
ENSDARG00000098934	rrp7a	95	34.815	FBgn0031764	CG9107	98	34.444	Drosophila_melanogaster
ENSDARG00000098934	rrp7a	94	46.565	ENSETEG00000018025	RRP7A	100	46.183	Echinops_telfairi
ENSDARG00000098934	rrp7a	99	38.768	ENSEBUG00000010231	rrp7a	93	38.768	Eptatretus_burgeri
ENSDARG00000098934	rrp7a	96	46.269	ENSEASG00005000804	RRP7A	93	45.896	Equus_asinus_asinus
ENSDARG00000098934	rrp7a	96	46.642	ENSECAG00000015168	RRP7	93	46.269	Equus_caballus
ENSDARG00000098934	rrp7a	100	60.424	ENSELUG00000009036	rrp7a	100	60.424	Esox_lucius
ENSDARG00000098934	rrp7a	96	45.522	ENSFCAG00000033258	RRP7A	74	45.522	Felis_catus
ENSDARG00000098934	rrp7a	94	49.618	ENSFALG00000011635	RRP7A	88	49.057	Ficedula_albicollis
ENSDARG00000098934	rrp7a	96	47.015	ENSFDAG00000001321	RRP7A	94	47.015	Fukomys_damarensis
ENSDARG00000098934	rrp7a	100	62.676	ENSFHEG00000006098	rrp7a	97	62.676	Fundulus_heteroclitus
ENSDARG00000098934	rrp7a	97	59.191	ENSGMOG00000006218	rrp7a	100	59.191	Gadus_morhua
ENSDARG00000098934	rrp7a	100	48.571	ENSGALG00000011866	RRP7A	100	49.286	Gallus_gallus
ENSDARG00000098934	rrp7a	100	59.507	ENSGAFG00000017459	rrp7a	100	59.507	Gambusia_affinis
ENSDARG00000098934	rrp7a	97	55.720	ENSGACG00000007212	rrp7a	100	55.720	Gasterosteus_aculeatus
ENSDARG00000098934	rrp7a	96	47.388	ENSGAGG00000014621	RRP7A	94	47.388	Gopherus_agassizii
ENSDARG00000098934	rrp7a	98	45.091	ENSGGOG00000014957	RRP7A	95	45.091	Gorilla_gorilla
ENSDARG00000098934	rrp7a	100	60.563	ENSHBUG00000021788	rrp7a	100	60.563	Haplochromis_burtoni
ENSDARG00000098934	rrp7a	96	45.956	ENSHGLG00000015706	RRP7A	94	45.588	Heterocephalus_glaber_female
ENSDARG00000098934	rrp7a	96	41.877	ENSHGLG00100009556	-	93	41.877	Heterocephalus_glaber_male
ENSDARG00000098934	rrp7a	96	44.403	ENSHGLG00100008187	-	94	44.403	Heterocephalus_glaber_male
ENSDARG00000098934	rrp7a	100	58.451	ENSHCOG00000005813	rrp7a	87	58.451	Hippocampus_comes
ENSDARG00000098934	rrp7a	97	62.500	ENSIPUG00000000556	rrp7a	96	62.500	Ictalurus_punctatus
ENSDARG00000098934	rrp7a	96	45.896	ENSSTOG00000003111	RRP7A	93	45.896	Ictidomys_tridecemlineatus
ENSDARG00000098934	rrp7a	98	44.364	ENSJJAG00000019486	Rrp7a	96	44.727	Jaculus_jaculus
ENSDARG00000098934	rrp7a	100	62.324	ENSKMAG00000013819	rrp7a	100	62.324	Kryptolebias_marmoratus
ENSDARG00000098934	rrp7a	95	48.689	ENSLACG00000002670	RRP7A	96	49.064	Latimeria_chalumnae
ENSDARG00000098934	rrp7a	96	45.149	ENSLAFG00000012447	RRP7A	93	45.149	Loxodonta_africana
ENSDARG00000098934	rrp7a	96	41.418	ENSMFAG00000041664	-	95	41.026	Macaca_fascicularis
ENSDARG00000098934	rrp7a	98	44.526	ENSMFAG00000042855	RRP7A	95	44.526	Macaca_fascicularis
ENSDARG00000098934	rrp7a	96	44.403	ENSMMUG00000010193	-	95	43.956	Macaca_mulatta
ENSDARG00000098934	rrp7a	98	40.511	ENSMMUG00000009716	RRP7A	95	40.511	Macaca_mulatta
ENSDARG00000098934	rrp7a	98	45.255	ENSMNEG00000033705	RRP7A	95	45.255	Macaca_nemestrina
ENSDARG00000098934	rrp7a	96	43.866	ENSMLEG00000040230	RRP7A	99	43.284	Mandrillus_leucophaeus
ENSDARG00000098934	rrp7a	99	63.768	ENSMAMG00000009125	rrp7a	97	63.768	Mastacembelus_armatus
ENSDARG00000098934	rrp7a	100	60.915	ENSMZEG00005005197	rrp7a	100	60.915	Maylandia_zebra
ENSDARG00000098934	rrp7a	94	49.237	ENSMGAG00000011980	RRP7A	99	49.237	Meleagris_gallopavo
ENSDARG00000098934	rrp7a	96	45.149	ENSMICG00000041800	RRP7A	93	45.149	Microcebus_murinus
ENSDARG00000098934	rrp7a	100	58.304	ENSMMOG00000004976	rrp7a	100	58.304	Mola_mola
ENSDARG00000098934	rrp7a	96	49.084	ENSMODG00000006914	RRP7A	93	49.084	Monodelphis_domestica
ENSDARG00000098934	rrp7a	100	62.324	ENSMALG00000001933	rrp7a	100	62.324	Monopterus_albus
ENSDARG00000098934	rrp7a	99	43.321	MGP_CAROLIEiJ_G0020092	Rrp7a	96	43.478	Mus_caroli
ENSDARG00000098934	rrp7a	99	43.321	ENSMUSG00000018040	Rrp7a	84	76.744	Mus_musculus
ENSDARG00000098934	rrp7a	99	42.599	MGP_PahariEiJ_G0020099	Rrp7a	96	42.754	Mus_pahari
ENSDARG00000098934	rrp7a	99	43.321	MGP_SPRETEiJ_G0020990	Rrp7a	96	43.478	Mus_spretus
ENSDARG00000098934	rrp7a	96	48.134	ENSMPUG00000016315	RRP7A	93	48.134	Mustela_putorius_furo
ENSDARG00000098934	rrp7a	96	45.149	ENSMLUG00000012404	RRP7A	93	46.269	Myotis_lucifugus
ENSDARG00000098934	rrp7a	99	43.369	ENSNGAG00000010039	Rrp7a	97	43.369	Nannospalax_galili
ENSDARG00000098934	rrp7a	99	61.484	ENSNBRG00000001824	rrp7a	100	61.484	Neolamprologus_brichardi
ENSDARG00000098934	rrp7a	98	44.526	ENSNLEG00000036258	RRP7A	95	44.526	Nomascus_leucogenys
ENSDARG00000098934	rrp7a	98	45.652	ENSODEG00000015126	RRP7A	96	45.652	Octodon_degus
ENSDARG00000098934	rrp7a	100	61.620	ENSONIG00000008364	rrp7a	99	61.620	Oreochromis_niloticus
ENSDARG00000098934	rrp7a	84	43.220	ENSOANG00000015007	RRP7A	86	42.678	Ornithorhynchus_anatinus
ENSDARG00000098934	rrp7a	99	40.143	ENSOCUG00000027434	RRP7A	97	40.143	Oryctolagus_cuniculus
ENSDARG00000098934	rrp7a	100	59.507	ENSORLG00000014826	rrp7a	100	59.507	Oryzias_latipes
ENSDARG00000098934	rrp7a	100	59.507	ENSORLG00020006078	rrp7a	100	59.507	Oryzias_latipes_hni
ENSDARG00000098934	rrp7a	100	59.507	ENSORLG00015018190	rrp7a	100	58.803	Oryzias_latipes_hsok
ENSDARG00000098934	rrp7a	99	59.058	ENSOMEG00000007090	rrp7a	98	59.783	Oryzias_melastigma
ENSDARG00000098934	rrp7a	96	43.657	ENSOGAG00000002857	RRP7A	93	44.030	Otolemur_garnettii
ENSDARG00000098934	rrp7a	95	45.489	ENSOARG00000018986	RRP7A	93	45.489	Ovis_aries
ENSDARG00000098934	rrp7a	76	41.818	ENSPPAG00000029825	-	85	41.818	Pan_paniscus
ENSDARG00000098934	rrp7a	78	45.622	ENSPPAG00000021416	-	77	45.622	Pan_paniscus
ENSDARG00000098934	rrp7a	96	46.269	ENSPPRG00000022185	RRP7A	93	46.269	Panthera_pardus
ENSDARG00000098934	rrp7a	96	32.721	ENSPTIG00000020965	RRP7A	92	34.191	Panthera_tigris_altaica
ENSDARG00000098934	rrp7a	98	42.125	ENSPANG00000032001	-	95	42.701	Papio_anubis
ENSDARG00000098934	rrp7a	98	44.526	ENSPANG00000025354	-	95	44.526	Papio_anubis
ENSDARG00000098934	rrp7a	100	56.690	ENSPKIG00000007209	rrp7a	86	57.042	Paramormyrops_kingsleyae
ENSDARG00000098934	rrp7a	89	51.210	ENSPSIG00000007988	RRP7A	92	51.210	Pelodiscus_sinensis
ENSDARG00000098934	rrp7a	70	84.337	ENSPMGG00000009485	rrp7a	91	49.049	Periophthalmus_magnuspinnatus
ENSDARG00000098934	rrp7a	96	45.522	ENSPEMG00000022265	Rrp7a	93	45.149	Peromyscus_maniculatus_bairdii
ENSDARG00000098934	rrp7a	95	44.528	ENSPMAG00000002823	rrp7a	94	44.528	Petromyzon_marinus
ENSDARG00000098934	rrp7a	96	48.727	ENSPCIG00000026195	RRP7A	93	48.727	Phascolarctos_cinereus
ENSDARG00000098934	rrp7a	100	60.211	ENSPFOG00000001042	rrp7a	100	60.211	Poecilia_formosa
ENSDARG00000098934	rrp7a	61	66.279	ENSPLAG00000009537	rrp7a	72	66.279	Poecilia_latipinna
ENSDARG00000098934	rrp7a	61	66.279	ENSPLAG00000010787	-	72	66.279	Poecilia_latipinna
ENSDARG00000098934	rrp7a	100	60.563	ENSPMEG00000018204	rrp7a	100	60.563	Poecilia_mexicana
ENSDARG00000098934	rrp7a	100	58.803	ENSPREG00000016492	rrp7a	100	58.803	Poecilia_reticulata
ENSDARG00000098934	rrp7a	98	45.255	ENSPPYG00000011897	RRP7A	95	45.255	Pongo_abelii
ENSDARG00000098934	rrp7a	98	44.526	ENSPCOG00000014018	RRP7A	95	44.526	Propithecus_coquereli
ENSDARG00000098934	rrp7a	86	42.083	ENSPVAG00000003330	RRP7A	92	42.083	Pteropus_vampyrus
ENSDARG00000098934	rrp7a	100	60.915	ENSPNYG00000020343	rrp7a	100	60.915	Pundamilia_nyererei
ENSDARG00000098934	rrp7a	98	63.504	ENSPNAG00000014376	rrp7a	96	63.971	Pygocentrus_nattereri
ENSDARG00000098934	rrp7a	96	45.522	ENSRNOG00000022896	Rrp7a	93	45.149	Rattus_norvegicus
ENSDARG00000098934	rrp7a	96	42.379	ENSRBIG00000040358	RRP7A	95	41.241	Rhinopithecus_bieti
ENSDARG00000098934	rrp7a	96	45.353	ENSRROG00000036754	RRP7A	95	44.891	Rhinopithecus_roxellana
ENSDARG00000098934	rrp7a	98	44.727	ENSSBOG00000009234	RRP7A	96	45.290	Saimiri_boliviensis_boliviensis
ENSDARG00000098934	rrp7a	76	50.467	ENSSHAG00000005715	RRP7A	100	50.467	Sarcophilus_harrisii
ENSDARG00000098934	rrp7a	100	60.777	ENSSFOG00015012621	rrp7a	89	59.364	Scleropages_formosus
ENSDARG00000098934	rrp7a	100	60.563	ENSSMAG00000004593	rrp7a	100	60.563	Scophthalmus_maximus
ENSDARG00000098934	rrp7a	100	60.563	ENSSDUG00000016921	rrp7a	100	60.563	Seriola_dumerili
ENSDARG00000098934	rrp7a	100	60.211	ENSSLDG00000024758	rrp7a	100	60.211	Seriola_lalandi_dorsalis
ENSDARG00000098934	rrp7a	62	71.429	ENSSARG00000002133	-	66	71.429	Sorex_araneus
ENSDARG00000098934	rrp7a	90	43.825	ENSSPUG00000005373	RRP7A	98	44.358	Sphenodon_punctatus
ENSDARG00000098934	rrp7a	100	60.211	ENSSPAG00000016048	rrp7a	100	60.211	Stegastes_partitus
ENSDARG00000098934	rrp7a	97	44.853	ENSSSCG00000033983	RRP7A	95	45.221	Sus_scrofa
ENSDARG00000098934	rrp7a	94	51.145	ENSTGUG00000009647	RRP7A	100	51.527	Taeniopygia_guttata
ENSDARG00000098934	rrp7a	100	56.690	ENSTRUG00000024726	rrp7a	100	56.690	Takifugu_rubripes
ENSDARG00000098934	rrp7a	100	57.746	ENSTNIG00000010842	rrp7a	99	57.746	Tetraodon_nigroviridis
ENSDARG00000098934	rrp7a	96	48.507	ENSUAMG00000026180	RRP7A	93	48.134	Ursus_americanus
ENSDARG00000098934	rrp7a	96	46.642	ENSUMAG00000020394	RRP7A	93	46.269	Ursus_maritimus
ENSDARG00000098934	rrp7a	94	46.947	ENSVVUG00000002248	-	65	46.768	Vulpes_vulpes
ENSDARG00000098934	rrp7a	100	45.196	ENSXETG00000013414	rrp7a	100	45.196	Xenopus_tropicalis
ENSDARG00000098934	rrp7a	100	60.351	ENSXCOG00000015955	rrp7a	100	60.351	Xiphophorus_couchianus
ENSDARG00000098934	rrp7a	100	60.563	ENSXMAG00000006165	rrp7a	100	60.563	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0032545	CURI complex	21873635.	IBA	Component
GO:0034456	UTP-C complex	21873635.	IBA	Component