EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098972 (Gene tree)
Gene ID: 450009
Gene Symbol: mrps16
Alias: fi21d03|wu:fi21d03|zgc:103459
Full Name: mitochondrial ribosomal protein S16
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6781 bases
Position: chr11:41216191-41222971
Accession: ZDB-GENE-041010-123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154790	Ribosomal_S16	PF00886.19	3.4e-21	1	1
ENSDARP00000138425	Ribosomal_S16	PF00886.19	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163609	-	1084	-	ENSDARP00000138425	129 (aa)	-	A0A0R4IRT6
ENSDART00000192895	-	394	-	ENSDARP00000154790	129 (aa)	-	A0A2R8QP54

Gene Model

Click here to download ENSDARG00000098972's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098972	mrps16	99	64.844	ENSG00000182180	MRPS16	94	70.968	Homo_sapiens
ENSDARG00000098972	mrps16	86	81.416	ENSAPOG00000012117	mrps16	95	73.282	Acanthochromis_polyacanthus
ENSDARG00000098972	mrps16	96	62.097	ENSAMEG00000016931	MRPS16	95	62.097	Ailuropoda_melanoleuca
ENSDARG00000098972	mrps16	95	77.419	ENSACIG00000008004	mrps16	91	77.419	Amphilophus_citrinellus
ENSDARG00000098972	mrps16	86	82.301	ENSAOCG00000006801	mrps16	95	74.809	Amphiprion_ocellaris
ENSDARG00000098972	mrps16	86	81.416	ENSAPEG00000004562	mrps16	95	74.046	Amphiprion_percula
ENSDARG00000098972	mrps16	100	74.046	ENSATEG00000024962	mrps16	95	74.046	Anabas_testudineus
ENSDARG00000098972	mrps16	99	64.844	ENSANAG00000036208	MRPS16	94	70.968	Aotus_nancymaae
ENSDARG00000098972	mrps16	85	83.929	ENSACLG00000016154	mrps16	91	76.378	Astatotilapia_calliptera
ENSDARG00000098972	mrps16	88	84.956	ENSAMXG00000040279	mrps16	98	76.744	Astyanax_mexicanus
ENSDARG00000098972	mrps16	84	54.128	ENSBTAG00000053412	-	99	54.128	Bos_taurus
ENSDARG00000098972	mrps16	96	64.062	ENSBTAG00000000950	MRPS16	95	64.062	Bos_taurus
ENSDARG00000098972	mrps16	90	42.500	WBGene00018961	mrps-16	84	41.600	Caenorhabditis_elegans
ENSDARG00000098972	mrps16	99	64.062	ENSCJAG00000007538	MRPS16	94	69.892	Callithrix_jacchus
ENSDARG00000098972	mrps16	86	54.054	ENSCAFG00000008928	-	82	54.054	Canis_familiaris
ENSDARG00000098972	mrps16	99	63.281	ENSCAFG00000031286	-	64	63.281	Canis_familiaris
ENSDARG00000098972	mrps16	98	62.698	ENSCAFG00020023773	-	93	62.698	Canis_lupus_dingo
ENSDARG00000098972	mrps16	80	66.019	ENSCAFG00020025503	-	90	60.526	Canis_lupus_dingo
ENSDARG00000098972	mrps16	88	51.754	ENSCHIG00000016255	-	83	51.754	Capra_hircus
ENSDARG00000098972	mrps16	70	62.222	ENSTSYG00000026797	-	77	62.222	Carlito_syrichta
ENSDARG00000098972	mrps16	98	45.669	ENSTSYG00000014457	-	94	45.669	Carlito_syrichta
ENSDARG00000098972	mrps16	99	64.062	ENSTSYG00000034400	-	94	69.892	Carlito_syrichta
ENSDARG00000098972	mrps16	70	61.111	ENSTSYG00000036920	-	79	61.111	Carlito_syrichta
ENSDARG00000098972	mrps16	95	58.537	ENSCAPG00000015053	MRPS16	95	58.537	Cavia_aperea
ENSDARG00000098972	mrps16	99	66.406	ENSCPOG00000025500	MRPS16	95	66.406	Cavia_porcellus
ENSDARG00000098972	mrps16	99	66.406	ENSCCAG00000037051	MRPS16	95	72.043	Cebus_capucinus
ENSDARG00000098972	mrps16	99	64.062	ENSCATG00000040457	MRPS16	94	70.968	Cercocebus_atys
ENSDARG00000098972	mrps16	99	64.062	ENSCLAG00000010443	MRPS16	95	64.062	Chinchilla_lanigera
ENSDARG00000098972	mrps16	99	65.625	ENSCSAG00000000413	-	93	65.625	Chlorocebus_sabaeus
ENSDARG00000098972	mrps16	99	64.844	ENSCSAG00000018976	-	93	64.844	Chlorocebus_sabaeus
ENSDARG00000098972	mrps16	99	64.844	ENSCSAG00000018977	-	93	64.844	Chlorocebus_sabaeus
ENSDARG00000098972	mrps16	99	64.844	ENSCHOG00000012520	MRPS16	96	64.844	Choloepus_hoffmanni
ENSDARG00000098972	mrps16	98	72.441	ENSCPBG00000022282	MRPS16	98	72.441	Chrysemys_picta_bellii
ENSDARG00000098972	mrps16	80	49.091	ENSCING00000024826	-	73	45.968	Ciona_intestinalis
ENSDARG00000098972	mrps16	84	48.649	ENSCSAVG00000006333	-	64	48.649	Ciona_savignyi
ENSDARG00000098972	mrps16	99	67.188	ENSCANG00000010568	MRPS16	94	74.194	Colobus_angolensis_palliatus
ENSDARG00000098972	mrps16	99	63.281	ENSCGRG00001023386	Mrps16	95	63.281	Cricetulus_griseus_chok1gshd
ENSDARG00000098972	mrps16	99	63.281	ENSCGRG00000002182	Mrps16	95	63.281	Cricetulus_griseus_crigri
ENSDARG00000098972	mrps16	99	73.077	ENSCSEG00000021662	mrps16	95	72.656	Cynoglossus_semilaevis
ENSDARG00000098972	mrps16	99	73.684	ENSCVAG00000012001	mrps16	99	73.684	Cyprinodon_variegatus
ENSDARG00000098972	mrps16	91	70.085	ENSDNOG00000047675	MRPS16	97	65.152	Dasypus_novemcinctus
ENSDARG00000098972	mrps16	70	63.333	ENSDORG00000023262	-	95	63.333	Dipodomys_ordii
ENSDARG00000098972	mrps16	99	63.281	ENSDORG00000008275	-	95	63.281	Dipodomys_ordii
ENSDARG00000098972	mrps16	98	42.857	FBgn0033907	mRpS16	98	42.857	Drosophila_melanogaster
ENSDARG00000098972	mrps16	78	56.000	ENSEBUG00000001088	mrps16	85	56.000	Eptatretus_burgeri
ENSDARG00000098972	mrps16	91	65.812	ENSEASG00005017192	MRPS16	89	65.812	Equus_asinus_asinus
ENSDARG00000098972	mrps16	91	65.812	ENSECAG00000009146	MRPS16	89	65.812	Equus_caballus
ENSDARG00000098972	mrps16	100	73.282	ENSELUG00000011609	mrps16	98	73.282	Esox_lucius
ENSDARG00000098972	mrps16	99	63.281	ENSFCAG00000037310	MRPS16	95	63.281	Felis_catus
ENSDARG00000098972	mrps16	83	59.813	ENSFALG00000009917	MRPS16	93	54.615	Ficedula_albicollis
ENSDARG00000098972	mrps16	90	68.966	ENSFDAG00000014014	MRPS16	93	63.281	Fukomys_damarensis
ENSDARG00000098972	mrps16	98	73.282	ENSFHEG00000022624	mrps16	96	73.282	Fundulus_heteroclitus
ENSDARG00000098972	mrps16	84	80.180	ENSGMOG00000001558	mrps16	86	80.180	Gadus_morhua
ENSDARG00000098972	mrps16	84	71.296	ENSGALG00000050621	MRPS16	90	68.132	Gallus_gallus
ENSDARG00000098972	mrps16	100	69.466	ENSGAFG00000012456	mrps16	96	69.466	Gambusia_affinis
ENSDARG00000098972	mrps16	100	70.992	ENSGACG00000001715	mrps16	95	70.992	Gasterosteus_aculeatus
ENSDARG00000098972	mrps16	98	74.603	ENSGAGG00000000097	-	87	74.603	Gopherus_agassizii
ENSDARG00000098972	mrps16	98	50.000	ENSGAGG00000005030	-	97	50.000	Gopherus_agassizii
ENSDARG00000098972	mrps16	99	64.844	ENSGGOG00000015055	MRPS16	93	64.844	Gorilla_gorilla
ENSDARG00000098972	mrps16	99	75.000	ENSHBUG00000015492	mrps16	98	75.000	Haplochromis_burtoni
ENSDARG00000098972	mrps16	99	64.062	ENSHGLG00000012797	MRPS16	95	64.062	Heterocephalus_glaber_female
ENSDARG00000098972	mrps16	99	64.062	ENSHGLG00100007890	MRPS16	95	64.062	Heterocephalus_glaber_male
ENSDARG00000098972	mrps16	98	74.219	ENSHCOG00000020173	mrps16	99	74.219	Hippocampus_comes
ENSDARG00000098972	mrps16	89	86.957	ENSIPUG00000003397	mrps16	98	80.916	Ictalurus_punctatus
ENSDARG00000098972	mrps16	99	65.625	ENSSTOG00000027184	MRPS16	95	65.625	Ictidomys_tridecemlineatus
ENSDARG00000098972	mrps16	99	60.938	ENSJJAG00000023255	Mrps16	96	60.938	Jaculus_jaculus
ENSDARG00000098972	mrps16	97	71.654	ENSKMAG00000009755	mrps16	92	71.654	Kryptolebias_marmoratus
ENSDARG00000098972	mrps16	100	70.229	ENSLBEG00000024661	mrps16	95	70.229	Labrus_bergylta
ENSDARG00000098972	mrps16	87	83.036	ENSLACG00000019160	MRPS16	94	75.969	Latimeria_chalumnae
ENSDARG00000098972	mrps16	100	75.194	ENSLOCG00000003927	mrps16	96	75.194	Lepisosteus_oculatus
ENSDARG00000098972	mrps16	96	60.484	ENSLAFG00000023124	MRPS16	95	60.484	Loxodonta_africana
ENSDARG00000098972	mrps16	99	64.062	ENSMFAG00000032103	MRPS16	93	64.062	Macaca_fascicularis
ENSDARG00000098972	mrps16	72	70.968	ENSMMUG00000011284	MRPS16	94	70.968	Macaca_mulatta
ENSDARG00000098972	mrps16	99	64.062	ENSMNEG00000041963	MRPS16	94	70.968	Macaca_nemestrina
ENSDARG00000098972	mrps16	99	64.062	ENSMLEG00000044343	MRPS16	94	70.968	Mandrillus_leucophaeus
ENSDARG00000098972	mrps16	98	76.562	ENSMAMG00000015181	mrps16	94	76.562	Mastacembelus_armatus
ENSDARG00000098972	mrps16	84	68.807	ENSMGAG00000000893	MRPS16	89	64.754	Meleagris_gallopavo
ENSDARG00000098972	mrps16	99	64.062	ENSMAUG00000010491	Mrps16	95	64.062	Mesocricetus_auratus
ENSDARG00000098972	mrps16	99	64.062	ENSMICG00000042573	MRPS16	95	64.062	Microcebus_murinus
ENSDARG00000098972	mrps16	99	61.719	ENSMOCG00000006927	Mrps16	95	61.719	Microtus_ochrogaster
ENSDARG00000098972	mrps16	89	76.923	ENSMMOG00000010770	mrps16	96	73.438	Mola_mola
ENSDARG00000098972	mrps16	98	62.205	ENSMODG00000000168	MRPS16	96	62.205	Monodelphis_domestica
ENSDARG00000098972	mrps16	99	72.308	ENSMALG00000007222	mrps16	93	72.308	Monopterus_albus
ENSDARG00000098972	mrps16	81	72.381	MGP_CAROLIEiJ_G0018987	Mrps16	95	64.844	Mus_caroli
ENSDARG00000098972	mrps16	81	71.429	ENSMUSG00000049960	Mrps16	95	64.062	Mus_musculus
ENSDARG00000098972	mrps16	82	69.811	MGP_PahariEiJ_G0030001	Mrps16	95	63.281	Mus_pahari
ENSDARG00000098972	mrps16	81	72.381	MGP_SPRETEiJ_G0019865	Mrps16	95	64.844	Mus_spretus
ENSDARG00000098972	mrps16	99	63.281	ENSMPUG00000003777	MRPS16	83	63.281	Mustela_putorius_furo
ENSDARG00000098972	mrps16	91	69.231	ENSMLUG00000022951	MRPS16	95	64.844	Myotis_lucifugus
ENSDARG00000098972	mrps16	99	61.654	ENSNGAG00000019881	Mrps16	99	61.654	Nannospalax_galili
ENSDARG00000098972	mrps16	85	84.821	ENSNBRG00000020914	mrps16	91	77.165	Neolamprologus_brichardi
ENSDARG00000098972	mrps16	79	62.745	ENSNLEG00000029922	-	78	62.745	Nomascus_leucogenys
ENSDARG00000098972	mrps16	99	63.281	ENSNLEG00000018904	-	93	63.281	Nomascus_leucogenys
ENSDARG00000098972	mrps16	99	64.844	ENSNLEG00000016597	-	94	70.968	Nomascus_leucogenys
ENSDARG00000098972	mrps16	84	73.636	ENSMEUG00000008644	MRPS16	90	73.636	Notamacropus_eugenii
ENSDARG00000098972	mrps16	99	65.116	ENSOPRG00000018616	MRPS16	98	65.116	Ochotona_princeps
ENSDARG00000098972	mrps16	57	72.973	ENSODEG00000013980	-	93	72.973	Octodon_degus
ENSDARG00000098972	mrps16	90	71.552	ENSODEG00000019541	-	95	65.625	Octodon_degus
ENSDARG00000098972	mrps16	99	74.242	ENSONIG00000014282	mrps16	98	74.242	Oreochromis_niloticus
ENSDARG00000098972	mrps16	99	67.188	ENSOANG00000012378	MRPS16	93	67.188	Ornithorhynchus_anatinus
ENSDARG00000098972	mrps16	96	69.600	ENSOCUG00000023231	-	92	69.841	Oryctolagus_cuniculus
ENSDARG00000098972	mrps16	96	66.400	ENSOCUG00000024223	-	92	66.667	Oryctolagus_cuniculus
ENSDARG00000098972	mrps16	88	81.897	ENSORLG00000022084	mrps16	95	74.809	Oryzias_latipes
ENSDARG00000098972	mrps16	88	80.172	ENSORLG00020019793	mrps16	95	74.046	Oryzias_latipes_hni
ENSDARG00000098972	mrps16	88	81.034	ENSORLG00015015664	mrps16	95	74.809	Oryzias_latipes_hsok
ENSDARG00000098972	mrps16	100	70.455	ENSOMEG00000021490	mrps16	97	70.455	Oryzias_melastigma
ENSDARG00000098972	mrps16	99	66.406	ENSOGAG00000033867	MRPS16	93	66.406	Otolemur_garnettii
ENSDARG00000098972	mrps16	96	64.844	ENSOARG00000007548	MRPS16	83	64.844	Ovis_aries
ENSDARG00000098972	mrps16	99	64.844	ENSPPAG00000009406	MRPS16	93	64.844	Pan_paniscus
ENSDARG00000098972	mrps16	99	63.281	ENSPPRG00000024759	MRPS16	95	63.281	Panthera_pardus
ENSDARG00000098972	mrps16	99	63.281	ENSPTIG00000021428	MRPS16	95	63.281	Panthera_tigris_altaica
ENSDARG00000098972	mrps16	84	62.385	ENSPTRG00000044912	-	99	62.385	Pan_troglodytes
ENSDARG00000098972	mrps16	99	64.844	ENSPTRG00000002627	MRPS16	93	64.844	Pan_troglodytes
ENSDARG00000098972	mrps16	99	63.281	ENSPANG00000022374	MRPS16	94	69.892	Papio_anubis
ENSDARG00000098972	mrps16	100	74.615	ENSPKIG00000013816	mrps16	94	74.615	Paramormyrops_kingsleyae
ENSDARG00000098972	mrps16	98	72.222	ENSPSIG00000005589	MRPS16	88	72.222	Pelodiscus_sinensis
ENSDARG00000098972	mrps16	98	77.344	ENSPMGG00000013450	mrps16	99	77.344	Periophthalmus_magnuspinnatus
ENSDARG00000098972	mrps16	99	63.281	ENSPEMG00000021378	Mrps16	95	63.281	Peromyscus_maniculatus_bairdii
ENSDARG00000098972	mrps16	91	69.231	ENSPCIG00000015166	MRPS16	89	69.231	Phascolarctos_cinereus
ENSDARG00000098972	mrps16	100	70.370	ENSPFOG00000014130	mrps16	98	70.370	Poecilia_formosa
ENSDARG00000098972	mrps16	100	69.630	ENSPLAG00000018686	mrps16	98	69.630	Poecilia_latipinna
ENSDARG00000098972	mrps16	100	70.370	ENSPMEG00000009648	mrps16	98	70.370	Poecilia_mexicana
ENSDARG00000098972	mrps16	100	70.149	ENSPREG00000005800	mrps16	98	70.149	Poecilia_reticulata
ENSDARG00000098972	mrps16	99	63.281	ENSPCOG00000009898	MRPS16	95	63.281	Propithecus_coquereli
ENSDARG00000098972	mrps16	99	62.500	ENSPVAG00000012996	MRPS16	96	62.500	Pteropus_vampyrus
ENSDARG00000098972	mrps16	99	74.242	ENSPNYG00000018439	mrps16	98	74.242	Pundamilia_nyererei
ENSDARG00000098972	mrps16	98	84.375	ENSPNAG00000027291	mrps16	96	84.375	Pygocentrus_nattereri
ENSDARG00000098972	mrps16	98	64.615	ENSRNOG00000006898	Mrps16	96	64.615	Rattus_norvegicus
ENSDARG00000098972	mrps16	99	67.188	ENSRBIG00000037015	MRPS16	94	74.194	Rhinopithecus_bieti
ENSDARG00000098972	mrps16	99	67.188	ENSRROG00000040939	MRPS16	94	74.194	Rhinopithecus_roxellana
ENSDARG00000098972	mrps16	99	64.844	ENSSBOG00000016492	MRPS16	94	72.043	Saimiri_boliviensis_boliviensis
ENSDARG00000098972	mrps16	99	62.500	ENSSHAG00000003006	MRPS16	95	62.500	Sarcophilus_harrisii
ENSDARG00000098972	mrps16	96	75.806	ENSSFOG00015007264	mrps16	95	74.809	Scleropages_formosus
ENSDARG00000098972	mrps16	100	74.046	ENSSMAG00000014748	mrps16	96	74.046	Scophthalmus_maximus
ENSDARG00000098972	mrps16	99	74.615	ENSSDUG00000015177	mrps16	94	74.615	Seriola_dumerili
ENSDARG00000098972	mrps16	99	74.615	ENSSLDG00000004507	mrps16	94	74.615	Seriola_lalandi_dorsalis
ENSDARG00000098972	mrps16	100	64.706	ENSSPUG00000012312	MRPS16	99	64.706	Sphenodon_punctatus
ENSDARG00000098972	mrps16	84	82.727	ENSSPAG00000007520	mrps16	99	73.333	Stegastes_partitus
ENSDARG00000098972	mrps16	81	81.308	ENSTRUG00000021325	mrps16	99	75.385	Takifugu_rubripes
ENSDARG00000098972	mrps16	100	71.756	ENSTNIG00000014796	MRPS16	95	71.756	Tetraodon_nigroviridis
ENSDARG00000098972	mrps16	100	71.756	ENSTNIG00000006736	mrps16	95	71.756	Tetraodon_nigroviridis
ENSDARG00000098972	mrps16	92	65.041	ENSTTRG00000000825	MRPS16	96	65.041	Tursiops_truncatus
ENSDARG00000098972	mrps16	99	61.719	ENSUAMG00000005153	MRPS16	95	61.719	Ursus_americanus
ENSDARG00000098972	mrps16	99	61.719	ENSUMAG00000009089	MRPS16	95	61.719	Ursus_maritimus
ENSDARG00000098972	mrps16	92	64.228	ENSVPAG00000007263	MRPS16	96	64.228	Vicugna_pacos
ENSDARG00000098972	mrps16	98	61.111	ENSVVUG00000022733	-	93	61.111	Vulpes_vulpes
ENSDARG00000098972	mrps16	63	70.370	ENSVVUG00000005415	-	75	70.370	Vulpes_vulpes
ENSDARG00000098972	mrps16	98	70.229	ENSXETG00000001399	mrps16	93	70.229	Xenopus_tropicalis
ENSDARG00000098972	mrps16	93	70.492	ENSXCOG00000008280	mrps16	96	70.492	Xiphophorus_couchianus
ENSDARG00000098972	mrps16	98	72.656	ENSXMAG00000000052	mrps16	96	72.656	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process