EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000098986 (Gene tree)
Gene ID: 101884948
Gene Symbol: znf1040
Alias: si:dkey-240b24.2
Full Name: zinc finger protein 1040
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 15676 bases
Position: chr4:47656992-47672667
Accession: ZDB-GENE-141210-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	1	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	2	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	3	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	4	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	5	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	6	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	7	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	8	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	9	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	10	11
ENSDARP00000131561	zf-C2H2	PF00096.26	6.9e-66	11	11
ENSDARP00000131561	zf-met	PF12874.7	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161148	-	2791	XM_017355586	ENSDARP00000131561	420 (aa)	XP_017211075	A0A0G2KGX6

Gene Model

Click here to download ENSDARG00000098986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000098986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000098986	znf1040	100	61.905	ENSDARG00000110229	zgc:173702	100	64.286
ENSDARG00000098986	znf1040	99	60.227	ENSDARG00000113626	znf976	99	59.403
ENSDARG00000098986	znf1040	99	68.127	ENSDARG00000112103	si:dkey-16p19.1	99	68.127
ENSDARG00000098986	znf1040	93	59.164	ENSDARG00000116177	znf1127	92	64.359
ENSDARG00000098986	znf1040	100	85.238	ENSDARG00000101137	znf999	100	91.429
ENSDARG00000098986	znf1040	99	56.802	ENSDARG00000105137	zgc:173705	99	61.814
ENSDARG00000098986	znf1040	99	60.096	ENSDARG00000111465	znf1104	100	58.507
ENSDARG00000098986	znf1040	99	53.405	ENSDARG00000093041	si:ch211-234c11.2	93	53.405
ENSDARG00000098986	znf1040	99	49.522	ENSDARG00000074298	znf1015	100	55.556
ENSDARG00000098986	znf1040	100	82.596	ENSDARG00000088000	znf1057	100	82.596
ENSDARG00000098986	znf1040	99	69.799	ENSDARG00000076272	znf1041	99	66.890
ENSDARG00000098986	znf1040	93	54.731	ENSDARG00000103495	zgc:173714	99	61.381
ENSDARG00000098986	znf1040	99	49.351	ENSDARG00000102800	CABZ01081752.2	99	49.593
ENSDARG00000098986	znf1040	100	61.905	ENSDARG00000105306	si:dkeyp-44b5.5	100	64.286
ENSDARG00000098986	znf1040	100	69.804	ENSDARG00000102791	zgc:174704	100	59.286
ENSDARG00000098986	znf1040	100	61.429	ENSDARG00000094558	si:dkeyp-53e4.1	100	63.571
ENSDARG00000098986	znf1040	99	68.254	ENSDARG00000114793	CU182823.4	98	68.254
ENSDARG00000098986	znf1040	99	91.500	ENSDARG00000102837	znf1145	100	91.500
ENSDARG00000098986	znf1040	99	81.602	ENSDARG00000100509	si:dkey-82i20.2	100	81.602
ENSDARG00000098986	znf1040	92	73.012	ENSDARG00000086449	znf1055	100	77.857
ENSDARG00000098986	znf1040	100	60.476	ENSDARG00000100842	si:ch211-223a21.4	100	63.333
ENSDARG00000098986	znf1040	99	54.183	ENSDARG00000098604	si:dkey-14o6.4	99	54.183
ENSDARG00000098986	znf1040	100	94.762	ENSDARG00000102600	CABZ01003344.1	100	94.762
ENSDARG00000098986	znf1040	99	69.074	ENSDARG00000091477	znf1066	100	65.914
ENSDARG00000098986	znf1040	99	64.143	ENSDARG00000111550	CABZ01002702.1	99	66.518
ENSDARG00000098986	znf1040	100	62.143	ENSDARG00000103636	zgc:173702	100	64.524
ENSDARG00000098986	znf1040	89	53.134	ENSDARG00000098021	si:dkey-111k8.2	97	52.836
ENSDARG00000098986	znf1040	99	55.249	ENSDARG00000098991	znf1095	98	55.249
ENSDARG00000098986	znf1040	99	80.313	ENSDARG00000098270	znf1053	99	76.510
ENSDARG00000098986	znf1040	99	57.995	ENSDARG00000100001	znf1096	99	62.530
ENSDARG00000098986	znf1040	99	57.801	ENSDARG00000110852	znf1111	99	57.801
ENSDARG00000098986	znf1040	100	72.381	ENSDARG00000104407	BX649453.1	100	81.190
ENSDARG00000098986	znf1040	99	47.877	ENSDARG00000090942	CABZ01054394.1	98	47.877
ENSDARG00000098986	znf1040	100	86.905	ENSDARG00000096210	znf1050	100	86.905
ENSDARG00000098986	znf1040	100	95.000	ENSDARG00000116216	znf1046	100	95.000
ENSDARG00000098986	znf1040	99	82.609	ENSDARG00000093994	znf1058	100	82.609
ENSDARG00000098986	znf1040	99	41.202	ENSDARG00000089598	si:cabz01054396.2	100	54.444
ENSDARG00000098986	znf1040	99	81.899	ENSDARG00000098536	si:dkey-25i10.1	100	81.899
ENSDARG00000098986	znf1040	99	54.980	ENSDARG00000103346	si:dkeyp-85d8.5	99	54.980
ENSDARG00000098986	znf1040	100	57.381	ENSDARG00000115655	znf1078	100	56.429
ENSDARG00000098986	znf1040	99	51.807	ENSDARG00000074365	zgc:171901	100	57.317
ENSDARG00000098986	znf1040	100	95.476	ENSDARG00000091994	znf1048	100	95.476
ENSDARG00000098986	znf1040	99	53.631	ENSDARG00000109255	si:ch211-234c11.2	99	53.631
ENSDARG00000098986	znf1040	99	54.965	ENSDARG00000114396	znf1017	100	54.965
ENSDARG00000098986	znf1040	99	55.932	ENSDARG00000098901	CABZ01002768.1	100	59.518
ENSDARG00000098986	znf1040	100	61.190	ENSDARG00000090160	zgc:173709	100	64.286
ENSDARG00000098986	znf1040	99	67.331	ENSDARG00000103721	si:dkey-122c11.7	99	67.331
ENSDARG00000098986	znf1040	100	76.681	ENSDARG00000105067	znf1043	100	80.826
ENSDARG00000098986	znf1040	100	58.095	ENSDARG00000098430	znf1078	100	62.143
ENSDARG00000098986	znf1040	100	58.333	ENSDARG00000114947	BX465848.1	100	62.381
ENSDARG00000098986	znf1040	100	61.429	ENSDARG00000100961	zgc:174653	93	69.286
ENSDARG00000098986	znf1040	100	58.095	ENSDARG00000098196	znf1077	100	61.429
ENSDARG00000098986	znf1040	99	87.081	ENSDARG00000098071	znf1049	100	87.081
ENSDARG00000098986	znf1040	94	56.389	ENSDARG00000116920	BX465848.2	91	60.814
ENSDARG00000098986	znf1040	100	67.381	ENSDARG00000102673	si:dkey-26i24.1	100	67.381
ENSDARG00000098986	znf1040	100	57.143	ENSDARG00000101327	znf1076	100	55.714
ENSDARG00000098986	znf1040	99	45.412	ENSDARG00000097812	si:ch73-144d13.5	99	47.980
ENSDARG00000098986	znf1040	99	62.053	ENSDARG00000096189	si:dkey-54j5.2	99	62.530
ENSDARG00000098986	znf1040	88	56.962	ENSDARG00000094484	si:ch211-162i8.4	96	61.233
ENSDARG00000098986	znf1040	100	57.619	ENSDARG00000099736	CABZ01075078.1	100	60.476
ENSDARG00000098986	znf1040	99	70.518	ENSDARG00000102008	si:dkey-72l17.6	99	59.375
ENSDARG00000098986	znf1040	99	52.507	ENSDARG00000096828	si:ch73-144d13.7	98	52.507
ENSDARG00000098986	znf1040	99	55.319	ENSDARG00000087168	si:ch211-162i8.4	97	55.028
ENSDARG00000098986	znf1040	99	70.916	ENSDARG00000113808	si:dkeyp-82b4.6	99	57.706
ENSDARG00000098986	znf1040	88	51.045	ENSDARG00000087290	si:ch211-202h22.10	93	51.045
ENSDARG00000098986	znf1040	99	51.235	ENSDARG00000103244	CABZ01081752.3	98	48.571
ENSDARG00000098986	znf1040	100	85.476	ENSDARG00000104074	znf1052	100	85.476
ENSDARG00000098986	znf1040	99	57.995	ENSDARG00000114437	zgc:173705	99	63.484
ENSDARG00000098986	znf1040	99	59.615	ENSDARG00000094443	znf1036	93	55.814
ENSDARG00000098986	znf1040	93	61.702	ENSDARG00000095605	CR846087.3	100	60.256
ENSDARG00000098986	znf1040	99	50.173	ENSDARG00000092507	znf1013	98	50.600
ENSDARG00000098986	znf1040	100	95.238	ENSDARG00000092938	znf1047	100	95.238
ENSDARG00000098986	znf1040	99	46.739	ENSDARG00000086223	si:ch73-144d13.4	100	48.016
ENSDARG00000098986	znf1040	100	70.196	ENSDARG00000098087	si:dkey-30f3.2	100	70.196
ENSDARG00000098986	znf1040	99	54.037	ENSDARG00000102027	si:dkey-172k15.11	100	56.693
ENSDARG00000098986	znf1040	100	88.810	ENSDARG00000089814	znf1042	100	88.810
ENSDARG00000098986	znf1040	99	58.711	ENSDARG00000115450	CABZ01012382.1	99	63.007
ENSDARG00000098986	znf1040	99	59.189	ENSDARG00000109381	CU457778.2	99	63.723
ENSDARG00000098986	znf1040	99	69.600	ENSDARG00000102561	AL645691.1	97	58.313
ENSDARG00000098986	znf1040	100	61.905	ENSDARG00000103471	si:dkey-199m13.4	100	64.286
ENSDARG00000098986	znf1040	99	50.411	ENSDARG00000096856	znf1012	100	50.411
ENSDARG00000098986	znf1040	100	72.549	ENSDARG00000110658	zgc:174696	100	72.549
ENSDARG00000098986	znf1040	100	60.952	ENSDARG00000096041	si:ch211-162i8.2	100	63.571
ENSDARG00000098986	znf1040	99	80.761	ENSDARG00000103310	znf1053	99	76.957
ENSDARG00000098986	znf1040	99	51.070	ENSDARG00000075417	zgc:175107	98	51.070
ENSDARG00000098986	znf1040	99	61.098	ENSDARG00000112725	si:dkey-22h13.2	99	62.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000098986	znf1040	79	38.732	ENSCSEG00000011817	-	60	38.732	Cynoglossus_semilaevis
ENSDARG00000098986	znf1040	84	48.507	ENSFHEG00000021020	-	70	48.507	Fundulus_heteroclitus
ENSDARG00000098986	znf1040	80	54.945	ENSGMOG00000020024	-	100	54.945	Gadus_morhua
ENSDARG00000098986	znf1040	80	39.007	ENSGAFG00000013839	-	65	39.161	Gambusia_affinis
ENSDARG00000098986	znf1040	88	39.706	ENSKMAG00000014002	si:ch211-79k12.2	79	39.706	Kryptolebias_marmoratus
ENSDARG00000098986	znf1040	95	39.048	ENSKMAG00000011441	-	94	40.110	Kryptolebias_marmoratus
ENSDARG00000098986	znf1040	99	44.330	ENSORLG00000012434	znf1064	76	44.330	Oryzias_latipes
ENSDARG00000098986	znf1040	96	36.496	ENSORLG00015013828	-	69	36.496	Oryzias_latipes_hsok
ENSDARG00000098986	znf1040	81	39.855	ENSOMEG00000005928	-	54	38.000	Oryzias_melastigma
ENSDARG00000098986	znf1040	80	50.704	ENSPFOG00000022423	-	77	47.390	Poecilia_formosa
ENSDARG00000098986	znf1040	85	45.946	ENSPFOG00000005998	-	63	40.146	Poecilia_formosa
ENSDARG00000098986	znf1040	86	48.824	ENSPFOG00000003366	-	73	46.176	Poecilia_formosa
ENSDARG00000098986	znf1040	82	42.857	ENSPLAG00000010547	-	60	42.857	Poecilia_latipinna
ENSDARG00000098986	znf1040	99	40.306	ENSPLAG00000023537	-	93	40.306	Poecilia_latipinna
ENSDARG00000098986	znf1040	80	50.331	ENSPREG00000005015	-	97	53.043	Poecilia_reticulata
ENSDARG00000098986	znf1040	85	40.127	ENSSPAG00000017203	-	66	39.264	Stegastes_partitus
ENSDARG00000098986	znf1040	83	45.489	ENSXETG00000031310	-	71	45.489	Xenopus_tropicalis
ENSDARG00000098986	znf1040	68	46.798	ENSXCOG00000003499	-	61	46.798	Xiphophorus_couchianus
ENSDARG00000098986	znf1040	97	37.912	ENSXMAG00000024816	-	81	37.912	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function