EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099021 (Gene tree)
Gene ID: 768131
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain%2C bifurcated 1b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 25551 bases
Position: chr16:21891811-21917361
Accession: ZDB-GENE-061013-224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000136505	MBD	PF01429.19	4e-09	1	1
ENSDARP00000140273	MBD	PF01429.19	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000165849	-	838	-	ENSDARP00000140198	279 (aa)	-	A0A0R4IUJ3
ENSDART00000165522	-	811	-	-	- (aa)	-	-
ENSDART00000165824	-	4343	XM_005158016	ENSDARP00000136505	1214 (aa)	XP_005158073	A0A0R4IPA3
ENSDART00000170634	-	3729	XM_005158013	ENSDARP00000140273	1242 (aa)	XP_005158070	A0A0R4IUW4
ENSDART00000171818	-	732	-	ENSDARP00000140486	100 (aa)	-	A0A0R4IT84

Gene Model

Click here to download ENSDARG00000099021's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099021	setdb1b	80	85.714	ENSDARG00000041243	setdb1a	70	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099021	setdb1b	99	56.978	ENSG00000143379	SETDB1	97	55.556	Homo_sapiens
ENSDARG00000099021	setdb1b	55	76.029	ENSAPOG00000016228	setdb1b	98	67.617	Acanthochromis_polyacanthus
ENSDARG00000099021	setdb1b	99	56.268	ENSAMEG00000001160	SETDB1	94	57.157	Ailuropoda_melanoleuca
ENSDARG00000099021	setdb1b	99	71.089	ENSACIG00000007359	setdb1b	99	70.331	Amphilophus_citrinellus
ENSDARG00000099021	setdb1b	99	68.791	ENSAOCG00000005586	setdb1b	99	68.291	Amphiprion_ocellaris
ENSDARG00000099021	setdb1b	93	75.258	ENSAPEG00000007774	setdb1b	99	68.786	Amphiprion_percula
ENSDARG00000099021	setdb1b	99	69.268	ENSATEG00000023520	setdb1b	98	68.996	Anabas_testudineus
ENSDARG00000099021	setdb1b	98	71.508	ENSAPLG00000013908	SETDB1	89	70.787	Anas_platyrhynchos
ENSDARG00000099021	setdb1b	96	72.881	ENSANAG00000001819	SETDB1	94	57.793	Aotus_nancymaae
ENSDARG00000099021	setdb1b	99	69.237	ENSACLG00000020489	setdb1b	100	68.632	Astatotilapia_calliptera
ENSDARG00000099021	setdb1b	63	47.846	ENSAMXG00000010030	setdb1a	57	63.121	Astyanax_mexicanus
ENSDARG00000099021	setdb1b	94	81.366	ENSAMXG00000016168	setdb1b	100	83.369	Astyanax_mexicanus
ENSDARG00000099021	setdb1b	99	56.497	ENSBTAG00000000098	SETDB1	94	58.083	Bos_taurus
ENSDARG00000099021	setdb1b	99	56.575	ENSCJAG00000006972	SETDB1	94	57.859	Callithrix_jacchus
ENSDARG00000099021	setdb1b	99	56.109	ENSCAFG00000023501	SETDB1	91	62.307	Canis_familiaris
ENSDARG00000099021	setdb1b	99	61.333	ENSCAFG00020013596	SETDB1	97	57.626	Canis_lupus_dingo
ENSDARG00000099021	setdb1b	98	72.881	ENSCHIG00000010698	SETDB1	94	58.058	Capra_hircus
ENSDARG00000099021	setdb1b	67	77.404	ENSCAPG00000013619	SETDB1	82	77.404	Cavia_aperea
ENSDARG00000099021	setdb1b	99	56.559	ENSCPOG00000001632	SETDB1	94	57.198	Cavia_porcellus
ENSDARG00000099021	setdb1b	99	61.333	ENSCCAG00000024882	SETDB1	94	58.043	Cebus_capucinus
ENSDARG00000099021	setdb1b	99	55.597	ENSCATG00000044888	SETDB1	94	55.276	Cercocebus_atys
ENSDARG00000099021	setdb1b	99	57.075	ENSCLAG00000000242	SETDB1	96	56.116	Chinchilla_lanigera
ENSDARG00000099021	setdb1b	88	58.515	ENSCSAG00000018034	SETDB1	96	59.713	Chlorocebus_sabaeus
ENSDARG00000099021	setdb1b	95	77.027	ENSCHOG00000004013	SETDB1	84	76.190	Choloepus_hoffmanni
ENSDARG00000099021	setdb1b	97	71.186	ENSCPBG00000008716	SETDB1	88	71.186	Chrysemys_picta_bellii
ENSDARG00000099021	setdb1b	85	66.102	ENSCANG00000036388	SETDB1	87	61.641	Colobus_angolensis_palliatus
ENSDARG00000099021	setdb1b	99	55.224	ENSCGRG00001010822	Setdb1	97	54.421	Cricetulus_griseus_chok1gshd
ENSDARG00000099021	setdb1b	99	55.224	ENSCGRG00000005953	Setdb1	97	54.057	Cricetulus_griseus_crigri
ENSDARG00000099021	setdb1b	99	69.167	ENSCSEG00000002988	setdb1b	99	68.957	Cynoglossus_semilaevis
ENSDARG00000099021	setdb1b	99	69.095	ENSCVAG00000008877	setdb1b	98	69.779	Cyprinodon_variegatus
ENSDARG00000099021	setdb1b	99	56.629	ENSDNOG00000007754	SETDB1	94	57.490	Dasypus_novemcinctus
ENSDARG00000099021	setdb1b	98	72.989	ENSDORG00000006830	Setdb1	87	72.254	Dipodomys_ordii
ENSDARG00000099021	setdb1b	67	46.774	ENSEBUG00000005735	setdb1b	95	43.059	Eptatretus_burgeri
ENSDARG00000099021	setdb1b	99	56.139	ENSEASG00005002061	SETDB1	94	57.488	Equus_asinus_asinus
ENSDARG00000099021	setdb1b	99	55.970	ENSECAG00000023954	SETDB1	94	57.488	Equus_caballus
ENSDARG00000099021	setdb1b	77	65.753	ENSEEUG00000015825	SETDB1	73	66.821	Erinaceus_europaeus
ENSDARG00000099021	setdb1b	100	70.434	ENSELUG00000013948	setdb1b	99	71.833	Esox_lucius
ENSDARG00000099021	setdb1b	81	70.213	ENSELUG00000006204	-	75	70.213	Esox_lucius
ENSDARG00000099021	setdb1b	58	56.681	ENSFCAG00000009655	SETDB1	94	56.311	Felis_catus
ENSDARG00000099021	setdb1b	99	61.333	ENSFDAG00000021515	SETDB1	93	60.714	Fukomys_damarensis
ENSDARG00000099021	setdb1b	99	64.019	ENSGMOG00000005993	setdb1b	99	63.971	Gadus_morhua
ENSDARG00000099021	setdb1b	99	52.856	ENSGALG00000024051	SETDB1	83	66.184	Gallus_gallus
ENSDARG00000099021	setdb1b	93	71.327	ENSGAFG00000012805	setdb1b	98	67.320	Gambusia_affinis
ENSDARG00000099021	setdb1b	100	63.437	ENSGACG00000011675	setdb1b	94	79.167	Gasterosteus_aculeatus
ENSDARG00000099021	setdb1b	99	71.508	ENSGAGG00000005348	SETDB1	88	71.508	Gopherus_agassizii
ENSDARG00000099021	setdb1b	99	56.670	ENSGGOG00000016308	SETDB1	97	55.596	Gorilla_gorilla
ENSDARG00000099021	setdb1b	99	69.396	ENSHBUG00000004618	setdb1b	100	69.738	Haplochromis_burtoni
ENSDARG00000099021	setdb1b	99	61.333	ENSHGLG00000011098	SETDB1	96	57.473	Heterocephalus_glaber_female
ENSDARG00000099021	setdb1b	99	61.333	ENSHGLG00100009789	SETDB1	97	55.831	Heterocephalus_glaber_male
ENSDARG00000099021	setdb1b	99	66.613	ENSHCOG00000014567	setdb1b	98	66.558	Hippocampus_comes
ENSDARG00000099021	setdb1b	100	78.960	ENSIPUG00000004536	setdb1	100	82.424	Ictalurus_punctatus
ENSDARG00000099021	setdb1b	57	65.957	ENSIPUG00000007923	setdb1a	71	65.248	Ictalurus_punctatus
ENSDARG00000099021	setdb1b	52	72.881	ENSSTOG00000006770	SETDB1	94	56.670	Ictidomys_tridecemlineatus
ENSDARG00000099021	setdb1b	99	67.818	ENSKMAG00000001197	setdb1b	98	70.989	Kryptolebias_marmoratus
ENSDARG00000099021	setdb1b	98	67.273	ENSLBEG00000025862	setdb1b	99	69.536	Labrus_bergylta
ENSDARG00000099021	setdb1b	99	72.159	ENSLACG00000011159	SETDB1	94	65.517	Latimeria_chalumnae
ENSDARG00000099021	setdb1b	99	56.215	ENSLAFG00000004006	SETDB1	94	56.952	Loxodonta_africana
ENSDARG00000099021	setdb1b	99	56.801	ENSMFAG00000042328	SETDB1	94	57.763	Macaca_fascicularis
ENSDARG00000099021	setdb1b	96	72.881	ENSMMUG00000023235	SETDB1	91	60.714	Macaca_mulatta
ENSDARG00000099021	setdb1b	99	56.609	ENSMNEG00000017223	SETDB1	94	57.763	Macaca_nemestrina
ENSDARG00000099021	setdb1b	99	56.801	ENSMLEG00000033050	SETDB1	94	57.763	Mandrillus_leucophaeus
ENSDARG00000099021	setdb1b	99	67.823	ENSMAMG00000015176	setdb1b	85	68.269	Mastacembelus_armatus
ENSDARG00000099021	setdb1b	99	69.237	ENSMZEG00005016099	setdb1b	100	68.632	Maylandia_zebra
ENSDARG00000099021	setdb1b	85	58.130	ENSMGAG00000001018	SETDB1	86	57.317	Meleagris_gallopavo
ENSDARG00000099021	setdb1b	83	74.576	ENSMAUG00000021391	Setdb1	87	73.864	Mesocricetus_auratus
ENSDARG00000099021	setdb1b	98	72.881	ENSMICG00000000425	SETDB1	91	60.714	Microcebus_murinus
ENSDARG00000099021	setdb1b	52	73.446	ENSMOCG00000017407	Setdb1	98	60.714	Microtus_ochrogaster
ENSDARG00000099021	setdb1b	99	69.860	ENSMMOG00000016162	setdb1b	99	68.801	Mola_mola
ENSDARG00000099021	setdb1b	97	73.810	ENSMODG00000018821	SETDB1	80	66.316	Monodelphis_domestica
ENSDARG00000099021	setdb1b	100	68.468	ENSMALG00000007801	setdb1b	99	68.076	Monopterus_albus
ENSDARG00000099021	setdb1b	97	73.446	MGP_CAROLIEiJ_G0025342	Setdb1	87	72.727	Mus_caroli
ENSDARG00000099021	setdb1b	97	73.446	ENSMUSG00000015697	Setdb1	87	72.727	Mus_musculus
ENSDARG00000099021	setdb1b	53	66.525	ENSMPUG00000004298	SETDB1	94	54.545	Mustela_putorius_furo
ENSDARG00000099021	setdb1b	53	66.314	ENSMLUG00000010486	SETDB1	91	60.714	Myotis_lucifugus
ENSDARG00000099021	setdb1b	98	72.881	ENSNGAG00000020151	Setdb1	95	60.714	Nannospalax_galili
ENSDARG00000099021	setdb1b	99	71.310	ENSNBRG00000003147	setdb1b	99	71.215	Neolamprologus_brichardi
ENSDARG00000099021	setdb1b	99	57.563	ENSNLEG00000009996	SETDB1	95	56.962	Nomascus_leucogenys
ENSDARG00000099021	setdb1b	84	73.446	ENSMEUG00000006544	-	74	72.159	Notamacropus_eugenii
ENSDARG00000099021	setdb1b	97	72.989	ENSMEUG00000000555	-	87	71.676	Notamacropus_eugenii
ENSDARG00000099021	setdb1b	96	56.268	ENSOPRG00000015349	SETDB1	92	57.388	Ochotona_princeps
ENSDARG00000099021	setdb1b	99	56.376	ENSODEG00000012471	SETDB1	96	56.657	Octodon_degus
ENSDARG00000099021	setdb1b	99	70.617	ENSONIG00000006454	setdb1b	99	71.795	Oreochromis_niloticus
ENSDARG00000099021	setdb1b	98	70.270	ENSOCUG00000003642	SETDB1	88	70.270	Oryctolagus_cuniculus
ENSDARG00000099021	setdb1b	99	69.520	ENSORLG00000010602	setdb1b	100	69.061	Oryzias_latipes
ENSDARG00000099021	setdb1b	73	70.168	ENSORLG00020008638	setdb1b	97	70.852	Oryzias_latipes_hni
ENSDARG00000099021	setdb1b	99	69.237	ENSORLG00015014543	setdb1b	100	68.632	Oryzias_latipes_hsok
ENSDARG00000099021	setdb1b	99	70.720	ENSOMEG00000009457	setdb1b	99	70.847	Oryzias_melastigma
ENSDARG00000099021	setdb1b	98	72.881	ENSOGAG00000010320	SETDB1	91	61.062	Otolemur_garnettii
ENSDARG00000099021	setdb1b	98	72.881	ENSOARG00000020880	SETDB1	94	57.778	Ovis_aries
ENSDARG00000099021	setdb1b	99	56.882	ENSPPAG00000041015	SETDB1	97	55.464	Pan_paniscus
ENSDARG00000099021	setdb1b	99	56.803	ENSPPRG00000005462	SETDB1	94	57.379	Panthera_pardus
ENSDARG00000099021	setdb1b	99	57.170	ENSPTIG00000014233	SETDB1	94	57.936	Panthera_tigris_altaica
ENSDARG00000099021	setdb1b	99	56.689	ENSPTRG00000001267	SETDB1	97	55.515	Pan_troglodytes
ENSDARG00000099021	setdb1b	99	55.224	ENSPANG00000020214	SETDB1	94	54.682	Papio_anubis
ENSDARG00000099021	setdb1b	99	71.113	ENSPKIG00000010963	setdb1b	99	71.610	Paramormyrops_kingsleyae
ENSDARG00000099021	setdb1b	53	58.921	ENSPSIG00000008407	SETDB1	84	58.033	Pelodiscus_sinensis
ENSDARG00000099021	setdb1b	94	57.055	ENSPEMG00000010553	Setdb1	97	57.846	Peromyscus_maniculatus_bairdii
ENSDARG00000099021	setdb1b	98	69.942	ENSPMAG00000001573	setdb1b	92	69.143	Petromyzon_marinus
ENSDARG00000099021	setdb1b	100	69.641	ENSPFOG00000004429	setdb1b	98	71.525	Poecilia_formosa
ENSDARG00000099021	setdb1b	99	65.979	ENSPFOG00000004623	-	95	65.753	Poecilia_formosa
ENSDARG00000099021	setdb1b	99	67.780	ENSPLAG00000019076	-	99	68.735	Poecilia_latipinna
ENSDARG00000099021	setdb1b	96	66.827	ENSPLAG00000017117	setdb1b	98	67.760	Poecilia_latipinna
ENSDARG00000099021	setdb1b	99	67.802	ENSPMEG00000006468	setdb1b	98	69.212	Poecilia_mexicana
ENSDARG00000099021	setdb1b	99	68.093	ENSPREG00000017459	setdb1b	98	69.524	Poecilia_reticulata
ENSDARG00000099021	setdb1b	99	56.801	ENSPPYG00000000887	SETDB1	94	57.611	Pongo_abelii
ENSDARG00000099021	setdb1b	98	72.881	ENSPCOG00000027869	SETDB1	87	72.159	Propithecus_coquereli
ENSDARG00000099021	setdb1b	52	68.966	ENSPVAG00000004355	SETDB1	88	55.400	Pteropus_vampyrus
ENSDARG00000099021	setdb1b	100	68.745	ENSPNYG00000003997	setdb1b	98	68.863	Pundamilia_nyererei
ENSDARG00000099021	setdb1b	95	43.145	ENSPNAG00000003444	setdb1a	63	82.474	Pygocentrus_nattereri
ENSDARG00000099021	setdb1b	100	78.947	ENSPNAG00000021617	setdb1b	100	79.498	Pygocentrus_nattereri
ENSDARG00000099021	setdb1b	97	73.446	ENSRNOG00000021143	Setdb1	87	72.727	Rattus_norvegicus
ENSDARG00000099021	setdb1b	99	57.088	ENSRBIG00000042359	SETDB1	94	57.859	Rhinopithecus_bieti
ENSDARG00000099021	setdb1b	99	57.211	ENSRROG00000032628	SETDB1	94	57.803	Rhinopithecus_roxellana
ENSDARG00000099021	setdb1b	99	57.021	ENSSBOG00000028608	SETDB1	97	55.667	Saimiri_boliviensis_boliviensis
ENSDARG00000099021	setdb1b	99	55.193	ENSSHAG00000012701	SETDB1	89	66.834	Sarcophilus_harrisii
ENSDARG00000099021	setdb1b	99	71.586	ENSSFOG00015022183	setdb1	99	71.821	Scleropages_formosus
ENSDARG00000099021	setdb1b	59	69.721	ENSSMAG00000015398	setdb1b	58	70.238	Scophthalmus_maximus
ENSDARG00000099021	setdb1b	99	69.603	ENSSDUG00000007513	setdb1b	98	69.687	Seriola_dumerili
ENSDARG00000099021	setdb1b	99	53.711	ENSSPUG00000002969	SETDB1	96	57.567	Sphenodon_punctatus
ENSDARG00000099021	setdb1b	92	66.314	ENSSSCG00000006645	SETDB1	96	59.823	Sus_scrofa
ENSDARG00000099021	setdb1b	93	69.061	ENSTGUG00000004684	SETDB1	90	69.061	Taeniopygia_guttata
ENSDARG00000099021	setdb1b	99	67.070	ENSTRUG00000014641	setdb1b	98	67.798	Takifugu_rubripes
ENSDARG00000099021	setdb1b	99	62.317	ENSTNIG00000008065	setdb1b	97	61.941	Tetraodon_nigroviridis
ENSDARG00000099021	setdb1b	52	72.881	ENSTBEG00000009306	SETDB1	89	72.159	Tupaia_belangeri
ENSDARG00000099021	setdb1b	84	61.074	ENSTTRG00000006966	SETDB1	80	62.551	Tursiops_truncatus
ENSDARG00000099021	setdb1b	52	72.881	ENSUAMG00000026724	SETDB1	94	57.582	Ursus_americanus
ENSDARG00000099021	setdb1b	57	54.478	ENSUMAG00000003141	SETDB1	94	54.182	Ursus_maritimus
ENSDARG00000099021	setdb1b	78	58.440	ENSVPAG00000005440	SETDB1	73	59.905	Vicugna_pacos
ENSDARG00000099021	setdb1b	99	55.981	ENSVVUG00000011637	SETDB1	94	57.281	Vulpes_vulpes
ENSDARG00000099021	setdb1b	98	74.011	ENSXETG00000008936	setdb1	87	74.011	Xenopus_tropicalis
ENSDARG00000099021	setdb1b	99	80.412	ENSXCOG00000019497	setdb1b	90	80.412	Xiphophorus_couchianus
ENSDARG00000099021	setdb1b	99	69.020	ENSXMAG00000016600	setdb1b	98	69.114	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0007265	Ras protein signal transduction	-	ISS	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0018024	histone-lysine N-methyltransferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0034968	histone lysine methylation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0090309	positive regulation of methylation-dependent chromatin silencing	-	ISS	Process
GO:1990841	promoter-specific chromatin binding	-	ISS	Function