EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000099201 (Gene tree)
Gene ID: -
Gene Symbol: BX908731.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5205 bases
Position: chr22:17838913-17844117
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133452	RVT_1	PF00078.27	8.3e-52	1	1
ENSDARP00000133452	RNase_H	PF00075.24	4.5e-16	1	1
ENSDARP00000133452	Exo_endo_phos	PF03372.23	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159363	BX908731.1-201	5205	-	ENSDARP00000133452	1253 (aa)	-	A0A0G2KM65

Gene Model

Click here to download ENSDARG00000099201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099201	BX908731.1	100	49.641	ENSDARG00000103436	BX548028.1	99	49.641
ENSDARG00000099201	BX908731.1	100	99.282	ENSDARG00000103037	CR848788.1	100	99.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099201	BX908731.1	99	48.328	ENSAMXG00000043500	-	99	48.328	Astyanax_mexicanus
ENSDARG00000099201	BX908731.1	99	45.288	ENSKMAG00000004415	-	99	45.288	Kryptolebias_marmoratus
ENSDARG00000099201	BX908731.1	99	45.288	ENSKMAG00000003982	-	99	45.288	Kryptolebias_marmoratus
ENSDARG00000099201	BX908731.1	68	47.636	ENSKMAG00000012711	-	100	47.636	Kryptolebias_marmoratus
ENSDARG00000099201	BX908731.1	65	49.630	ENSKMAG00000021014	-	100	49.630	Kryptolebias_marmoratus
ENSDARG00000099201	BX908731.1	100	45.737	ENSORLG00000024423	-	100	45.737	Oryzias_latipes
ENSDARG00000099201	BX908731.1	100	45.939	ENSORLG00000023592	-	100	45.939	Oryzias_latipes
ENSDARG00000099201	BX908731.1	100	45.939	ENSORLG00000027174	-	100	45.939	Oryzias_latipes
ENSDARG00000099201	BX908731.1	100	45.939	ENSORLG00000026314	-	100	45.939	Oryzias_latipes
ENSDARG00000099201	BX908731.1	100	46.056	ENSORLG00020018543	-	100	46.056	Oryzias_latipes_hni
ENSDARG00000099201	BX908731.1	71	46.361	ENSORLG00020019901	-	100	46.361	Oryzias_latipes_hni
ENSDARG00000099201	BX908731.1	100	46.056	ENSORLG00020020238	-	100	46.056	Oryzias_latipes_hni
ENSDARG00000099201	BX908731.1	100	46.135	ENSORLG00020011427	-	100	46.135	Oryzias_latipes_hni
ENSDARG00000099201	BX908731.1	88	46.770	ENSORLG00015013792	-	99	46.770	Oryzias_latipes_hsok
ENSDARG00000099201	BX908731.1	85	47.806	ENSOMEG00000003836	-	98	47.806	Oryzias_melastigma
ENSDARG00000099201	BX908731.1	99	47.871	ENSPKIG00000019189	-	99	47.871	Paramormyrops_kingsleyae
ENSDARG00000099201	BX908731.1	87	47.373	ENSXMAG00000026248	-	96	47.373	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	99	47.194	ENSXMAG00000021755	-	99	47.604	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	63	48.350	ENSXMAG00000023377	-	100	48.350	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	82	43.665	ENSXMAG00000023078	-	99	43.665	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	64	46.517	ENSXMAG00000023126	-	100	46.517	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	99	46.877	ENSXMAG00000028309	-	99	47.284	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	92	53.541	ENSXMAG00000029466	-	100	53.541	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	99	47.194	ENSXMAG00000021070	-	99	47.604	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	99	46.363	ENSXMAG00000021061	-	99	46.363	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	69	46.998	ENSXMAG00000020874	-	95	46.998	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	71	55.107	ENSXMAG00000024143	-	100	55.107	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	87	47.373	ENSXMAG00000022223	-	96	47.373	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	82	43.860	ENSXMAG00000027130	-	99	43.860	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	82	43.567	ENSXMAG00000029923	-	99	43.567	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	87	47.373	ENSXMAG00000026588	-	96	47.373	Xiphophorus_maculatus
ENSDARG00000099201	BX908731.1	60	42.536	ENSXMAG00000025430	-	99	42.536	Xiphophorus_maculatus