EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000099245 (Gene tree)
Gene ID: 100330167
Gene Symbol: CABZ01081752.1
Alias: -
Full Name: gastrula zinc finger protein XlCGF8.2DB-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12175 bases
Position: chrKN150703.1:23110-35284
Accession: 100330167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	1	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	2	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	3	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	4	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	5	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	6	7
ENSDARP00000137347	zf-C2H2	PF00096.26	3.5e-42	7	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	1	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	2	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	3	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	4	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	5	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	6	7
ENSDARP00000151796	zf-C2H2	PF00096.26	3.5e-42	7	7
ENSDARP00000137347	zf-met	PF12874.7	4.2e-09	1	1
ENSDARP00000151796	zf-met	PF12874.7	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000168391	CABZ01081752.1-202	3185	-	ENSDARP00000137347	325 (aa)	XP_005174611	H9GXI3
ENSDART00000183653	CABZ01081752.1-201	3352	-	ENSDARP00000151796	325 (aa)	XP_005174611	H9GXI3

Gene Model

Click here to download ENSDARG00000099245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099245	CABZ01081752.1	94	42.295	ENSDARG00000101365	si:cabz01021430.2	100	56.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099245	CABZ01081752.1	69	59.615	ENSPFOG00000005998	-	67	58.491	Poecilia_formosa
ENSDARG00000099245	CABZ01081752.1	70	47.059	ENSSPAG00000017203	-	70	33.333	Stegastes_partitus