EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099396 (Gene tree)
Gene ID: 100537153
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2919 bases
Position: chr7:74141297-74144215
Accession: ZDB-GENE-161017-145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000140207	RRM_1	PF00076.22	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164992	-	483	XM_003199030	ENSDARP00000140207	160 (aa)	XP_003199078	E7F9Q3

Gene Model

Click here to download ENSDARG00000099396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099396	rbpms	100	58.757	ENSDARG00000045930	rbpms2a	89	59.887
ENSDARG00000099396	rbpms	100	59.551	ENSDARG00000079578	rbpms2b	70	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099396	rbpms	100	67.647	ENSG00000157110	RBPMS	97	60.000	Homo_sapiens
ENSDARG00000099396	rbpms	100	71.598	ENSAPOG00000022304	RBPMS	87	71.598	Acanthochromis_polyacanthus
ENSDARG00000099396	rbpms	88	68.667	ENSAMEG00000001522	RBPMS	68	68.667	Ailuropoda_melanoleuca
ENSDARG00000099396	rbpms	68	71.681	ENSACIG00000011395	RBPMS	61	71.681	Amphilophus_citrinellus
ENSDARG00000099396	rbpms	100	71.598	ENSAOCG00000007731	RBPMS	87	71.598	Amphiprion_ocellaris
ENSDARG00000099396	rbpms	100	71.598	ENSAPEG00000023543	RBPMS	87	71.598	Amphiprion_percula
ENSDARG00000099396	rbpms	100	71.598	ENSATEG00000018184	RBPMS	87	71.598	Anabas_testudineus
ENSDARG00000099396	rbpms	100	66.667	ENSACAG00000003012	RBPMS	87	66.667	Anolis_carolinensis
ENSDARG00000099396	rbpms	100	67.647	ENSANAG00000028150	RBPMS	87	67.647	Aotus_nancymaae
ENSDARG00000099396	rbpms	100	71.598	ENSACLG00000002926	RBPMS	87	71.598	Astatotilapia_calliptera
ENSDARG00000099396	rbpms	100	70.414	ENSAMXG00000033491	rbpms	87	70.414	Astyanax_mexicanus
ENSDARG00000099396	rbpms	100	68.235	ENSBTAG00000033727	RBPMS	68	69.333	Bos_taurus
ENSDARG00000099396	rbpms	100	67.647	ENSCJAG00000012366	RBPMS	87	67.647	Callithrix_jacchus
ENSDARG00000099396	rbpms	88	68.667	ENSCAFG00000006503	RBPMS	68	68.667	Canis_familiaris
ENSDARG00000099396	rbpms	88	68.667	ENSCAFG00020001031	RBPMS	68	68.667	Canis_lupus_dingo
ENSDARG00000099396	rbpms	100	60.920	ENSCHIG00000027156	RBPMS	87	60.920	Capra_hircus
ENSDARG00000099396	rbpms	51	87.654	ENSTSYG00000013982	RBPMS	61	87.654	Carlito_syrichta
ENSDARG00000099396	rbpms	100	67.647	ENSCPOG00000038597	RBPMS	87	67.647	Cavia_porcellus
ENSDARG00000099396	rbpms	100	67.647	ENSCCAG00000033226	RBPMS	87	67.647	Cebus_capucinus
ENSDARG00000099396	rbpms	100	67.647	ENSCATG00000036486	RBPMS	87	67.647	Cercocebus_atys
ENSDARG00000099396	rbpms	100	67.647	ENSCLAG00000001518	RBPMS	98	67.647	Chinchilla_lanigera
ENSDARG00000099396	rbpms	88	68.667	ENSCSAG00000015838	RBPMS	68	68.667	Chlorocebus_sabaeus
ENSDARG00000099396	rbpms	88	68.667	ENSCHOG00000008745	RBPMS	76	68.667	Choloepus_hoffmanni
ENSDARG00000099396	rbpms	100	67.647	ENSCPBG00000013437	RBPMS	87	67.647	Chrysemys_picta_bellii
ENSDARG00000099396	rbpms	100	67.647	ENSCANG00000034997	RBPMS	98	67.647	Colobus_angolensis_palliatus
ENSDARG00000099396	rbpms	100	64.912	ENSCGRG00001002814	Rbpms	87	67.251	Cricetulus_griseus_chok1gshd
ENSDARG00000099396	rbpms	100	64.912	ENSCGRG00000006095	Rbpms	98	67.251	Cricetulus_griseus_crigri
ENSDARG00000099396	rbpms	100	71.598	ENSCSEG00000002777	rbpms	93	71.598	Cynoglossus_semilaevis
ENSDARG00000099396	rbpms	100	71.598	ENSCVAG00000013975	RBPMS	87	71.598	Cyprinodon_variegatus
ENSDARG00000099396	rbpms	88	68.667	ENSDNOG00000008126	RBPMS	68	68.667	Dasypus_novemcinctus
ENSDARG00000099396	rbpms	88	69.333	ENSETEG00000017582	RBPMS	68	69.333	Echinops_telfairi
ENSDARG00000099396	rbpms	88	68.667	ENSEASG00005016962	RBPMS	76	68.667	Equus_asinus_asinus
ENSDARG00000099396	rbpms	88	68.667	ENSECAG00000020735	RBPMS	76	68.667	Equus_caballus
ENSDARG00000099396	rbpms	100	73.373	ENSELUG00000009787	rbpms	87	73.373	Esox_lucius
ENSDARG00000099396	rbpms	100	45.399	ENSFCAG00000022292	-	78	45.399	Felis_catus
ENSDARG00000099396	rbpms	100	67.647	ENSFCAG00000025639	-	87	67.647	Felis_catus
ENSDARG00000099396	rbpms	100	67.647	ENSFDAG00000012078	RBPMS	98	67.647	Fukomys_damarensis
ENSDARG00000099396	rbpms	100	71.598	ENSFHEG00000000618	rbpms	87	71.598	Fundulus_heteroclitus
ENSDARG00000099396	rbpms	75	49.600	ENSGMOG00000009646	-	83	49.600	Gadus_morhua
ENSDARG00000099396	rbpms	100	71.598	ENSGAFG00000016566	RBPMS	87	71.598	Gambusia_affinis
ENSDARG00000099396	rbpms	100	66.667	ENSGACG00000019471	rbpms	87	66.667	Gasterosteus_aculeatus
ENSDARG00000099396	rbpms	100	71.598	ENSHBUG00000005888	RBPMS	87	71.598	Haplochromis_burtoni
ENSDARG00000099396	rbpms	100	67.647	ENSHGLG00000002303	RBPMS	87	67.647	Heterocephalus_glaber_female
ENSDARG00000099396	rbpms	100	67.647	ENSHGLG00100008787	RBPMS	98	67.647	Heterocephalus_glaber_male
ENSDARG00000099396	rbpms	100	71.006	ENSHCOG00000005774	rbpms	88	71.006	Hippocampus_comes
ENSDARG00000099396	rbpms	100	71.006	ENSIPUG00000012459	RBPMS	88	71.006	Ictalurus_punctatus
ENSDARG00000099396	rbpms	100	67.647	ENSSTOG00000026546	RBPMS	87	67.647	Ictidomys_tridecemlineatus
ENSDARG00000099396	rbpms	100	68.235	ENSJJAG00000014024	Rbpms	87	68.235	Jaculus_jaculus
ENSDARG00000099396	rbpms	100	59.172	ENSKMAG00000006377	RBPMS	86	61.078	Kryptolebias_marmoratus
ENSDARG00000099396	rbpms	100	71.006	ENSLBEG00000027989	RBPMS	95	71.006	Labrus_bergylta
ENSDARG00000099396	rbpms	100	69.412	ENSLOCG00000013199	RBPMS	93	69.412	Lepisosteus_oculatus
ENSDARG00000099396	rbpms	88	68.667	ENSLAFG00000000209	RBPMS	68	68.667	Loxodonta_africana
ENSDARG00000099396	rbpms	100	67.647	ENSMFAG00000036911	RBPMS	87	67.647	Macaca_fascicularis
ENSDARG00000099396	rbpms	100	67.647	ENSMMUG00000000458	RBPMS	87	67.647	Macaca_mulatta
ENSDARG00000099396	rbpms	100	67.647	ENSMNEG00000043805	RBPMS	87	67.647	Macaca_nemestrina
ENSDARG00000099396	rbpms	100	67.647	ENSMLEG00000015635	RBPMS	98	67.647	Mandrillus_leucophaeus
ENSDARG00000099396	rbpms	51	88.889	ENSMAMG00000004604	RBPMS	55	73.585	Mastacembelus_armatus
ENSDARG00000099396	rbpms	100	71.598	ENSMZEG00005000698	RBPMS	94	71.598	Maylandia_zebra
ENSDARG00000099396	rbpms	100	67.647	ENSMGAG00000005088	RBPMS	87	67.647	Meleagris_gallopavo
ENSDARG00000099396	rbpms	100	64.912	ENSMAUG00000018892	Rbpms	87	67.251	Mesocricetus_auratus
ENSDARG00000099396	rbpms	100	66.471	ENSMICG00000001295	RBPMS	87	67.647	Microcebus_murinus
ENSDARG00000099396	rbpms	100	64.912	ENSMOCG00000014009	Rbpms	87	67.251	Microtus_ochrogaster
ENSDARG00000099396	rbpms	91	69.481	ENSMMOG00000012036	RBPMS	65	69.481	Mola_mola
ENSDARG00000099396	rbpms	100	68.235	ENSMODG00000019006	RBPMS	80	68.235	Monodelphis_domestica
ENSDARG00000099396	rbpms	100	69.822	ENSMALG00000003261	RBPMS	90	69.822	Monopterus_albus
ENSDARG00000099396	rbpms	100	64.327	MGP_CAROLIEiJ_G0030970	Rbpms	87	66.667	Mus_caroli
ENSDARG00000099396	rbpms	100	64.327	ENSMUSG00000031586	Rbpms	85	73.333	Mus_musculus
ENSDARG00000099396	rbpms	100	64.327	MGP_PahariEiJ_G0021439	Rbpms	87	66.667	Mus_pahari
ENSDARG00000099396	rbpms	100	64.327	MGP_SPRETEiJ_G0032087	Rbpms	87	66.667	Mus_spretus
ENSDARG00000099396	rbpms	88	68.667	ENSMPUG00000011314	RBPMS	68	68.667	Mustela_putorius_furo
ENSDARG00000099396	rbpms	100	67.647	ENSMLUG00000009391	RBPMS	84	73.485	Myotis_lucifugus
ENSDARG00000099396	rbpms	88	68.667	ENSNGAG00000011141	Rbpms	68	68.667	Nannospalax_galili
ENSDARG00000099396	rbpms	100	71.598	ENSNBRG00000003313	RBPMS	94	71.598	Neolamprologus_brichardi
ENSDARG00000099396	rbpms	100	67.647	ENSNLEG00000036183	-	87	67.647	Nomascus_leucogenys
ENSDARG00000099396	rbpms	100	67.647	ENSODEG00000006700	RBPMS	87	67.647	Octodon_degus
ENSDARG00000099396	rbpms	100	71.598	ENSONIG00000007546	RBPMS	97	71.598	Oreochromis_niloticus
ENSDARG00000099396	rbpms	88	68.667	ENSOCUG00000008572	RBPMS	68	68.667	Oryctolagus_cuniculus
ENSDARG00000099396	rbpms	100	71.006	ENSORLG00000004135	-	87	71.006	Oryzias_latipes
ENSDARG00000099396	rbpms	100	71.006	ENSORLG00020016179	RBPMS	87	71.006	Oryzias_latipes_hni
ENSDARG00000099396	rbpms	100	71.006	ENSORLG00015013770	RBPMS	87	71.006	Oryzias_latipes_hsok
ENSDARG00000099396	rbpms	100	71.598	ENSOMEG00000005044	RBPMS	88	71.598	Oryzias_melastigma
ENSDARG00000099396	rbpms	96	64.072	ENSOGAG00000030298	RBPMS	75	64.072	Otolemur_garnettii
ENSDARG00000099396	rbpms	64	72.897	ENSOARG00000010366	RBPMS	75	72.897	Ovis_aries
ENSDARG00000099396	rbpms	100	67.647	ENSPPAG00000033108	RBPMS	98	67.647	Pan_paniscus
ENSDARG00000099396	rbpms	100	67.647	ENSPPRG00000004836	RBPMS	87	67.647	Panthera_pardus
ENSDARG00000099396	rbpms	100	67.647	ENSPTIG00000015964	RBPMS	87	67.647	Panthera_tigris_altaica
ENSDARG00000099396	rbpms	100	67.647	ENSPTRG00000020135	RBPMS	87	67.647	Pan_troglodytes
ENSDARG00000099396	rbpms	100	67.647	ENSPANG00000008143	RBPMS	87	67.647	Papio_anubis
ENSDARG00000099396	rbpms	100	69.822	ENSPKIG00000004836	rbpms	89	69.822	Paramormyrops_kingsleyae
ENSDARG00000099396	rbpms	100	69.822	ENSPKIG00000000535	-	90	69.822	Paramormyrops_kingsleyae
ENSDARG00000099396	rbpms	100	68.235	ENSPSIG00000006136	RBPMS	97	68.235	Pelodiscus_sinensis
ENSDARG00000099396	rbpms	89	70.199	ENSPMGG00000018012	RBPMS	71	70.199	Periophthalmus_magnuspinnatus
ENSDARG00000099396	rbpms	100	65.116	ENSPEMG00000021130	Rbpms	87	67.442	Peromyscus_maniculatus_bairdii
ENSDARG00000099396	rbpms	100	68.235	ENSPCIG00000019298	-	69	65.269	Phascolarctos_cinereus
ENSDARG00000099396	rbpms	100	71.598	ENSPFOG00000017158	RBPMS	87	71.598	Poecilia_formosa
ENSDARG00000099396	rbpms	100	71.598	ENSPLAG00000010767	RBPMS	87	71.598	Poecilia_latipinna
ENSDARG00000099396	rbpms	100	71.598	ENSPMEG00000009788	RBPMS	87	71.598	Poecilia_mexicana
ENSDARG00000099396	rbpms	100	71.598	ENSPREG00000016959	RBPMS	87	71.598	Poecilia_reticulata
ENSDARG00000099396	rbpms	88	68.667	ENSPPYG00000018487	RBPMS	65	71.818	Pongo_abelii
ENSDARG00000099396	rbpms	63	73.585	ENSPCAG00000013493	-	96	73.585	Procavia_capensis
ENSDARG00000099396	rbpms	78	62.687	ENSPCOG00000015948	RBPMS	75	63.846	Propithecus_coquereli
ENSDARG00000099396	rbpms	88	68.667	ENSPVAG00000001661	RBPMS	68	68.667	Pteropus_vampyrus
ENSDARG00000099396	rbpms	100	71.598	ENSPNYG00000001172	RBPMS	94	71.598	Pundamilia_nyererei
ENSDARG00000099396	rbpms	100	71.006	ENSPNAG00000029160	RBPMS	87	71.006	Pygocentrus_nattereri
ENSDARG00000099396	rbpms	91	64.103	ENSRNOG00000013328	Rbpms	75	66.667	Rattus_norvegicus
ENSDARG00000099396	rbpms	100	67.647	ENSRBIG00000038218	RBPMS	98	67.647	Rhinopithecus_bieti
ENSDARG00000099396	rbpms	100	67.647	ENSRROG00000042518	RBPMS	87	67.647	Rhinopithecus_roxellana
ENSDARG00000099396	rbpms	100	67.647	ENSSBOG00000026670	RBPMS	87	67.647	Saimiri_boliviensis_boliviensis
ENSDARG00000099396	rbpms	100	67.647	ENSSHAG00000010114	RBPMS	88	67.647	Sarcophilus_harrisii
ENSDARG00000099396	rbpms	100	69.231	ENSSFOG00015017481	-	89	69.231	Scleropages_formosus
ENSDARG00000099396	rbpms	100	69.822	ENSSFOG00015000417	rbpms	87	69.822	Scleropages_formosus
ENSDARG00000099396	rbpms	100	71.598	ENSSMAG00000010871	rbpms	87	71.598	Scophthalmus_maximus
ENSDARG00000099396	rbpms	100	71.598	ENSSDUG00000010894	RBPMS	88	71.598	Seriola_dumerili
ENSDARG00000099396	rbpms	100	71.598	ENSSLDG00000012916	RBPMS	87	71.598	Seriola_lalandi_dorsalis
ENSDARG00000099396	rbpms	88	66.000	ENSSARG00000000274	RBPMS	68	66.000	Sorex_araneus
ENSDARG00000099396	rbpms	100	67.647	ENSSPUG00000017525	RBPMS	65	67.647	Sphenodon_punctatus
ENSDARG00000099396	rbpms	100	58.788	ENSSPAG00000004777	rbpms	86	58.788	Stegastes_partitus
ENSDARG00000099396	rbpms	100	67.647	ENSSSCG00000015846	RBPMS	87	67.647	Sus_scrofa
ENSDARG00000099396	rbpms	100	68.235	ENSTGUG00000001776	RBPMS	89	68.235	Taeniopygia_guttata
ENSDARG00000099396	rbpms	100	72.189	ENSTRUG00000000041	RBPMS	87	72.189	Takifugu_rubripes
ENSDARG00000099396	rbpms	88	68.456	ENSTTRG00000012451	RBPMS	68	68.456	Tursiops_truncatus
ENSDARG00000099396	rbpms	66	70.909	ENSUAMG00000026353	RBPMS	72	70.909	Ursus_americanus
ENSDARG00000099396	rbpms	92	66.879	ENSUMAG00000007347	RBPMS	73	68.667	Ursus_maritimus
ENSDARG00000099396	rbpms	88	68.667	ENSVPAG00000010991	RBPMS	76	68.667	Vicugna_pacos
ENSDARG00000099396	rbpms	100	67.647	ENSVVUG00000019770	RBPMS	87	67.647	Vulpes_vulpes
ENSDARG00000099396	rbpms	100	66.471	ENSXETG00000011290	rbpms	98	66.471	Xenopus_tropicalis
ENSDARG00000099396	rbpms	100	65.089	ENSXCOG00000002436	RBPMS	87	65.089	Xiphophorus_couchianus
ENSDARG00000099396	rbpms	100	71.598	ENSXMAG00000027637	RBPMS	87	71.598	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0030218	erythrocyte differentiation	28017375.	IMP	Process