EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000099418 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01030017.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4717 bases
Position: chrKN150259.1:45362-50078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131953	RVT_1	PF00078.27	1.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000162307	CABZ01030017.1-201	4717	-	ENSDARP00000131953	1087 (aa)	-	A0A0G2KI12

Gene Model

Click here to download ENSDARG00000099418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099418	CABZ01030017.1	90	41.929	ENSDARG00000112132	BX470182.1	84	41.929
ENSDARG00000099418	CABZ01030017.1	80	31.370	ENSDARG00000103976	BX544877.1	69	31.370
ENSDARG00000099418	CABZ01030017.1	80	30.347	ENSDARG00000105157	BX649434.3	65	30.347
ENSDARG00000099418	CABZ01030017.1	80	30.440	ENSDARG00000100303	CU638714.1	66	30.440
ENSDARG00000099418	CABZ01030017.1	80	30.717	ENSDARG00000105300	BX927081.1	69	30.717
ENSDARG00000099418	CABZ01030017.1	99	41.835	ENSDARG00000088493	si:ch211-149k12.3	86	41.835
ENSDARG00000099418	CABZ01030017.1	76	37.515	ENSDARG00000103562	CU462878.2	94	37.515
ENSDARG00000099418	CABZ01030017.1	80	31.328	ENSDARG00000103841	CU024870.1	70	31.328
ENSDARG00000099418	CABZ01030017.1	57	44.071	ENSDARG00000086420	CABZ01046949.1	78	44.071
ENSDARG00000099418	CABZ01030017.1	92	30.253	ENSDARG00000100925	CU104709.1	79	30.253
ENSDARG00000099418	CABZ01030017.1	99	47.470	ENSDARG00000100065	CU467837.1	85	47.470
ENSDARG00000099418	CABZ01030017.1	53	31.088	ENSDARG00000086849	si:dkey-187k19.2	99	31.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099418	CABZ01030017.1	93	36.471	ENSAPEG00000000638	-	69	36.471	Amphiprion_percula
ENSDARG00000099418	CABZ01030017.1	68	37.399	ENSAPEG00000013789	-	99	37.399	Amphiprion_percula
ENSDARG00000099418	CABZ01030017.1	99	42.177	ENSKMAG00000020455	-	86	42.177	Kryptolebias_marmoratus
ENSDARG00000099418	CABZ01030017.1	81	43.133	ENSKMAG00000020777	-	100	43.133	Kryptolebias_marmoratus
ENSDARG00000099418	CABZ01030017.1	52	38.636	ENSORLG00020005447	-	98	38.636	Oryzias_latipes_hni
ENSDARG00000099418	CABZ01030017.1	51	36.331	ENSPNAG00000027547	-	100	36.331	Pygocentrus_nattereri
ENSDARG00000099418	CABZ01030017.1	79	35.649	ENSXETG00000031887	-	61	35.649	Xenopus_tropicalis
ENSDARG00000099418	CABZ01030017.1	66	30.345	ENSXETG00000034336	-	89	30.345	Xenopus_tropicalis
ENSDARG00000099418	CABZ01030017.1	69	33.333	ENSXETG00000031859	-	72	33.333	Xenopus_tropicalis
ENSDARG00000099418	CABZ01030017.1	99	30.699	ENSXETG00000030359	-	80	30.699	Xenopus_tropicalis
ENSDARG00000099418	CABZ01030017.1	78	37.616	ENSXMAG00000028904	-	84	37.616	Xiphophorus_maculatus