EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099528 (Gene tree)
Gene ID: 393647
Gene Symbol: dus3l
Alias: zgc:63779
Full Name: dihydrouridine synthase 3-like (S. cerevisiae)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11734 bases
Position: chr19:420350-432083
Accession: ZDB-GENE-040426-1260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000134766	Dus	PF01207.17	7.9e-57	1	1
ENSDARP00000136602	Dus	PF01207.17	1.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000164905	-	950	-	ENSDARP00000136602	224 (aa)	-	A0A0R4IQ00
ENSDART00000165371	-	2239	-	ENSDARP00000134766	660 (aa)	-	A0A0R4IIP1

Gene Model

Click here to download ENSDARG00000099528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099528	dus3l	100	81.250	ENSG00000141994	DUS3L	99	73.267	Homo_sapiens
ENSDARG00000099528	dus3l	100	88.839	ENSAPOG00000016764	dus3l	98	65.658	Acanthochromis_polyacanthus
ENSDARG00000099528	dus3l	100	78.125	ENSAMEG00000012423	-	98	59.016	Ailuropoda_melanoleuca
ENSDARG00000099528	dus3l	100	88.839	ENSAOCG00000004343	dus3l	98	65.809	Amphiprion_ocellaris
ENSDARG00000099528	dus3l	100	88.393	ENSAPEG00000005828	dus3l	98	78.718	Amphiprion_percula
ENSDARG00000099528	dus3l	100	86.161	ENSATEG00000011064	dus3l	89	86.631	Anabas_testudineus
ENSDARG00000099528	dus3l	100	79.464	ENSAPLG00000004636	-	100	57.553	Anas_platyrhynchos
ENSDARG00000099528	dus3l	100	55.804	ENSACAG00000012955	-	89	44.088	Anolis_carolinensis
ENSDARG00000099528	dus3l	100	80.357	ENSANAG00000021997	DUS3L	88	79.832	Aotus_nancymaae
ENSDARG00000099528	dus3l	100	87.946	ENSACLG00000011576	dus3l	98	64.157	Astatotilapia_calliptera
ENSDARG00000099528	dus3l	76	83.041	ENSAMXG00000043269	dus3l	97	52.774	Astyanax_mexicanus
ENSDARG00000099528	dus3l	100	79.911	ENSBTAG00000011842	DUS3L	98	59.911	Bos_taurus
ENSDARG00000099528	dus3l	98	59.821	WBGene00021377	Y37E11B.5	88	58.857	Caenorhabditis_elegans
ENSDARG00000099528	dus3l	100	80.804	ENSCJAG00000016997	DUS3L	99	73.515	Callithrix_jacchus
ENSDARG00000099528	dus3l	100	79.911	ENSCAFG00000018762	DUS3L	98	60.060	Canis_familiaris
ENSDARG00000099528	dus3l	100	79.911	ENSCAFG00020018976	-	98	60.060	Canis_lupus_dingo
ENSDARG00000099528	dus3l	100	80.357	ENSCHIG00000021327	-	98	60.207	Capra_hircus
ENSDARG00000099528	dus3l	97	74.654	ENSCAPG00000012525	DUS3L	100	56.811	Cavia_aperea
ENSDARG00000099528	dus3l	100	81.250	ENSCPOG00000021236	DUS3L	97	75.123	Cavia_porcellus
ENSDARG00000099528	dus3l	100	80.804	ENSCCAG00000036889	DUS3L	99	73.333	Cebus_capucinus
ENSDARG00000099528	dus3l	100	81.250	ENSCATG00000040809	DUS3L	99	73.515	Cercocebus_atys
ENSDARG00000099528	dus3l	100	80.804	ENSCLAG00000008470	DUS3L	98	60.805	Chinchilla_lanigera
ENSDARG00000099528	dus3l	100	81.250	ENSCSAG00000009883	DUS3L	98	59.471	Chlorocebus_sabaeus
ENSDARG00000099528	dus3l	100	79.911	ENSCPBG00000011136	-	98	58.752	Chrysemys_picta_bellii
ENSDARG00000099528	dus3l	99	68.750	ENSCING00000004940	zf(c3h)-5	99	49.849	Ciona_intestinalis
ENSDARG00000099528	dus3l	100	69.778	ENSCSAVG00000000525	-	100	53.356	Ciona_savignyi
ENSDARG00000099528	dus3l	100	81.250	ENSCANG00000036677	DUS3L	99	73.515	Colobus_angolensis_palliatus
ENSDARG00000099528	dus3l	100	79.018	ENSCGRG00001023361	Dus3l	98	59.704	Cricetulus_griseus_chok1gshd
ENSDARG00000099528	dus3l	100	79.018	ENSCGRG00000005214	Dus3l	98	59.704	Cricetulus_griseus_crigri
ENSDARG00000099528	dus3l	100	87.054	ENSCSEG00000014994	dus3l	99	64.885	Cynoglossus_semilaevis
ENSDARG00000099528	dus3l	91	86.207	ENSCVAG00000007874	dus3l	97	80.214	Cyprinodon_variegatus
ENSDARG00000099528	dus3l	71	50.936	ENSDNOG00000048551	-	91	50.615	Dasypus_novemcinctus
ENSDARG00000099528	dus3l	100	83.482	ENSDORG00000006754	Dus3l	87	82.386	Dipodomys_ordii
ENSDARG00000099528	dus3l	98	57.658	FBgn0032819	CG10463	99	44.613	Drosophila_melanogaster
ENSDARG00000099528	dus3l	58	77.586	ENSETEG00000004749	-	55	77.586	Echinops_telfairi
ENSDARG00000099528	dus3l	100	75.893	ENSEBUG00000010532	dus3l	81	57.073	Eptatretus_burgeri
ENSDARG00000099528	dus3l	69	87.500	ENSEASG00005023094	-	92	87.500	Equus_asinus_asinus
ENSDARG00000099528	dus3l	100	77.679	ENSECAG00000019359	-	98	57.453	Equus_caballus
ENSDARG00000099528	dus3l	100	87.946	ENSELUG00000015033	dus3l	92	88.372	Esox_lucius
ENSDARG00000099528	dus3l	100	79.911	ENSFCAG00000027534	-	97	73.804	Felis_catus
ENSDARG00000099528	dus3l	100	78.761	ENSFALG00000001343	-	99	60.837	Ficedula_albicollis
ENSDARG00000099528	dus3l	83	83.422	ENSFDAG00000014182	DUS3L	92	69.705	Fukomys_damarensis
ENSDARG00000099528	dus3l	100	86.607	ENSFHEG00000010091	dus3l	97	65.964	Fundulus_heteroclitus
ENSDARG00000099528	dus3l	100	84.375	ENSGMOG00000011366	dus3l	97	87.097	Gadus_morhua
ENSDARG00000099528	dus3l	100	80.804	ENSGALG00000001800	-	99	58.512	Gallus_gallus
ENSDARG00000099528	dus3l	100	87.500	ENSGAFG00000008857	dus3l	98	66.114	Gambusia_affinis
ENSDARG00000099528	dus3l	100	87.500	ENSGACG00000004109	dus3l	99	67.683	Gasterosteus_aculeatus
ENSDARG00000099528	dus3l	100	80.357	ENSGAGG00000005527	-	99	62.248	Gopherus_agassizii
ENSDARG00000099528	dus3l	83	83.422	ENSGGOG00000027433	DUS3L	99	66.832	Gorilla_gorilla
ENSDARG00000099528	dus3l	100	87.946	ENSHBUG00000022232	dus3l	98	63.855	Haplochromis_burtoni
ENSDARG00000099528	dus3l	100	80.357	ENSHGLG00000013475	DUS3L	98	59.911	Heterocephalus_glaber_female
ENSDARG00000099528	dus3l	100	80.804	ENSHGLG00100007077	DUS3L	98	60.060	Heterocephalus_glaber_male
ENSDARG00000099528	dus3l	100	85.268	ENSHCOG00000016072	dus3l	97	64.024	Hippocampus_comes
ENSDARG00000099528	dus3l	100	91.518	ENSIPUG00000004025	dus3l	98	70.000	Ictalurus_punctatus
ENSDARG00000099528	dus3l	100	79.911	ENSSTOG00000025017	DUS3L	98	60.741	Ictidomys_tridecemlineatus
ENSDARG00000099528	dus3l	100	79.464	ENSJJAG00000023742	Dus3l	98	59.520	Jaculus_jaculus
ENSDARG00000099528	dus3l	100	88.839	ENSKMAG00000009675	dus3l	98	66.214	Kryptolebias_marmoratus
ENSDARG00000099528	dus3l	100	88.393	ENSLBEG00000015795	dus3l	93	88.889	Labrus_bergylta
ENSDARG00000099528	dus3l	100	80.357	ENSLACG00000001204	dus3l	97	60.411	Latimeria_chalumnae
ENSDARG00000099528	dus3l	100	86.161	ENSLOCG00000010531	dus3l	98	64.912	Lepisosteus_oculatus
ENSDARG00000099528	dus3l	100	79.018	ENSLAFG00000027552	-	98	59.618	Loxodonta_africana
ENSDARG00000099528	dus3l	100	81.250	ENSMFAG00000031910	DUS3L	99	73.515	Macaca_fascicularis
ENSDARG00000099528	dus3l	100	81.250	ENSMMUG00000031027	DUS3L	99	73.515	Macaca_mulatta
ENSDARG00000099528	dus3l	100	80.804	ENSMNEG00000036509	DUS3L	97	79.736	Macaca_nemestrina
ENSDARG00000099528	dus3l	100	81.250	ENSMLEG00000043222	DUS3L	99	73.515	Mandrillus_leucophaeus
ENSDARG00000099528	dus3l	100	88.839	ENSMAMG00000015637	dus3l	98	66.516	Mastacembelus_armatus
ENSDARG00000099528	dus3l	100	87.946	ENSMZEG00005026661	dus3l	98	64.006	Maylandia_zebra
ENSDARG00000099528	dus3l	100	80.357	ENSMGAG00000001547	-	100	60.720	Meleagris_gallopavo
ENSDARG00000099528	dus3l	100	79.464	ENSMAUG00000008347	Dus3l	98	59.556	Mesocricetus_auratus
ENSDARG00000099528	dus3l	100	79.911	ENSMICG00000007097	DUS3L	97	59.467	Microcebus_murinus
ENSDARG00000099528	dus3l	100	79.018	ENSMOCG00000021796	Dus3l	98	59.463	Microtus_ochrogaster
ENSDARG00000099528	dus3l	100	87.946	ENSMMOG00000018377	dus3l	97	60.090	Mola_mola
ENSDARG00000099528	dus3l	100	81.250	ENSMODG00000001339	-	93	58.900	Monodelphis_domestica
ENSDARG00000099528	dus3l	100	88.393	ENSMALG00000007559	dus3l	95	58.716	Monopterus_albus
ENSDARG00000099528	dus3l	100	80.357	MGP_CAROLIEiJ_G0021789	Dus3l	98	59.043	Mus_caroli
ENSDARG00000099528	dus3l	100	80.357	ENSMUSG00000007603	Dus3l	98	59.492	Mus_musculus
ENSDARG00000099528	dus3l	100	79.911	MGP_PahariEiJ_G0020778	Dus3l	98	59.791	Mus_pahari
ENSDARG00000099528	dus3l	100	80.357	MGP_SPRETEiJ_G0022700	Dus3l	98	59.492	Mus_spretus
ENSDARG00000099528	dus3l	100	79.911	ENSMPUG00000006188	-	96	60.994	Mustela_putorius_furo
ENSDARG00000099528	dus3l	100	80.357	ENSMLUG00000007159	-	96	59.940	Myotis_lucifugus
ENSDARG00000099528	dus3l	100	79.018	ENSNGAG00000017157	Dus3l	98	60.060	Nannospalax_galili
ENSDARG00000099528	dus3l	100	87.946	ENSNBRG00000015011	dus3l	91	86.905	Neolamprologus_brichardi
ENSDARG00000099528	dus3l	100	81.250	ENSNLEG00000013734	DUS3L	88	80.112	Nomascus_leucogenys
ENSDARG00000099528	dus3l	100	80.804	ENSMEUG00000014401	-	100	63.822	Notamacropus_eugenii
ENSDARG00000099528	dus3l	100	77.232	ENSOPRG00000000954	DUS3L	78	77.232	Ochotona_princeps
ENSDARG00000099528	dus3l	100	81.250	ENSODEG00000015771	DUS3L	98	60.030	Octodon_degus
ENSDARG00000099528	dus3l	100	87.946	ENSONIG00000019793	dus3l	98	64.157	Oreochromis_niloticus
ENSDARG00000099528	dus3l	100	67.411	ENSOANG00000004386	-	96	55.935	Ornithorhynchus_anatinus
ENSDARG00000099528	dus3l	100	86.161	ENSORLG00000030245	dus3l	95	66.261	Oryzias_latipes
ENSDARG00000099528	dus3l	100	86.607	ENSOMEG00000023500	dus3l	95	64.992	Oryzias_melastigma
ENSDARG00000099528	dus3l	100	80.357	ENSOGAG00000016549	DUS3L	97	59.138	Otolemur_garnettii
ENSDARG00000099528	dus3l	90	53.746	ENSOARG00000007052	-	97	53.746	Ovis_aries
ENSDARG00000099528	dus3l	100	81.696	ENSPPAG00000038054	DUS3L	99	73.762	Pan_paniscus
ENSDARG00000099528	dus3l	100	79.911	ENSPPRG00000000633	-	97	73.552	Panthera_pardus
ENSDARG00000099528	dus3l	100	81.696	ENSPTRG00000010343	DUS3L	99	73.515	Pan_troglodytes
ENSDARG00000099528	dus3l	99	78.924	ENSPANG00000015039	DUS3L	99	68.317	Papio_anubis
ENSDARG00000099528	dus3l	100	84.821	ENSPKIG00000018035	dus3l	98	65.639	Paramormyrops_kingsleyae
ENSDARG00000099528	dus3l	100	79.911	ENSPSIG00000004965	-	98	62.158	Pelodiscus_sinensis
ENSDARG00000099528	dus3l	100	86.161	ENSPMGG00000021422	dus3l	93	64.329	Periophthalmus_magnuspinnatus
ENSDARG00000099528	dus3l	100	78.571	ENSPEMG00000020784	Dus3l	98	59.132	Peromyscus_maniculatus_bairdii
ENSDARG00000099528	dus3l	100	76.786	ENSPMAG00000007671	dus3l	97	57.185	Petromyzon_marinus
ENSDARG00000099528	dus3l	100	80.804	ENSPCIG00000008483	-	96	82.143	Phascolarctos_cinereus
ENSDARG00000099528	dus3l	100	87.500	ENSPFOG00000006750	dus3l	98	66.265	Poecilia_formosa
ENSDARG00000099528	dus3l	100	87.500	ENSPLAG00000011636	dus3l	98	66.114	Poecilia_latipinna
ENSDARG00000099528	dus3l	100	87.500	ENSPMEG00000011343	dus3l	96	59.002	Poecilia_mexicana
ENSDARG00000099528	dus3l	100	86.607	ENSPREG00000012315	dus3l	97	81.378	Poecilia_reticulata
ENSDARG00000099528	dus3l	100	81.696	ENSPPYG00000009435	DUS3L	97	58.136	Pongo_abelii
ENSDARG00000099528	dus3l	100	79.911	ENSPCOG00000026203	DUS3L	97	59.615	Propithecus_coquereli
ENSDARG00000099528	dus3l	100	80.357	ENSPVAG00000010503	-	74	80.351	Pteropus_vampyrus
ENSDARG00000099528	dus3l	100	87.946	ENSPNYG00000009052	dus3l	98	63.855	Pundamilia_nyererei
ENSDARG00000099528	dus3l	100	89.732	ENSPNAG00000022347	dus3l	98	68.304	Pygocentrus_nattereri
ENSDARG00000099528	dus3l	100	80.357	ENSRNOG00000050381	Dus3l	98	60.448	Rattus_norvegicus
ENSDARG00000099528	dus3l	100	81.250	ENSRBIG00000025322	DUS3L	99	81.250	Rhinopithecus_bieti
ENSDARG00000099528	dus3l	100	81.250	ENSRROG00000037008	DUS3L	99	73.515	Rhinopithecus_roxellana
ENSDARG00000099528	dus3l	99	44.898	YLR401C	-	91	33.748	Saccharomyces_cerevisiae
ENSDARG00000099528	dus3l	100	80.804	ENSSBOG00000020402	DUS3L	99	73.449	Saimiri_boliviensis_boliviensis
ENSDARG00000099528	dus3l	100	80.804	ENSSHAG00000014156	-	97	59.736	Sarcophilus_harrisii
ENSDARG00000099528	dus3l	100	87.054	ENSSFOG00015008797	dus3l	96	65.154	Scleropages_formosus
ENSDARG00000099528	dus3l	100	85.714	ENSSMAG00000004896	dus3l	98	64.526	Scophthalmus_maximus
ENSDARG00000099528	dus3l	100	88.839	ENSSDUG00000013517	dus3l	97	89.572	Seriola_dumerili
ENSDARG00000099528	dus3l	100	87.946	ENSSLDG00000016115	dus3l	91	89.037	Seriola_lalandi_dorsalis
ENSDARG00000099528	dus3l	80	71.111	ENSSARG00000001454	-	52	71.287	Sorex_araneus
ENSDARG00000099528	dus3l	89	80.500	ENSSPUG00000011128	-	94	80.606	Sphenodon_punctatus
ENSDARG00000099528	dus3l	100	87.500	ENSSPAG00000018660	dus3l	93	80.214	Stegastes_partitus
ENSDARG00000099528	dus3l	100	81.696	ENSSSCG00000040968	-	96	61.062	Sus_scrofa
ENSDARG00000099528	dus3l	57	55.467	ENSTGUG00000014885	-	100	54.933	Taeniopygia_guttata
ENSDARG00000099528	dus3l	100	77.632	ENSTGUG00000001021	-	99	58.886	Taeniopygia_guttata
ENSDARG00000099528	dus3l	100	86.607	ENSTRUG00000013055	dus3l	99	63.905	Takifugu_rubripes
ENSDARG00000099528	dus3l	100	87.500	ENSTNIG00000017537	dus3l	99	65.015	Tetraodon_nigroviridis
ENSDARG00000099528	dus3l	70	77.707	ENSTTRG00000013600	-	67	79.505	Tursiops_truncatus
ENSDARG00000099528	dus3l	100	80.357	ENSUAMG00000024269	-	93	79.032	Ursus_americanus
ENSDARG00000099528	dus3l	100	64.502	ENSUMAG00000010831	-	97	54.559	Ursus_maritimus
ENSDARG00000099528	dus3l	100	79.911	ENSVVUG00000013781	-	98	60.358	Vulpes_vulpes
ENSDARG00000099528	dus3l	100	82.143	ENSXETG00000027405	dus3l	98	59.444	Xenopus_tropicalis
ENSDARG00000099528	dus3l	100	86.607	ENSXCOG00000019852	dus3l	89	86.631	Xiphophorus_couchianus
ENSDARG00000099528	dus3l	100	86.161	ENSXMAG00000015252	dus3l	96	65.564	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0017150	tRNA dihydrouridine synthase activity	21873635.	IBA	Function
GO:0017150	tRNA dihydrouridine synthase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0050660	flavin adenine dinucleotide binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process