EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000099586 (Gene tree)
Gene ID: 100535654
Gene Symbol: CR382383.2
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13520 bases
Position: chr7:61876641-61890160
Accession: 100535654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135029	zf-U11-48K	PF05253.12	1.4e-15	1	2
ENSDARP00000135029	zf-U11-48K	PF05253.12	1.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000165409	CR382383.2-201	3179	XM_017357118	ENSDARP00000135029	179 (aa)	XP_017212607	A0A0G2KRK2

Gene Model

Click here to download ENSDARG00000099586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099586	CR382383.2	85	50.649	ENSDARG00000000887	zgc:56699	82	50.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099586	CR382383.2	83	46.622	ENSAPOG00000021951	-	81	46.622	Acanthochromis_polyacanthus
ENSDARG00000099586	CR382383.2	87	45.912	ENSAPOG00000000311	-	88	45.912	Acanthochromis_polyacanthus
ENSDARG00000099586	CR382383.2	88	48.148	ENSACIG00000013400	zgc:56699	89	48.148	Amphilophus_citrinellus
ENSDARG00000099586	CR382383.2	84	47.682	ENSAOCG00000013650	-	82	47.682	Amphiprion_ocellaris
ENSDARG00000099586	CR382383.2	84	41.722	ENSAPEG00000006689	zgc:56699	79	41.722	Amphiprion_percula
ENSDARG00000099586	CR382383.2	83	53.378	ENSATEG00000024058	zgc:56699	80	53.378	Anabas_testudineus
ENSDARG00000099586	CR382383.2	85	46.154	ENSACLG00000023562	zgc:56699	77	46.154	Astatotilapia_calliptera
ENSDARG00000099586	CR382383.2	88	65.031	ENSAMXG00000036095	-	68	65.031	Astyanax_mexicanus
ENSDARG00000099586	CR382383.2	85	55.195	ENSAMXG00000038346	zgc:56699	83	55.195	Astyanax_mexicanus
ENSDARG00000099586	CR382383.2	87	49.359	ENSCSEG00000021520	zgc:56699	71	49.359	Cynoglossus_semilaevis
ENSDARG00000099586	CR382383.2	96	38.596	ENSCVAG00000009972	zgc:56699	88	38.596	Cyprinodon_variegatus
ENSDARG00000099586	CR382383.2	64	41.880	ENSEBUG00000005577	-	59	41.880	Eptatretus_burgeri
ENSDARG00000099586	CR382383.2	84	58.553	ENSELUG00000003242	gtsf1	82	58.553	Esox_lucius
ENSDARG00000099586	CR382383.2	86	46.753	ENSFHEG00000006036	zgc:56699	80	41.558	Fundulus_heteroclitus
ENSDARG00000099586	CR382383.2	84	42.484	ENSGMOG00000007295	zgc:56699	97	42.484	Gadus_morhua
ENSDARG00000099586	CR382383.2	66	40.984	ENSGALG00000035365	-	69	40.984	Gallus_gallus
ENSDARG00000099586	CR382383.2	94	48.214	ENSGAFG00000020743	zgc:56699	92	48.214	Gambusia_affinis
ENSDARG00000099586	CR382383.2	85	46.154	ENSHBUG00000005327	zgc:56699	84	46.154	Haplochromis_burtoni
ENSDARG00000099586	CR382383.2	81	41.781	ENSHCOG00000010296	-	81	41.781	Hippocampus_comes
ENSDARG00000099586	CR382383.2	83	44.966	ENSIPUG00000011498	zgc:56699	78	44.966	Ictalurus_punctatus
ENSDARG00000099586	CR382383.2	88	50.318	ENSLBEG00000015981	zgc:56699	86	42.675	Labrus_bergylta
ENSDARG00000099586	CR382383.2	83	49.324	ENSLOCG00000004469	zgc:56699	99	49.324	Lepisosteus_oculatus
ENSDARG00000099586	CR382383.2	96	49.419	ENSMAMG00000001846	zgc:56699	92	49.419	Mastacembelus_armatus
ENSDARG00000099586	CR382383.2	85	46.154	ENSMZEG00005026479	zgc:56699	77	46.154	Maylandia_zebra
ENSDARG00000099586	CR382383.2	88	47.134	ENSMMOG00000017331	zgc:56699	80	47.134	Mola_mola
ENSDARG00000099586	CR382383.2	85	45.513	ENSNBRG00000006336	zgc:56699	84	45.513	Neolamprologus_brichardi
ENSDARG00000099586	CR382383.2	85	44.872	ENSONIG00000016720	zgc:56699	77	44.872	Oreochromis_niloticus
ENSDARG00000099586	CR382383.2	64	35.897	ENSOANG00000030381	-	74	35.897	Ornithorhynchus_anatinus
ENSDARG00000099586	CR382383.2	85	42.675	ENSORLG00000015258	-	83	42.675	Oryzias_latipes
ENSDARG00000099586	CR382383.2	67	50.000	ENSORLG00000025877	-	71	50.000	Oryzias_latipes
ENSDARG00000099586	CR382383.2	85	43.312	ENSORLG00020010990	-	83	43.312	Oryzias_latipes_hni
ENSDARG00000099586	CR382383.2	67	50.000	ENSORLG00020011013	-	71	50.000	Oryzias_latipes_hni
ENSDARG00000099586	CR382383.2	85	43.312	ENSORLG00015004961	zgc:56699	83	43.312	Oryzias_latipes_hsok
ENSDARG00000099586	CR382383.2	83	51.656	ENSOMEG00000021773	-	80	51.656	Oryzias_melastigma
ENSDARG00000099586	CR382383.2	67	49.167	ENSOMEG00000013200	-	77	49.167	Oryzias_melastigma
ENSDARG00000099586	CR382383.2	85	47.712	ENSOMEG00000021739	-	84	47.712	Oryzias_melastigma
ENSDARG00000099586	CR382383.2	83	48.322	ENSPKIG00000017039	zgc:56699	82	48.322	Paramormyrops_kingsleyae
ENSDARG00000099586	CR382383.2	88	43.636	ENSPMGG00000023241	zgc:56699	88	43.636	Periophthalmus_magnuspinnatus
ENSDARG00000099586	CR382383.2	63	41.176	ENSPMAG00000009653	-	91	41.176	Petromyzon_marinus
ENSDARG00000099586	CR382383.2	82	51.370	ENSPFOG00000009204	zgc:56699	87	49.686	Poecilia_formosa
ENSDARG00000099586	CR382383.2	82	46.575	ENSPLAG00000009088	zgc:56699	85	45.283	Poecilia_latipinna
ENSDARG00000099586	CR382383.2	82	51.370	ENSPMEG00000001443	zgc:56699	87	49.686	Poecilia_mexicana
ENSDARG00000099586	CR382383.2	86	50.314	ENSPREG00000000745	zgc:56699	87	50.314	Poecilia_reticulata
ENSDARG00000099586	CR382383.2	85	46.154	ENSPNYG00000002811	zgc:56699	84	46.154	Pundamilia_nyererei
ENSDARG00000099586	CR382383.2	83	58.389	ENSPNAG00000005165	zgc:56699	81	58.389	Pygocentrus_nattereri
ENSDARG00000099586	CR382383.2	86	49.351	ENSSFOG00015021600	zgc:56699	84	49.351	Scleropages_formosus
ENSDARG00000099586	CR382383.2	88	48.734	ENSSMAG00000020886	zgc:56699	85	49.032	Scophthalmus_maximus
ENSDARG00000099586	CR382383.2	83	52.703	ENSSDUG00000002033	zgc:56699	80	52.703	Seriola_dumerili
ENSDARG00000099586	CR382383.2	83	52.703	ENSSLDG00000014113	zgc:56699	80	52.703	Seriola_lalandi_dorsalis
ENSDARG00000099586	CR382383.2	70	44.882	ENSSPAG00000010005	-	79	44.882	Stegastes_partitus
ENSDARG00000099586	CR382383.2	81	51.701	ENSSPAG00000019854	-	80	51.701	Stegastes_partitus
ENSDARG00000099586	CR382383.2	83	45.098	ENSTRUG00000015537	zgc:56699	81	45.098	Takifugu_rubripes
ENSDARG00000099586	CR382383.2	67	52.500	ENSTNIG00000012515	zgc:56699	78	52.500	Tetraodon_nigroviridis
ENSDARG00000099586	CR382383.2	78	36.552	ENSXETG00000021263	-	50	36.552	Xenopus_tropicalis
ENSDARG00000099586	CR382383.2	94	44.048	ENSXCOG00000014400	zgc:56699	81	44.048	Xiphophorus_couchianus
ENSDARG00000099586	CR382383.2	94	48.214	ENSXMAG00000011692	zgc:56699	92	48.214	Xiphophorus_maculatus