EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000099618 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-1b17.6
Alias: -
Full Name: si:dkey-1b17.6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6543 bases
Position: chr22:1680628-1687170
Accession: ZDB-GENE-050208-384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	1	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	2	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	3	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	4	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	5	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	6	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	7	8
ENSDARP00000136892	zf-C2H2	PF00096.26	4.3e-48	8	8
ENSDARP00000137165	zf-C2H2	PF00096.26	1.5e-27	1	5
ENSDARP00000137165	zf-C2H2	PF00096.26	1.5e-27	2	5
ENSDARP00000137165	zf-C2H2	PF00096.26	1.5e-27	3	5
ENSDARP00000137165	zf-C2H2	PF00096.26	1.5e-27	4	5
ENSDARP00000137165	zf-C2H2	PF00096.26	1.5e-27	5	5
ENSDARP00000137165	zf-met	PF12874.7	7.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000166672	-	858	-	ENSDARP00000137165	286 (aa)	-	A0A0R4ING9
ENSDART00000158109	-	1276	-	ENSDARP00000136892	345 (aa)	-	A0A0R4IQQ4

Gene Model

Click here to download ENSDARG00000099618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000099618	si:dkey-1b17.6	99	49.856	ENSDARG00000103954	znf1152	95	52.649
ENSDARG00000099618	si:dkey-1b17.6	89	62.069	ENSDARG00000094309	si:ch73-92e7.6	97	51.667
ENSDARG00000099618	si:dkey-1b17.6	92	66.129	ENSDARG00000101044	si:ch73-138e16.6	93	54.867
ENSDARG00000099618	si:dkey-1b17.6	99	56.040	ENSDARG00000100882	znf1154	98	54.930
ENSDARG00000099618	si:dkey-1b17.6	93	73.620	ENSDARG00000093875	zgc:174224	89	71.023
ENSDARG00000099618	si:dkey-1b17.6	83	53.584	ENSDARG00000093562	si:dkey-20i20.7	96	59.701
ENSDARG00000099618	si:dkey-1b17.6	96	62.195	ENSDARG00000100544	zgc:173486	100	97.297
ENSDARG00000099618	si:dkey-1b17.6	91	50.926	ENSDARG00000099917	znf1005	95	50.470
ENSDARG00000099618	si:dkey-1b17.6	95	55.859	ENSDARG00000069869	zgc:113030	99	55.859
ENSDARG00000099618	si:dkey-1b17.6	99	61.979	ENSDARG00000104065	znf1154	96	61.979
ENSDARG00000099618	si:dkey-1b17.6	99	54.885	ENSDARG00000101694	znf1184	91	54.885
ENSDARG00000099618	si:dkey-1b17.6	77	72.222	ENSDARG00000115737	AL954741.2	100	52.698
ENSDARG00000099618	si:dkey-1b17.6	89	52.703	ENSDARG00000113011	zgc:113102	86	44.728
ENSDARG00000099618	si:dkey-1b17.6	97	54.187	ENSDARG00000094343	si:dkey-20i20.8	97	55.172
ENSDARG00000099618	si:dkey-1b17.6	89	61.194	ENSDARG00000077085	zgc:110821	99	62.609
ENSDARG00000099618	si:dkey-1b17.6	89	70.940	ENSDARG00000071833	znf1162	90	67.883
ENSDARG00000099618	si:dkey-1b17.6	80	61.111	ENSDARG00000073821	znf1177	85	52.880
ENSDARG00000099618	si:dkey-1b17.6	88	58.108	ENSDARG00000103875	CABZ01048402.2	82	44.314
ENSDARG00000099618	si:dkey-1b17.6	100	56.327	ENSDARG00000053165	zgc:113377	90	56.327
ENSDARG00000099618	si:dkey-1b17.6	99	49.533	ENSDARG00000071714	znf983	97	59.483
ENSDARG00000099618	si:dkey-1b17.6	99	51.133	ENSDARG00000116814	CU570894.2	99	51.133
ENSDARG00000099618	si:dkey-1b17.6	93	60.870	ENSDARG00000092246	si:dkey-20i20.3	88	60.870
ENSDARG00000099618	si:dkey-1b17.6	92	61.745	ENSDARG00000098898	si:ch211-255f4.2	100	61.745
ENSDARG00000099618	si:dkey-1b17.6	99	62.393	ENSDARG00000100361	znf1174	98	62.393
ENSDARG00000099618	si:dkey-1b17.6	98	73.494	ENSDARG00000102053	znf1164	100	73.913
ENSDARG00000099618	si:dkey-1b17.6	99	52.500	ENSDARG00000111614	znf1183	85	45.740
ENSDARG00000099618	si:dkey-1b17.6	96	53.093	ENSDARG00000105074	BX000701.2	99	53.093
ENSDARG00000099618	si:dkey-1b17.6	92	50.847	ENSDARG00000105075	BX324216.2	91	48.136
ENSDARG00000099618	si:dkey-1b17.6	91	44.300	ENSDARG00000101562	znf1014	87	44.300
ENSDARG00000099618	si:dkey-1b17.6	89	70.085	ENSDARG00000078159	zgc:175284	100	70.085
ENSDARG00000099618	si:dkey-1b17.6	100	53.481	ENSDARG00000098613	si:dkey-15h8.16	97	52.448
ENSDARG00000099618	si:dkey-1b17.6	81	68.142	ENSDARG00000113666	znf1173	76	66.000
ENSDARG00000099618	si:dkey-1b17.6	86	57.588	ENSDARG00000106808	CU856622.1	100	57.588
ENSDARG00000099618	si:dkey-1b17.6	84	68.571	ENSDARG00000093672	zgc:171435	100	71.552
ENSDARG00000099618	si:dkey-1b17.6	98	68.675	ENSDARG00000101425	si:dkey-1b17.5	84	68.675
ENSDARG00000099618	si:dkey-1b17.6	93	46.104	ENSDARG00000097928	si:ch73-40a17.4	84	46.104
ENSDARG00000099618	si:dkey-1b17.6	100	61.340	ENSDARG00000088507	znf982	92	61.340
ENSDARG00000099618	si:dkey-1b17.6	98	68.485	ENSDARG00000092088	si:dkey-4c15.8	99	69.027
ENSDARG00000099618	si:dkey-1b17.6	95	48.802	ENSDARG00000098021	si:dkey-111k8.2	90	48.773
ENSDARG00000099618	si:dkey-1b17.6	99	59.227	ENSDARG00000092605	znf1003	90	59.227
ENSDARG00000099618	si:dkey-1b17.6	95	56.507	ENSDARG00000088051	AL935044.1	100	56.507
ENSDARG00000099618	si:dkey-1b17.6	88	57.759	ENSDARG00000095455	si:dkey-20i20.10	95	52.941
ENSDARG00000099618	si:dkey-1b17.6	90	45.263	ENSDARG00000100915	si:ch211-255f4.7	99	48.819
ENSDARG00000099618	si:dkey-1b17.6	89	63.415	ENSDARG00000103827	znf1144	100	75.904
ENSDARG00000099618	si:dkey-1b17.6	89	59.829	ENSDARG00000111899	zgc:171435	89	59.829
ENSDARG00000099618	si:dkey-1b17.6	96	54.286	ENSDARG00000100587	zgc:113886	88	51.524
ENSDARG00000099618	si:dkey-1b17.6	99	60.684	ENSDARG00000102678	znf1181	97	60.684
ENSDARG00000099618	si:dkey-1b17.6	89	56.250	ENSDARG00000088927	CR450793.1	82	52.910
ENSDARG00000099618	si:dkey-1b17.6	89	57.500	ENSDARG00000014775	zgc:113220	100	59.130
ENSDARG00000099618	si:dkey-1b17.6	91	47.510	ENSDARG00000015482	zgc:113518	79	47.510
ENSDARG00000099618	si:dkey-1b17.6	95	59.686	ENSDARG00000112141	znf1169	91	52.439
ENSDARG00000099618	si:dkey-1b17.6	91	47.977	ENSDARG00000102401	znf1001	96	47.923
ENSDARG00000099618	si:dkey-1b17.6	89	61.207	ENSDARG00000101885	si:dkey-20i20.11	98	61.207
ENSDARG00000099618	si:dkey-1b17.6	99	51.220	ENSDARG00000108441	CU570894.1	100	51.220
ENSDARG00000099618	si:dkey-1b17.6	90	54.808	ENSDARG00000094736	znf1157	95	74.561
ENSDARG00000099618	si:dkey-1b17.6	74	52.174	ENSDARG00000078814	si:dkey-34m19.3	86	54.425
ENSDARG00000099618	si:dkey-1b17.6	93	64.655	ENSDARG00000115326	znf1002	87	61.143
ENSDARG00000099618	si:dkey-1b17.6	89	58.974	ENSDARG00000071725	znf1167	98	58.974
ENSDARG00000099618	si:dkey-1b17.6	91	53.535	ENSDARG00000102282	CABZ01063298.1	88	53.535
ENSDARG00000099618	si:dkey-1b17.6	99	58.621	ENSDARG00000071790	znf1153	97	58.621
ENSDARG00000099618	si:dkey-1b17.6	97	56.158	ENSDARG00000099172	BX000701.1	86	56.158
ENSDARG00000099618	si:dkey-1b17.6	89	72.340	ENSDARG00000095704	si:dkey-4c15.13	100	72.340
ENSDARG00000099618	si:dkey-1b17.6	91	48.256	ENSDARG00000115857	znf1001	96	48.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099618	si:dkey-1b17.6	91	46.043	ENSACIG00000007882	-	88	46.043	Amphilophus_citrinellus
ENSDARG00000099618	si:dkey-1b17.6	88	45.161	ENSACIG00000008886	znf1164	80	45.161	Amphilophus_citrinellus
ENSDARG00000099618	si:dkey-1b17.6	92	43.182	ENSACLG00000017449	-	57	43.182	Astatotilapia_calliptera
ENSDARG00000099618	si:dkey-1b17.6	95	45.802	ENSAMXG00000043291	-	69	44.615	Astyanax_mexicanus
ENSDARG00000099618	si:dkey-1b17.6	87	52.174	ENSAMXG00000041650	-	86	52.174	Astyanax_mexicanus
ENSDARG00000099618	si:dkey-1b17.6	87	49.333	ENSCSEG00000015585	-	78	49.333	Cynoglossus_semilaevis
ENSDARG00000099618	si:dkey-1b17.6	88	39.799	ENSEBUG00000015073	-	78	44.340	Eptatretus_burgeri
ENSDARG00000099618	si:dkey-1b17.6	94	47.157	ENSFHEG00000018009	-	51	47.157	Fundulus_heteroclitus
ENSDARG00000099618	si:dkey-1b17.6	98	41.364	ENSKMAG00000009563	-	90	48.649	Kryptolebias_marmoratus
ENSDARG00000099618	si:dkey-1b17.6	98	43.820	ENSMZEG00005027793	-	85	48.529	Maylandia_zebra
ENSDARG00000099618	si:dkey-1b17.6	92	41.262	ENSMZEG00005025568	-	79	41.262	Maylandia_zebra
ENSDARG00000099618	si:dkey-1b17.6	99	50.289	ENSMZEG00005027943	-	100	42.188	Maylandia_zebra
ENSDARG00000099618	si:dkey-1b17.6	92	40.000	ENSMZEG00005022161	-	78	40.000	Maylandia_zebra
ENSDARG00000099618	si:dkey-1b17.6	91	37.273	ENSMALG00000008638	-	59	37.273	Monopterus_albus
ENSDARG00000099618	si:dkey-1b17.6	99	50.575	ENSNBRG00000000577	-	81	49.741	Neolamprologus_brichardi
ENSDARG00000099618	si:dkey-1b17.6	94	42.135	ENSONIG00000003363	-	100	46.154	Oreochromis_niloticus
ENSDARG00000099618	si:dkey-1b17.6	93	36.771	ENSONIG00000006585	-	99	36.771	Oreochromis_niloticus
ENSDARG00000099618	si:dkey-1b17.6	88	42.727	ENSORLG00020019341	-	79	70.968	Oryzias_latipes_hni
ENSDARG00000099618	si:dkey-1b17.6	92	50.000	ENSPKIG00000020324	-	66	50.000	Paramormyrops_kingsleyae
ENSDARG00000099618	si:dkey-1b17.6	92	49.618	ENSPFOG00000001144	-	100	42.182	Poecilia_formosa
ENSDARG00000099618	si:dkey-1b17.6	91	47.449	ENSPMEG00000007573	zgc:113343	63	41.830	Poecilia_mexicana
ENSDARG00000099618	si:dkey-1b17.6	99	40.000	ENSPREG00000005538	-	76	40.000	Poecilia_reticulata
ENSDARG00000099618	si:dkey-1b17.6	91	46.667	ENSPREG00000001514	zgc:113343	61	46.667	Poecilia_reticulata
ENSDARG00000099618	si:dkey-1b17.6	92	42.439	ENSPNYG00000024183	zgc:173577	98	42.439	Pundamilia_nyererei
ENSDARG00000099618	si:dkey-1b17.6	99	52.830	ENSSDUG00000008682	-	99	46.875	Seriola_dumerili
ENSDARG00000099618	si:dkey-1b17.6	91	47.449	ENSXCOG00000017871	zgc:113343	66	47.449	Xiphophorus_couchianus
ENSDARG00000099618	si:dkey-1b17.6	98	41.830	ENSXMAG00000019923	zgc:113343	64	47.449	Xiphophorus_maculatus