EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099652 (Gene tree)
Gene ID: 558020
Gene Symbol: xpot
Alias: si:ch211-286m4.4
Full Name: exportin%2C tRNA (nuclear export receptor for tRNAs)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 29274 bases
Position: chr4:646154-675427
Accession: ZDB-GENE-041210-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138742	Xpo1	PF08389.12	2.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000171138	-	3653	XM_021475036	ENSDARP00000138742	971 (aa)	XP_021330711	G1K2X8

Gene Model

Click here to download ENSDARG00000099652's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099652	xpot	99	78.564	ENSG00000184575	XPOT	100	81.667	Homo_sapiens
ENSDARG00000099652	xpot	100	86.934	ENSAPOG00000001362	xpot	100	86.934	Acanthochromis_polyacanthus
ENSDARG00000099652	xpot	99	78.252	ENSAMEG00000018109	XPOT	99	78.252	Ailuropoda_melanoleuca
ENSDARG00000099652	xpot	98	87.539	ENSACIG00000009016	xpot	100	87.539	Amphilophus_citrinellus
ENSDARG00000099652	xpot	100	87.140	ENSAOCG00000005711	xpot	100	87.140	Amphiprion_ocellaris
ENSDARG00000099652	xpot	57	88.172	ENSAPEG00000024714	xpot	99	88.172	Amphiprion_percula
ENSDARG00000099652	xpot	100	87.140	ENSAPEG00000024660	XPOT	100	87.140	Amphiprion_percula
ENSDARG00000099652	xpot	100	86.831	ENSATEG00000000675	xpot	100	86.831	Anabas_testudineus
ENSDARG00000099652	xpot	99	78.460	ENSAPLG00000008073	XPOT	99	78.460	Anas_platyrhynchos
ENSDARG00000099652	xpot	99	77.211	ENSACAG00000003154	XPOT	99	77.211	Anolis_carolinensis
ENSDARG00000099652	xpot	98	66.527	ENSANAG00000032778	-	96	71.463	Aotus_nancymaae
ENSDARG00000099652	xpot	91	76.678	ENSANAG00000029914	-	99	76.678	Aotus_nancymaae
ENSDARG00000099652	xpot	100	86.317	ENSACLG00000008404	xpot	100	86.317	Astatotilapia_calliptera
ENSDARG00000099652	xpot	100	88.786	ENSAMXG00000013542	xpot	100	88.786	Astyanax_mexicanus
ENSDARG00000099652	xpot	99	78.356	ENSBTAG00000026962	XPOT	99	78.356	Bos_taurus
ENSDARG00000099652	xpot	99	78.342	ENSCJAG00000014762	XPOT	95	78.342	Callithrix_jacchus
ENSDARG00000099652	xpot	99	78.772	ENSCAFG00000000352	XPOT	99	78.772	Canis_familiaris
ENSDARG00000099652	xpot	99	78.772	ENSCAFG00020019527	XPOT	100	78.579	Canis_lupus_dingo
ENSDARG00000099652	xpot	99	78.564	ENSCHIG00000018310	XPOT	99	78.564	Capra_hircus
ENSDARG00000099652	xpot	99	78.460	ENSTSYG00000008852	XPOT	99	78.460	Carlito_syrichta
ENSDARG00000099652	xpot	99	59.443	ENSCAPG00000001620	XPOT	99	59.443	Cavia_aperea
ENSDARG00000099652	xpot	99	78.148	ENSCPOG00000027042	XPOT	99	78.148	Cavia_porcellus
ENSDARG00000099652	xpot	86	74.507	ENSCCAG00000035803	XPOT	97	77.798	Cebus_capucinus
ENSDARG00000099652	xpot	92	64.508	ENSCATG00000039901	-	97	64.508	Cercocebus_atys
ENSDARG00000099652	xpot	99	78.564	ENSCATG00000037826	XPOT	99	78.564	Cercocebus_atys
ENSDARG00000099652	xpot	99	78.252	ENSCLAG00000011382	XPOT	99	78.252	Chinchilla_lanigera
ENSDARG00000099652	xpot	99	78.564	ENSCSAG00000004475	XPOT	99	78.564	Chlorocebus_sabaeus
ENSDARG00000099652	xpot	65	79.224	ENSCHOG00000000288	-	68	79.224	Choloepus_hoffmanni
ENSDARG00000099652	xpot	99	77.732	ENSCPBG00000001003	XPOT	99	77.732	Chrysemys_picta_bellii
ENSDARG00000099652	xpot	99	43.788	ENSCSAVG00000001681	-	100	43.788	Ciona_savignyi
ENSDARG00000099652	xpot	96	57.447	ENSCANG00000030844	-	99	58.191	Colobus_angolensis_palliatus
ENSDARG00000099652	xpot	99	78.460	ENSCANG00000033371	XPOT	99	78.460	Colobus_angolensis_palliatus
ENSDARG00000099652	xpot	99	76.899	ENSCGRG00001016835	Xpot	99	76.899	Cricetulus_griseus_chok1gshd
ENSDARG00000099652	xpot	99	76.507	ENSCGRG00000000577	Xpot	99	76.507	Cricetulus_griseus_crigri
ENSDARG00000099652	xpot	100	85.905	ENSCSEG00000003973	xpot	100	85.905	Cynoglossus_semilaevis
ENSDARG00000099652	xpot	100	86.934	ENSCVAG00000020453	xpot	100	86.934	Cyprinodon_variegatus
ENSDARG00000099652	xpot	99	78.668	ENSDORG00000000259	Xpot	99	78.668	Dipodomys_ordii
ENSDARG00000099652	xpot	53	77.928	ENSETEG00000002981	-	55	78.261	Echinops_telfairi
ENSDARG00000099652	xpot	90	56.243	ENSEBUG00000007650	xpot	99	56.760	Eptatretus_burgeri
ENSDARG00000099652	xpot	99	78.089	ENSEASG00005007701	XPOT	98	78.089	Equus_asinus_asinus
ENSDARG00000099652	xpot	99	78.089	ENSECAG00000018336	XPOT	93	78.081	Equus_caballus
ENSDARG00000099652	xpot	85	80.132	ENSEEUG00000009700	XPOT	86	80.132	Erinaceus_europaeus
ENSDARG00000099652	xpot	70	85.714	ENSELUG00000009337	xpot	96	89.011	Esox_lucius
ENSDARG00000099652	xpot	99	78.564	ENSFCAG00000012360	XPOT	99	78.564	Felis_catus
ENSDARG00000099652	xpot	99	78.356	ENSFALG00000009938	XPOT	99	78.356	Ficedula_albicollis
ENSDARG00000099652	xpot	99	78.102	ENSFDAG00000012640	XPOT	99	78.102	Fukomys_damarensis
ENSDARG00000099652	xpot	82	86.170	ENSFHEG00000009648	xpot	99	86.170	Fundulus_heteroclitus
ENSDARG00000099652	xpot	98	73.569	ENSGMOG00000018888	xpot	100	73.569	Gadus_morhua
ENSDARG00000099652	xpot	99	78.252	ENSGALG00000009835	XPOT	99	78.252	Gallus_gallus
ENSDARG00000099652	xpot	100	86.317	ENSGAFG00000004150	xpot	100	86.317	Gambusia_affinis
ENSDARG00000099652	xpot	99	81.546	ENSGACG00000000589	xpot	100	81.546	Gasterosteus_aculeatus
ENSDARG00000099652	xpot	99	77.940	ENSGAGG00000022917	XPOT	99	77.940	Gopherus_agassizii
ENSDARG00000099652	xpot	99	78.564	ENSGGOG00000006089	XPOT	99	78.564	Gorilla_gorilla
ENSDARG00000099652	xpot	84	69.745	ENSGGOG00000027170	-	95	69.747	Gorilla_gorilla
ENSDARG00000099652	xpot	100	86.420	ENSHBUG00000020681	xpot	100	86.420	Haplochromis_burtoni
ENSDARG00000099652	xpot	98	78.010	ENSHGLG00000005833	XPOT	99	78.010	Heterocephalus_glaber_female
ENSDARG00000099652	xpot	99	78.044	ENSHGLG00100000810	XPOT	99	78.044	Heterocephalus_glaber_male
ENSDARG00000099652	xpot	99	78.170	ENSHCOG00000006415	xpot	100	78.170	Hippocampus_comes
ENSDARG00000099652	xpot	100	88.477	ENSIPUG00000015271	xpot	100	88.477	Ictalurus_punctatus
ENSDARG00000099652	xpot	99	78.356	ENSSTOG00000021805	XPOT	99	78.356	Ictidomys_tridecemlineatus
ENSDARG00000099652	xpot	99	66.632	ENSJJAG00000014767	-	99	66.840	Jaculus_jaculus
ENSDARG00000099652	xpot	98	75.707	ENSJJAG00000019671	-	99	75.707	Jaculus_jaculus
ENSDARG00000099652	xpot	94	86.937	ENSKMAG00000019126	xpot	100	86.937	Kryptolebias_marmoratus
ENSDARG00000099652	xpot	100	87.037	ENSLBEG00000000178	xpot	100	87.037	Labrus_bergylta
ENSDARG00000099652	xpot	99	77.259	ENSLACG00000014355	XPOT	99	77.259	Latimeria_chalumnae
ENSDARG00000099652	xpot	99	82.919	ENSLOCG00000016512	xpot	100	82.919	Lepisosteus_oculatus
ENSDARG00000099652	xpot	99	78.482	ENSLAFG00000009829	XPOT	99	78.482	Loxodonta_africana
ENSDARG00000099652	xpot	99	61.331	ENSMFAG00000038180	-	99	61.331	Macaca_fascicularis
ENSDARG00000099652	xpot	99	78.564	ENSMFAG00000032644	XPOT	99	78.564	Macaca_fascicularis
ENSDARG00000099652	xpot	96	63.197	ENSMMUG00000021196	-	99	63.966	Macaca_mulatta
ENSDARG00000099652	xpot	99	78.564	ENSMMUG00000007659	XPOT	99	78.564	Macaca_mulatta
ENSDARG00000099652	xpot	99	78.668	ENSMNEG00000033875	XPOT	99	78.668	Macaca_nemestrina
ENSDARG00000099652	xpot	99	57.692	ENSMNEG00000029730	-	99	57.692	Macaca_nemestrina
ENSDARG00000099652	xpot	99	75.442	ENSMLEG00000043977	XPOT	99	75.442	Mandrillus_leucophaeus
ENSDARG00000099652	xpot	100	86.111	ENSMAMG00000020690	xpot	100	86.111	Mastacembelus_armatus
ENSDARG00000099652	xpot	100	86.420	ENSMZEG00005018955	xpot	100	86.420	Maylandia_zebra
ENSDARG00000099652	xpot	99	78.067	ENSMGAG00000010208	XPOT	99	78.067	Meleagris_gallopavo
ENSDARG00000099652	xpot	98	75.365	ENSMAUG00000016836	Xpot	99	75.365	Mesocricetus_auratus
ENSDARG00000099652	xpot	99	78.460	ENSMICG00000012001	XPOT	99	78.460	Microcebus_murinus
ENSDARG00000099652	xpot	99	76.403	ENSMOCG00000014097	Xpot	99	76.403	Microtus_ochrogaster
ENSDARG00000099652	xpot	98	86.597	ENSMMOG00000005960	xpot	97	86.597	Mola_mola
ENSDARG00000099652	xpot	100	86.111	ENSMALG00000007523	xpot	100	86.111	Monopterus_albus
ENSDARG00000099652	xpot	99	77.315	MGP_CAROLIEiJ_G0015858	Xpot	99	77.315	Mus_caroli
ENSDARG00000099652	xpot	99	77.315	ENSMUSG00000034667	Xpot	99	77.315	Mus_musculus
ENSDARG00000099652	xpot	99	76.715	MGP_PahariEiJ_G0031228	Xpot	99	76.715	Mus_pahari
ENSDARG00000099652	xpot	99	75.052	MGP_SPRETEiJ_G0016683	Xpot	99	75.052	Mus_spretus
ENSDARG00000099652	xpot	99	78.772	ENSMPUG00000017529	XPOT	99	78.772	Mustela_putorius_furo
ENSDARG00000099652	xpot	99	78.460	ENSMLUG00000009664	XPOT	99	78.460	Myotis_lucifugus
ENSDARG00000099652	xpot	98	78.407	ENSNGAG00000020615	Xpot	99	78.407	Nannospalax_galili
ENSDARG00000099652	xpot	100	86.420	ENSNBRG00000017136	xpot	100	86.420	Neolamprologus_brichardi
ENSDARG00000099652	xpot	99	78.564	ENSNLEG00000017052	XPOT	99	78.564	Nomascus_leucogenys
ENSDARG00000099652	xpot	70	66.788	ENSMEUG00000016032	-	76	66.788	Notamacropus_eugenii
ENSDARG00000099652	xpot	72	91.429	ENSOPRG00000013079	XPOT	72	91.429	Ochotona_princeps
ENSDARG00000099652	xpot	98	78.010	ENSODEG00000004607	XPOT	99	78.010	Octodon_degus
ENSDARG00000099652	xpot	100	86.626	ENSONIG00000007471	xpot	100	86.626	Oreochromis_niloticus
ENSDARG00000099652	xpot	99	78.980	ENSOANG00000010932	XPOT	99	78.980	Ornithorhynchus_anatinus
ENSDARG00000099652	xpot	99	77.881	ENSOCUG00000012126	XPOT	97	77.881	Oryctolagus_cuniculus
ENSDARG00000099652	xpot	100	83.745	ENSORLG00000020105	xpot	100	83.745	Oryzias_latipes
ENSDARG00000099652	xpot	100	83.642	ENSORLG00020003770	xpot	100	83.642	Oryzias_latipes_hni
ENSDARG00000099652	xpot	99	82.195	ENSORLG00015003002	xpot	100	82.195	Oryzias_latipes_hsok
ENSDARG00000099652	xpot	99	81.489	ENSOMEG00000021300	xpot	100	81.489	Oryzias_melastigma
ENSDARG00000099652	xpot	99	71.088	ENSOGAG00000004952	XPOT	99	71.280	Otolemur_garnettii
ENSDARG00000099652	xpot	99	78.564	ENSOARG00000003504	XPOT	99	78.564	Ovis_aries
ENSDARG00000099652	xpot	82	67.544	ENSPPAG00000041601	-	94	66.456	Pan_paniscus
ENSDARG00000099652	xpot	99	58.316	ENSPPAG00000040981	-	99	58.316	Pan_paniscus
ENSDARG00000099652	xpot	99	78.564	ENSPPAG00000031361	XPOT	99	78.564	Pan_paniscus
ENSDARG00000099652	xpot	99	78.668	ENSPPRG00000005552	XPOT	99	78.668	Panthera_pardus
ENSDARG00000099652	xpot	99	78.086	ENSPTIG00000022072	XPOT	97	78.086	Panthera_tigris_altaica
ENSDARG00000099652	xpot	99	58.212	ENSPTRG00000046749	-	99	58.212	Pan_troglodytes
ENSDARG00000099652	xpot	99	58.108	ENSPTRG00000049416	-	99	58.108	Pan_troglodytes
ENSDARG00000099652	xpot	82	68.679	ENSPTRG00000045368	-	84	68.679	Pan_troglodytes
ENSDARG00000099652	xpot	99	78.564	ENSPTRG00000005173	XPOT	99	78.564	Pan_troglodytes
ENSDARG00000099652	xpot	99	76.483	ENSPANG00000030915	-	99	76.483	Papio_anubis
ENSDARG00000099652	xpot	99	78.564	ENSPANG00000001024	-	99	78.564	Papio_anubis
ENSDARG00000099652	xpot	99	83.784	ENSPKIG00000001935	xpot	100	83.784	Paramormyrops_kingsleyae
ENSDARG00000099652	xpot	99	77.940	ENSPSIG00000007346	XPOT	99	77.940	Pelodiscus_sinensis
ENSDARG00000099652	xpot	58	85.185	ENSPMGG00000016668	xpot	92	85.185	Periophthalmus_magnuspinnatus
ENSDARG00000099652	xpot	98	77.044	ENSPEMG00000002538	Xpot	99	77.044	Peromyscus_maniculatus_bairdii
ENSDARG00000099652	xpot	99	79.084	ENSPCIG00000029686	XPOT	99	79.144	Phascolarctos_cinereus
ENSDARG00000099652	xpot	100	86.934	ENSPFOG00000002834	xpot	100	86.934	Poecilia_formosa
ENSDARG00000099652	xpot	100	86.934	ENSPLAG00000017684	xpot	100	86.934	Poecilia_latipinna
ENSDARG00000099652	xpot	100	86.934	ENSPMEG00000006259	xpot	100	86.934	Poecilia_mexicana
ENSDARG00000099652	xpot	99	84.552	ENSPREG00000018505	xpot	100	84.552	Poecilia_reticulata
ENSDARG00000099652	xpot	99	78.460	ENSPPYG00000004727	XPOT	99	78.460	Pongo_abelii
ENSDARG00000099652	xpot	87	73.006	ENSPCAG00000001574	XPOT	88	73.006	Procavia_capensis
ENSDARG00000099652	xpot	99	77.927	ENSPCOG00000028383	XPOT	99	77.927	Propithecus_coquereli
ENSDARG00000099652	xpot	99	78.252	ENSPVAG00000008199	XPOT	99	78.252	Pteropus_vampyrus
ENSDARG00000099652	xpot	100	86.420	ENSPNYG00000022747	xpot	100	86.420	Pundamilia_nyererei
ENSDARG00000099652	xpot	100	87.963	ENSPNAG00000009140	xpot	100	87.963	Pygocentrus_nattereri
ENSDARG00000099652	xpot	68	74.405	ENSRNOG00000007088	Xpot	92	74.405	Rattus_norvegicus
ENSDARG00000099652	xpot	99	78.564	ENSRBIG00000041353	XPOT	99	78.564	Rhinopithecus_bieti
ENSDARG00000099652	xpot	99	63.174	ENSRBIG00000032079	-	99	63.174	Rhinopithecus_bieti
ENSDARG00000099652	xpot	99	78.564	ENSRROG00000038276	XPOT	99	78.564	Rhinopithecus_roxellana
ENSDARG00000099652	xpot	99	78.564	ENSSBOG00000024782	XPOT	99	78.564	Saimiri_boliviensis_boliviensis
ENSDARG00000099652	xpot	99	78.772	ENSSHAG00000007043	XPOT	99	78.772	Sarcophilus_harrisii
ENSDARG00000099652	xpot	99	83.593	ENSSFOG00015000827	xpot	100	83.593	Scleropages_formosus
ENSDARG00000099652	xpot	100	85.494	ENSSMAG00000005164	xpot	100	85.494	Scophthalmus_maximus
ENSDARG00000099652	xpot	100	86.523	ENSSDUG00000012514	xpot	100	86.523	Seriola_dumerili
ENSDARG00000099652	xpot	100	86.420	ENSSLDG00000019497	xpot	100	86.420	Seriola_lalandi_dorsalis
ENSDARG00000099652	xpot	82	71.781	ENSSARG00000005789	XPOT	88	71.781	Sorex_araneus
ENSDARG00000099652	xpot	99	76.891	ENSSPUG00000009837	XPOT	99	76.891	Sphenodon_punctatus
ENSDARG00000099652	xpot	99	78.460	ENSSSCG00000000466	XPOT	99	78.460	Sus_scrofa
ENSDARG00000099652	xpot	99	78.148	ENSTGUG00000006459	XPOT	99	78.148	Taeniopygia_guttata
ENSDARG00000099652	xpot	99	81.921	ENSTNIG00000002483	xpot	100	81.921	Tetraodon_nigroviridis
ENSDARG00000099652	xpot	89	78.788	ENSTBEG00000009738	XPOT	90	78.788	Tupaia_belangeri
ENSDARG00000099652	xpot	99	78.356	ENSTTRG00000016808	XPOT	99	78.356	Tursiops_truncatus
ENSDARG00000099652	xpot	99	78.772	ENSUAMG00000017168	XPOT	99	78.772	Ursus_americanus
ENSDARG00000099652	xpot	99	78.772	ENSUMAG00000020382	XPOT	99	78.772	Ursus_maritimus
ENSDARG00000099652	xpot	98	78.197	ENSVPAG00000004244	XPOT	100	78.197	Vicugna_pacos
ENSDARG00000099652	xpot	99	78.772	ENSVVUG00000015001	XPOT	100	78.579	Vulpes_vulpes
ENSDARG00000099652	xpot	99	74.611	ENSXETG00000021668	xpot	99	74.611	Xenopus_tropicalis
ENSDARG00000099652	xpot	99	83.402	ENSXCOG00000011945	xpot	100	83.402	Xiphophorus_couchianus
ENSDARG00000099652	xpot	100	86.523	ENSXMAG00000002827	xpot	100	86.523	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0000049	tRNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006409	tRNA export from nucleus	-	IEA	Process
GO:0008536	Ran GTPase binding	21873635.	IBA	Function
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0016363	nuclear matrix	21873635.	IBA	Component
GO:0071528	tRNA re-export from nucleus	21873635.	IBA	Process
GO:0071528	tRNA re-export from nucleus	-	IEA	Process