EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099913 (Gene tree)
Gene ID: 569999
Gene Symbol: snrnp35
Alias: zgc:112337
Full Name: small nuclear ribonucleoprotein 35 (U11/U12)
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4733 bases
Position: chr10:44373349-44378081
Accession: ZDB-GENE-050706-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135151	RRM_1	PF00076.22	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172191	-	762	-	ENSDARP00000135151	208 (aa)	-	Q4KMD3

Gene Model

Click here to download ENSDARG00000099913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099913	snrnp35	81	75.595	ENSG00000184209	SNRNP35	67	76.506	Homo_sapiens
ENSDARG00000099913	snrnp35	80	78.313	ENSAMEG00000019650	SNRNP35	67	78.313	Ailuropoda_melanoleuca
ENSDARG00000099913	snrnp35	98	73.786	ENSACIG00000003238	snrnp35	79	82.143	Amphilophus_citrinellus
ENSDARG00000099913	snrnp35	81	78.698	ENSAOCG00000007701	snrnp35	79	78.698	Amphiprion_ocellaris
ENSDARG00000099913	snrnp35	99	70.531	ENSAPEG00000023725	snrnp35	79	78.698	Amphiprion_percula
ENSDARG00000099913	snrnp35	81	81.657	ENSATEG00000021269	snrnp35	88	81.657	Anabas_testudineus
ENSDARG00000099913	snrnp35	94	69.951	ENSAPLG00000015654	SNRNP35	67	77.711	Anas_platyrhynchos
ENSDARG00000099913	snrnp35	98	66.825	ENSACAG00000015421	SNRNP35	64	77.711	Anolis_carolinensis
ENSDARG00000099913	snrnp35	81	75.000	ENSANAG00000025109	SNRNP35	65	75.904	Aotus_nancymaae
ENSDARG00000099913	snrnp35	89	77.297	ENSACLG00000020994	SNRNP35	80	81.548	Astatotilapia_calliptera
ENSDARG00000099913	snrnp35	89	77.297	ENSACLG00000020890	snrnp35	80	81.548	Astatotilapia_calliptera
ENSDARG00000099913	snrnp35	98	69.458	ENSAMXG00000026163	snrnp35	82	77.778	Astyanax_mexicanus
ENSDARG00000099913	snrnp35	80	77.711	ENSBTAG00000008060	SNRNP35	68	77.711	Bos_taurus
ENSDARG00000099913	snrnp35	81	74.405	ENSCJAG00000007131	SNRNP35	66	75.301	Callithrix_jacchus
ENSDARG00000099913	snrnp35	80	77.711	ENSCAFG00000007484	SNRNP35	67	77.711	Canis_familiaris
ENSDARG00000099913	snrnp35	80	77.711	ENSCAFG00020015272	-	67	77.711	Canis_lupus_dingo
ENSDARG00000099913	snrnp35	80	77.711	ENSCHIG00000006364	SNRNP35	68	77.711	Capra_hircus
ENSDARG00000099913	snrnp35	80	76.506	ENSTSYG00000034104	SNRNP35	67	76.506	Carlito_syrichta
ENSDARG00000099913	snrnp35	80	77.711	ENSCPOG00000002548	SNRNP35	67	77.711	Cavia_porcellus
ENSDARG00000099913	snrnp35	81	75.000	ENSCCAG00000001685	SNRNP35	66	75.904	Cebus_capucinus
ENSDARG00000099913	snrnp35	80	76.506	ENSCATG00000021946	SNRNP35	67	76.506	Cercocebus_atys
ENSDARG00000099913	snrnp35	80	78.313	ENSCLAG00000010232	SNRNP35	67	78.313	Chinchilla_lanigera
ENSDARG00000099913	snrnp35	81	75.595	ENSCSAG00000018950	SNRNP35	67	76.506	Chlorocebus_sabaeus
ENSDARG00000099913	snrnp35	80	77.711	ENSCHOG00000006263	SNRNP35	67	77.711	Choloepus_hoffmanni
ENSDARG00000099913	snrnp35	81	77.976	ENSCPBG00000025965	SNRNP35	62	77.976	Chrysemys_picta_bellii
ENSDARG00000099913	snrnp35	78	56.442	ENSCSAVG00000000748	-	92	56.442	Ciona_savignyi
ENSDARG00000099913	snrnp35	81	76.190	ENSCANG00000025364	SNRNP35	66	77.108	Colobus_angolensis_palliatus
ENSDARG00000099913	snrnp35	81	76.786	ENSCGRG00001012630	Snrnp35	67	77.711	Cricetulus_griseus_chok1gshd
ENSDARG00000099913	snrnp35	81	76.786	ENSCGRG00000002063	Snrnp35	67	77.711	Cricetulus_griseus_crigri
ENSDARG00000099913	snrnp35	80	78.313	ENSDNOG00000038603	SNRNP35	67	78.313	Dasypus_novemcinctus
ENSDARG00000099913	snrnp35	80	77.108	ENSDORG00000001859	Snrnp35	67	77.108	Dipodomys_ordii
ENSDARG00000099913	snrnp35	81	61.905	ENSEBUG00000003535	snrnp35	63	61.905	Eptatretus_burgeri
ENSDARG00000099913	snrnp35	80	78.313	ENSEASG00005012617	SNRNP35	67	78.313	Equus_asinus_asinus
ENSDARG00000099913	snrnp35	80	78.313	ENSECAG00000006080	SNRNP35	67	78.313	Equus_caballus
ENSDARG00000099913	snrnp35	80	77.711	ENSEEUG00000011544	SNRNP35	67	77.711	Erinaceus_europaeus
ENSDARG00000099913	snrnp35	99	75.598	ENSELUG00000000071	snrnp35	69	84.337	Esox_lucius
ENSDARG00000099913	snrnp35	80	77.711	ENSFCAG00000001159	SNRNP35	66	77.711	Felis_catus
ENSDARG00000099913	snrnp35	94	69.458	ENSFALG00000014650	SNRNP35	69	77.711	Ficedula_albicollis
ENSDARG00000099913	snrnp35	81	66.667	ENSFDAG00000018743	SNRNP35	66	66.867	Fukomys_damarensis
ENSDARG00000099913	snrnp35	96	69.951	ENSGMOG00000002299	snrnp35	72	79.042	Gadus_morhua
ENSDARG00000099913	snrnp35	94	69.951	ENSGALG00000003318	SNRNP35	63	77.711	Gallus_gallus
ENSDARG00000099913	snrnp35	81	80.952	ENSGACG00000020631	snrnp35	72	80.952	Gasterosteus_aculeatus
ENSDARG00000099913	snrnp35	81	75.595	ENSGGOG00000015936	SNRNP35	66	76.506	Gorilla_gorilla
ENSDARG00000099913	snrnp35	99	72.330	ENSHBUG00000015853	snrnp35	79	81.548	Haplochromis_burtoni
ENSDARG00000099913	snrnp35	80	77.711	ENSHGLG00000017961	SNRNP35	67	77.711	Heterocephalus_glaber_female
ENSDARG00000099913	snrnp35	80	77.711	ENSHGLG00100019252	SNRNP35	67	77.711	Heterocephalus_glaber_male
ENSDARG00000099913	snrnp35	82	76.608	ENSIPUG00000016053	snrnp35	65	76.608	Ictalurus_punctatus
ENSDARG00000099913	snrnp35	81	76.190	ENSSTOG00000025145	SNRNP35	68	77.108	Ictidomys_tridecemlineatus
ENSDARG00000099913	snrnp35	94	68.966	ENSJJAG00000013421	Snrnp35	66	76.506	Jaculus_jaculus
ENSDARG00000099913	snrnp35	80	78.313	ENSLACG00000017176	SNRNP35	59	78.313	Latimeria_chalumnae
ENSDARG00000099913	snrnp35	80	80.120	ENSLOCG00000018154	snrnp35	61	80.120	Lepisosteus_oculatus
ENSDARG00000099913	snrnp35	81	77.381	ENSLAFG00000022302	SNRNP35	67	78.313	Loxodonta_africana
ENSDARG00000099913	snrnp35	80	76.506	ENSMFAG00000008986	SNRNP35	67	76.506	Macaca_fascicularis
ENSDARG00000099913	snrnp35	81	75.595	ENSMMUG00000008411	SNRNP35	67	76.506	Macaca_mulatta
ENSDARG00000099913	snrnp35	80	76.506	ENSMNEG00000018139	SNRNP35	67	76.506	Macaca_nemestrina
ENSDARG00000099913	snrnp35	80	76.506	ENSMLEG00000040998	SNRNP35	66	76.506	Mandrillus_leucophaeus
ENSDARG00000099913	snrnp35	80	82.036	ENSMAMG00000018927	snrnp35	71	81.548	Mastacembelus_armatus
ENSDARG00000099913	snrnp35	89	77.297	ENSMZEG00005018928	snrnp35	80	81.548	Maylandia_zebra
ENSDARG00000099913	snrnp35	80	73.494	ENSMZEG00005018947	-	79	73.494	Maylandia_zebra
ENSDARG00000099913	snrnp35	94	70.443	ENSMGAG00000003241	SNRNP35	69	78.313	Meleagris_gallopavo
ENSDARG00000099913	snrnp35	81	76.786	ENSMAUG00000001690	Snrnp35	67	77.711	Mesocricetus_auratus
ENSDARG00000099913	snrnp35	80	76.506	ENSMICG00000026512	SNRNP35	66	76.506	Microcebus_murinus
ENSDARG00000099913	snrnp35	81	76.786	ENSMOCG00000000548	Snrnp35	67	77.711	Microtus_ochrogaster
ENSDARG00000099913	snrnp35	81	82.143	ENSMMOG00000018779	snrnp35	71	82.143	Mola_mola
ENSDARG00000099913	snrnp35	80	80.120	ENSMODG00000012481	SNRNP35	93	80.120	Monodelphis_domestica
ENSDARG00000099913	snrnp35	81	76.786	MGP_CAROLIEiJ_G0027752	Snrnp35	98	75.630	Mus_caroli
ENSDARG00000099913	snrnp35	81	76.786	ENSMUSG00000029402	Snrnp35	98	75.630	Mus_musculus
ENSDARG00000099913	snrnp35	81	76.190	MGP_PahariEiJ_G0024332	Snrnp35	98	75.630	Mus_pahari
ENSDARG00000099913	snrnp35	81	76.786	MGP_SPRETEiJ_G0028751	Snrnp35	98	75.630	Mus_spretus
ENSDARG00000099913	snrnp35	80	78.313	ENSMPUG00000019392	SNRNP35	67	78.313	Mustela_putorius_furo
ENSDARG00000099913	snrnp35	80	78.313	ENSMLUG00000025311	SNRNP35	67	78.313	Myotis_lucifugus
ENSDARG00000099913	snrnp35	99	65.403	ENSNGAG00000010711	Snrnp35	67	75.904	Nannospalax_galili
ENSDARG00000099913	snrnp35	81	75.595	ENSNLEG00000029859	SNRNP35	66	76.506	Nomascus_leucogenys
ENSDARG00000099913	snrnp35	81	76.786	ENSOPRG00000011119	SNRNP35	68	77.711	Ochotona_princeps
ENSDARG00000099913	snrnp35	80	77.711	ENSODEG00000019870	SNRNP35	67	77.711	Octodon_degus
ENSDARG00000099913	snrnp35	81	81.548	ENSONIG00000021361	snrnp35	71	81.548	Oreochromis_niloticus
ENSDARG00000099913	snrnp35	80	78.313	ENSOANG00000002697	SNRNP35	68	78.313	Ornithorhynchus_anatinus
ENSDARG00000099913	snrnp35	80	77.108	ENSOCUG00000021248	SNRNP35	67	77.108	Oryctolagus_cuniculus
ENSDARG00000099913	snrnp35	99	69.811	ENSORLG00000005673	snrnp35	79	80.952	Oryzias_latipes
ENSDARG00000099913	snrnp35	99	71.014	ENSORLG00015014439	snrnp35	82	81.548	Oryzias_latipes_hsok
ENSDARG00000099913	snrnp35	81	76.190	ENSOGAG00000011301	SNRNP35	67	77.108	Otolemur_garnettii
ENSDARG00000099913	snrnp35	80	77.711	ENSOARG00000004583	SNRNP35	68	77.711	Ovis_aries
ENSDARG00000099913	snrnp35	81	75.595	ENSPPAG00000000480	SNRNP35	66	76.506	Pan_paniscus
ENSDARG00000099913	snrnp35	80	77.711	ENSPPRG00000013139	SNRNP35	66	77.711	Panthera_pardus
ENSDARG00000099913	snrnp35	80	77.711	ENSPTIG00000015832	SNRNP35	66	77.711	Panthera_tigris_altaica
ENSDARG00000099913	snrnp35	81	75.595	ENSPTRG00000023573	SNRNP35	66	76.506	Pan_troglodytes
ENSDARG00000099913	snrnp35	80	76.506	ENSPANG00000019739	SNRNP35	66	76.506	Papio_anubis
ENSDARG00000099913	snrnp35	81	78.107	ENSPKIG00000005221	snrnp35	81	78.107	Paramormyrops_kingsleyae
ENSDARG00000099913	snrnp35	88	71.958	ENSPSIG00000000450	SNRNP35	62	77.381	Pelodiscus_sinensis
ENSDARG00000099913	snrnp35	99	67.130	ENSPCIG00000010978	SNRNP35	63	80.120	Phascolarctos_cinereus
ENSDARG00000099913	snrnp35	80	80.838	ENSPFOG00000019881	snrnp35	75	80.838	Poecilia_formosa
ENSDARG00000099913	snrnp35	81	75.595	ENSPPYG00000005088	SNRNP35	66	76.506	Pongo_abelii
ENSDARG00000099913	snrnp35	80	78.313	ENSPCAG00000011478	SNRNP35	67	78.313	Procavia_capensis
ENSDARG00000099913	snrnp35	81	75.595	ENSPCOG00000009946	SNRNP35	67	76.506	Propithecus_coquereli
ENSDARG00000099913	snrnp35	98	68.473	ENSPVAG00000015317	SNRNP35	67	78.313	Pteropus_vampyrus
ENSDARG00000099913	snrnp35	96	70.698	ENSPNAG00000020589	snrnp35	65	80.240	Pygocentrus_nattereri
ENSDARG00000099913	snrnp35	81	76.786	ENSRNOG00000001060	Snrnp35	68	77.711	Rattus_norvegicus
ENSDARG00000099913	snrnp35	81	75.595	ENSRBIG00000043111	SNRNP35	66	76.506	Rhinopithecus_bieti
ENSDARG00000099913	snrnp35	81	75.595	ENSRROG00000032878	SNRNP35	66	76.506	Rhinopithecus_roxellana
ENSDARG00000099913	snrnp35	81	75.000	ENSSBOG00000012231	SNRNP35	66	75.904	Saimiri_boliviensis_boliviensis
ENSDARG00000099913	snrnp35	98	69.951	ENSSHAG00000015558	-	68	79.518	Sarcophilus_harrisii
ENSDARG00000099913	snrnp35	80	77.711	ENSSHAG00000001216	-	68	77.711	Sarcophilus_harrisii
ENSDARG00000099913	snrnp35	81	81.548	ENSSFOG00015003785	snrnp35	90	81.548	Scleropages_formosus
ENSDARG00000099913	snrnp35	100	71.770	ENSSLDG00000017209	snrnp35	79	80.473	Seriola_lalandi_dorsalis
ENSDARG00000099913	snrnp35	79	77.576	ENSSARG00000012656	SNRNP35	68	77.576	Sorex_araneus
ENSDARG00000099913	snrnp35	93	68.317	ENSSPUG00000012768	SNRNP35	63	75.301	Sphenodon_punctatus
ENSDARG00000099913	snrnp35	99	71.635	ENSSPAG00000008207	snrnp35	79	79.290	Stegastes_partitus
ENSDARG00000099913	snrnp35	80	77.108	ENSSSCG00000022212	SNRNP35	77	77.108	Sus_scrofa
ENSDARG00000099913	snrnp35	94	69.458	ENSTGUG00000005364	-	69	77.711	Taeniopygia_guttata
ENSDARG00000099913	snrnp35	93	69.154	ENSTGUG00000015471	-	63	77.108	Taeniopygia_guttata
ENSDARG00000099913	snrnp35	97	73.892	ENSTNIG00000009984	snrnp35	82	79.769	Tetraodon_nigroviridis
ENSDARG00000099913	snrnp35	80	75.904	ENSTBEG00000002309	SNRNP35	67	75.904	Tupaia_belangeri
ENSDARG00000099913	snrnp35	80	78.313	ENSUAMG00000012611	SNRNP35	67	78.313	Ursus_americanus
ENSDARG00000099913	snrnp35	80	78.313	ENSUMAG00000003914	SNRNP35	65	78.313	Ursus_maritimus
ENSDARG00000099913	snrnp35	80	77.711	ENSVVUG00000027761	-	67	77.711	Vulpes_vulpes
ENSDARG00000099913	snrnp35	80	80.723	ENSXMAG00000019885	snrnp35	67	80.240	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005689	U12-type spliceosomal complex	21873635.	IBA	Component