EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000099972 (Gene tree)
Gene ID: 571621
Gene Symbol: nup153
Alias: fd23d09|si:ch211-153f2.5|wu:fd23d09
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 39651 bases
Position: chr19:46019313-46058963
Accession: ZDB-GENE-030131-4581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000141671	zf-RanBP	PF00641.18	4.2e-36	1	4
ENSDARP00000141671	zf-RanBP	PF00641.18	4.2e-36	2	4
ENSDARP00000141671	zf-RanBP	PF00641.18	4.2e-36	3	4
ENSDARP00000141671	zf-RanBP	PF00641.18	4.2e-36	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000171677	-	588	-	-	- (aa)	-	-
ENSDART00000163815	-	717	-	ENSDARP00000131525	239 (aa)	-	A0A0R4IEI9
ENSDART00000167185	-	578	-	ENSDARP00000132131	192 (aa)	-	A0A0R4IDM8
ENSDART00000172521	-	926	-	-	- (aa)	-	-
ENSDART00000170409	-	5513	XM_005159796	ENSDARP00000141671	1436 (aa)	XP_005159853	A0A0R4IVZ0

Gene Model

Click here to download ENSDARG00000099972's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000099972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000099972	nup153	99	41.335	ENSG00000124789	NUP153	99	41.349	Homo_sapiens
ENSDARG00000099972	nup153	60	62.260	ENSAPOG00000019495	nup153	100	54.273	Acanthochromis_polyacanthus
ENSDARG00000099972	nup153	99	41.313	ENSAMEG00000000721	NUP153	99	41.423	Ailuropoda_melanoleuca
ENSDARG00000099972	nup153	100	52.029	ENSACIG00000010784	nup153	100	52.683	Amphilophus_citrinellus
ENSDARG00000099972	nup153	100	55.263	ENSAOCG00000007098	nup153	100	55.867	Amphiprion_ocellaris
ENSDARG00000099972	nup153	100	55.168	ENSAPEG00000012075	nup153	100	56.175	Amphiprion_percula
ENSDARG00000099972	nup153	100	54.460	ENSATEG00000014134	nup153	100	55.754	Anabas_testudineus
ENSDARG00000099972	nup153	98	38.417	ENSACAG00000004118	NUP153	99	39.059	Anolis_carolinensis
ENSDARG00000099972	nup153	99	42.265	ENSANAG00000001808	NUP153	99	42.010	Aotus_nancymaae
ENSDARG00000099972	nup153	100	53.992	ENSACLG00000016592	nup153	99	53.637	Astatotilapia_calliptera
ENSDARG00000099972	nup153	100	58.170	ENSAMXG00000021025	nup153	100	63.747	Astyanax_mexicanus
ENSDARG00000099972	nup153	99	41.037	ENSBTAG00000017128	NUP153	99	40.822	Bos_taurus
ENSDARG00000099972	nup153	99	41.839	ENSCJAG00000006685	NUP153	99	41.338	Callithrix_jacchus
ENSDARG00000099972	nup153	99	41.146	ENSCAFG00000010146	NUP153	99	41.725	Canis_familiaris
ENSDARG00000099972	nup153	99	41.161	ENSCAFG00020010901	NUP153	99	41.719	Canis_lupus_dingo
ENSDARG00000099972	nup153	99	40.935	ENSCHIG00000023764	NUP153	99	40.667	Capra_hircus
ENSDARG00000099972	nup153	98	41.261	ENSTSYG00000001251	NUP153	98	40.562	Carlito_syrichta
ENSDARG00000099972	nup153	99	41.517	ENSCPOG00000004007	NUP153	99	40.128	Cavia_porcellus
ENSDARG00000099972	nup153	99	39.474	ENSCCAG00000024038	NUP153	99	38.811	Cebus_capucinus
ENSDARG00000099972	nup153	99	41.865	ENSCATG00000041429	NUP153	99	41.236	Cercocebus_atys
ENSDARG00000099972	nup153	99	40.871	ENSCLAG00000001915	NUP153	99	40.673	Chinchilla_lanigera
ENSDARG00000099972	nup153	99	41.956	ENSCSAG00000007624	NUP153	99	41.176	Chlorocebus_sabaeus
ENSDARG00000099972	nup153	50	37.683	ENSCHOG00000013388	-	82	38.012	Choloepus_hoffmanni
ENSDARG00000099972	nup153	54	39.216	ENSCHOG00000008316	-	64	38.538	Choloepus_hoffmanni
ENSDARG00000099972	nup153	99	42.579	ENSCPBG00000008333	NUP153	99	42.214	Chrysemys_picta_bellii
ENSDARG00000099972	nup153	99	40.553	ENSCANG00000033390	NUP153	99	40.462	Colobus_angolensis_palliatus
ENSDARG00000099972	nup153	99	43.024	ENSCGRG00001021016	Nup153	99	41.710	Cricetulus_griseus_chok1gshd
ENSDARG00000099972	nup153	98	42.951	ENSCGRG00000009244	Nup153	100	41.438	Cricetulus_griseus_crigri
ENSDARG00000099972	nup153	100	52.903	ENSCSEG00000017912	nup153	99	52.359	Cynoglossus_semilaevis
ENSDARG00000099972	nup153	94	51.604	ENSCVAG00000020646	nup153	98	52.342	Cyprinodon_variegatus
ENSDARG00000099972	nup153	99	40.623	ENSDNOG00000001153	NUP153	99	39.487	Dasypus_novemcinctus
ENSDARG00000099972	nup153	99	41.721	ENSDORG00000001736	Nup153	99	41.958	Dipodomys_ordii
ENSDARG00000099972	nup153	99	40.877	ENSEASG00005009945	NUP153	99	40.906	Equus_asinus_asinus
ENSDARG00000099972	nup153	99	40.683	ENSECAG00000016010	NUP153	99	40.651	Equus_caballus
ENSDARG00000099972	nup153	68	46.348	ENSEEUG00000010183	NUP153	74	45.500	Erinaceus_europaeus
ENSDARG00000099972	nup153	100	57.246	ENSELUG00000019108	nup153	100	57.455	Esox_lucius
ENSDARG00000099972	nup153	99	41.304	ENSFCAG00000011583	NUP153	99	40.935	Felis_catus
ENSDARG00000099972	nup153	95	39.891	ENSFALG00000013388	NUP153	99	39.892	Ficedula_albicollis
ENSDARG00000099972	nup153	92	69.630	ENSFHEG00000013401	nup153	99	70.197	Fundulus_heteroclitus
ENSDARG00000099972	nup153	90	58.896	ENSGMOG00000010422	nup153	92	55.758	Gadus_morhua
ENSDARG00000099972	nup153	99	41.656	ENSGALG00000012720	NUP153	99	42.446	Gallus_gallus
ENSDARG00000099972	nup153	100	52.216	ENSGAFG00000010927	nup153	100	52.707	Gambusia_affinis
ENSDARG00000099972	nup153	99	52.412	ENSGACG00000005389	nup153	100	51.948	Gasterosteus_aculeatus
ENSDARG00000099972	nup153	99	42.414	ENSGAGG00000022386	NUP153	99	41.956	Gopherus_agassizii
ENSDARG00000099972	nup153	99	40.637	ENSGGOG00000014261	NUP153	99	41.042	Gorilla_gorilla
ENSDARG00000099972	nup153	100	54.251	ENSHBUG00000002944	nup153	99	53.934	Haplochromis_burtoni
ENSDARG00000099972	nup153	99	40.953	ENSHGLG00000007924	NUP153	99	40.976	Heterocephalus_glaber_female
ENSDARG00000099972	nup153	99	40.953	ENSHGLG00100001529	NUP153	99	40.976	Heterocephalus_glaber_male
ENSDARG00000099972	nup153	100	49.381	ENSHCOG00000019361	nup153	100	49.740	Hippocampus_comes
ENSDARG00000099972	nup153	100	65.791	ENSIPUG00000014605	nup153	100	65.343	Ictalurus_punctatus
ENSDARG00000099972	nup153	98	41.961	ENSSTOG00000005807	NUP153	100	41.449	Ictidomys_tridecemlineatus
ENSDARG00000099972	nup153	99	42.037	ENSJJAG00000016760	Nup153	99	41.576	Jaculus_jaculus
ENSDARG00000099972	nup153	100	53.245	ENSKMAG00000006344	nup153	100	53.900	Kryptolebias_marmoratus
ENSDARG00000099972	nup153	100	54.690	ENSLBEG00000002982	nup153	99	55.290	Labrus_bergylta
ENSDARG00000099972	nup153	98	38.969	ENSLACG00000006480	NUP153	99	38.632	Latimeria_chalumnae
ENSDARG00000099972	nup153	100	52.760	ENSLOCG00000008267	nup153	100	52.016	Lepisosteus_oculatus
ENSDARG00000099972	nup153	99	42.603	ENSLAFG00000015905	NUP153	99	41.940	Loxodonta_africana
ENSDARG00000099972	nup153	99	41.838	ENSMFAG00000045732	NUP153	99	41.225	Macaca_fascicularis
ENSDARG00000099972	nup153	99	41.902	ENSMMUG00000001993	NUP153	99	41.300	Macaca_mulatta
ENSDARG00000099972	nup153	99	41.902	ENSMNEG00000038011	NUP153	99	41.300	Macaca_nemestrina
ENSDARG00000099972	nup153	99	41.902	ENSMLEG00000030776	NUP153	99	41.236	Mandrillus_leucophaeus
ENSDARG00000099972	nup153	100	53.827	ENSMAMG00000013184	nup153	99	55.190	Mastacembelus_armatus
ENSDARG00000099972	nup153	100	54.327	ENSMZEG00005004371	nup153	100	53.511	Maylandia_zebra
ENSDARG00000099972	nup153	98	40.039	ENSMGAG00000003139	NUP153	99	41.249	Meleagris_gallopavo
ENSDARG00000099972	nup153	99	42.214	ENSMICG00000006089	NUP153	99	41.767	Microcebus_murinus
ENSDARG00000099972	nup153	99	42.523	ENSMOCG00000007623	Nup153	99	42.894	Microtus_ochrogaster
ENSDARG00000099972	nup153	89	63.965	ENSMMOG00000019049	nup153	100	52.151	Mola_mola
ENSDARG00000099972	nup153	100	53.785	ENSMALG00000013995	nup153	100	53.948	Monopterus_albus
ENSDARG00000099972	nup153	99	41.226	MGP_CAROLIEiJ_G0018483	Nup153	99	41.377	Mus_caroli
ENSDARG00000099972	nup153	99	41.462	ENSMUSG00000021374	Nup153	99	41.366	Mus_musculus
ENSDARG00000099972	nup153	99	41.537	MGP_PahariEiJ_G0019551	Nup153	99	41.017	Mus_pahari
ENSDARG00000099972	nup153	99	41.424	MGP_SPRETEiJ_G0019363	Nup153	99	41.404	Mus_spretus
ENSDARG00000099972	nup153	99	39.738	ENSMLUG00000004775	NUP153	99	39.195	Myotis_lucifugus
ENSDARG00000099972	nup153	99	41.564	ENSNGAG00000013817	Nup153	99	40.696	Nannospalax_galili
ENSDARG00000099972	nup153	100	53.886	ENSNBRG00000012456	nup153	100	52.907	Neolamprologus_brichardi
ENSDARG00000099972	nup153	99	41.603	ENSNLEG00000001141	NUP153	99	41.399	Nomascus_leucogenys
ENSDARG00000099972	nup153	74	56.627	ENSMEUG00000012874	NUP153	74	56.627	Notamacropus_eugenii
ENSDARG00000099972	nup153	86	44.444	ENSOPRG00000006221	NUP153	86	44.412	Ochotona_princeps
ENSDARG00000099972	nup153	99	39.922	ENSODEG00000005620	NUP153	99	40.103	Octodon_degus
ENSDARG00000099972	nup153	100	54.066	ENSONIG00000002524	nup153	99	53.871	Oreochromis_niloticus
ENSDARG00000099972	nup153	98	43.025	ENSOANG00000011858	NUP153	99	42.450	Ornithorhynchus_anatinus
ENSDARG00000099972	nup153	99	41.315	ENSOCUG00000003064	NUP153	99	42.027	Oryctolagus_cuniculus
ENSDARG00000099972	nup153	100	52.026	ENSORLG00000012674	nup153	99	52.067	Oryzias_latipes
ENSDARG00000099972	nup153	100	52.299	ENSORLG00020006026	nup153	99	53.133	Oryzias_latipes_hni
ENSDARG00000099972	nup153	100	52.077	ENSORLG00015013823	nup153	99	52.274	Oryzias_latipes_hsok
ENSDARG00000099972	nup153	100	53.183	ENSOMEG00000012062	nup153	100	54.172	Oryzias_melastigma
ENSDARG00000099972	nup153	99	40.696	ENSOGAG00000014899	NUP153	99	40.576	Otolemur_garnettii
ENSDARG00000099972	nup153	98	40.635	ENSOARG00000011514	NUP153	99	40.549	Ovis_aries
ENSDARG00000099972	nup153	99	40.991	ENSPPAG00000029729	NUP153	99	41.221	Pan_paniscus
ENSDARG00000099972	nup153	99	41.304	ENSPPRG00000006160	NUP153	99	40.999	Panthera_pardus
ENSDARG00000099972	nup153	99	40.985	ENSPTIG00000017212	NUP153	99	40.781	Panthera_tigris_altaica
ENSDARG00000099972	nup153	99	41.055	ENSPTRG00000017752	NUP153	99	41.397	Pan_troglodytes
ENSDARG00000099972	nup153	99	42.058	ENSPANG00000015139	NUP153	99	41.555	Papio_anubis
ENSDARG00000099972	nup153	98	40.711	ENSPSIG00000017226	NUP153	99	40.969	Pelodiscus_sinensis
ENSDARG00000099972	nup153	100	51.990	ENSPMGG00000001716	nup153	100	52.114	Periophthalmus_magnuspinnatus
ENSDARG00000099972	nup153	99	43.033	ENSPEMG00000020772	Nup153	99	42.078	Peromyscus_maniculatus_bairdii
ENSDARG00000099972	nup153	58	62.500	ENSPMAG00000002487	-	100	62.500	Petromyzon_marinus
ENSDARG00000099972	nup153	99	41.016	ENSPCIG00000029680	NUP153	99	40.731	Phascolarctos_cinereus
ENSDARG00000099972	nup153	100	50.223	ENSPFOG00000013146	nup153	99	51.704	Poecilia_formosa
ENSDARG00000099972	nup153	100	53.949	ENSPMEG00000021677	nup153	99	53.915	Poecilia_mexicana
ENSDARG00000099972	nup153	100	52.967	ENSPREG00000007463	nup153	99	52.870	Poecilia_reticulata
ENSDARG00000099972	nup153	99	40.372	ENSPPYG00000016259	NUP153	99	40.839	Pongo_abelii
ENSDARG00000099972	nup153	63	53.147	ENSPCAG00000010444	NUP153	64	53.287	Procavia_capensis
ENSDARG00000099972	nup153	99	41.161	ENSPCOG00000014488	NUP153	99	40.513	Propithecus_coquereli
ENSDARG00000099972	nup153	92	39.517	ENSPVAG00000012632	NUP153	98	40.385	Pteropus_vampyrus
ENSDARG00000099972	nup153	100	54.298	ENSPNYG00000011225	nup153	100	53.817	Pundamilia_nyererei
ENSDARG00000099972	nup153	100	67.685	ENSPNAG00000024377	nup153	100	66.916	Pygocentrus_nattereri
ENSDARG00000099972	nup153	99	40.641	ENSRNOG00000001456	Nup153	99	41.256	Rattus_norvegicus
ENSDARG00000099972	nup153	99	41.306	ENSRBIG00000041878	NUP153	99	41.105	Rhinopithecus_bieti
ENSDARG00000099972	nup153	97	41.661	ENSRROG00000029849	NUP153	99	41.310	Rhinopithecus_roxellana
ENSDARG00000099972	nup153	99	41.997	ENSSBOG00000024532	NUP153	99	42.058	Saimiri_boliviensis_boliviensis
ENSDARG00000099972	nup153	61	39.809	ENSSHAG00000016087	-	96	39.309	Sarcophilus_harrisii
ENSDARG00000099972	nup153	100	51.980	ENSSFOG00015011040	nup153	100	51.947	Scleropages_formosus
ENSDARG00000099972	nup153	100	52.645	ENSSMAG00000008418	nup153	99	53.744	Scophthalmus_maximus
ENSDARG00000099972	nup153	60	66.057	ENSSDUG00000010779	nup153	100	56.815	Seriola_dumerili
ENSDARG00000099972	nup153	60	65.753	ENSSLDG00000012692	nup153	83	57.132	Seriola_lalandi_dorsalis
ENSDARG00000099972	nup153	86	56.380	ENSSARG00000013269	NUP153	95	56.380	Sorex_araneus
ENSDARG00000099972	nup153	99	42.243	ENSSPUG00000016687	NUP153	99	41.898	Sphenodon_punctatus
ENSDARG00000099972	nup153	100	53.052	ENSSPAG00000014945	nup153	99	55.196	Stegastes_partitus
ENSDARG00000099972	nup153	99	41.902	ENSSSCG00000026034	NUP153	99	40.862	Sus_scrofa
ENSDARG00000099972	nup153	98	39.128	ENSTGUG00000005917	NUP153	100	39.139	Taeniopygia_guttata
ENSDARG00000099972	nup153	100	52.049	ENSTRUG00000010163	nup153	100	51.799	Takifugu_rubripes
ENSDARG00000099972	nup153	99	52.320	ENSTNIG00000009182	nup153	100	52.299	Tetraodon_nigroviridis
ENSDARG00000099972	nup153	66	40.385	ENSTBEG00000004161	NUP153	63	40.232	Tupaia_belangeri
ENSDARG00000099972	nup153	96	42.268	ENSTTRG00000007060	NUP153	88	43.689	Tursiops_truncatus
ENSDARG00000099972	nup153	60	36.929	ENSUAMG00000015215	NUP153	96	37.657	Ursus_americanus
ENSDARG00000099972	nup153	98	39.883	ENSUMAG00000017135	NUP153	99	39.608	Ursus_maritimus
ENSDARG00000099972	nup153	99	42.278	ENSVPAG00000002072	NUP153	99	42.095	Vicugna_pacos
ENSDARG00000099972	nup153	99	41.368	ENSVVUG00000003265	NUP153	99	41.525	Vulpes_vulpes
ENSDARG00000099972	nup153	99	39.441	ENSXETG00000014197	nup153	99	37.911	Xenopus_tropicalis
ENSDARG00000099972	nup153	100	52.760	ENSXCOG00000020098	nup153	100	53.307	Xiphophorus_couchianus
ENSDARG00000099972	nup153	100	52.772	ENSXMAG00000003437	nup153	99	53.454	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001525	angiogenesis	26221075.	IMP	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	-	IEA	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function