EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000100114 (Gene tree)
Gene ID
446168
Gene Symbol
sf3a3
Alias
wu:fi15a06|wu:fj94f01|zgc:110227
Full Name
splicing factor 3a%2C subunit 3
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
16467 bases
Position
chr19:17288529-17304995
Accession
ZDB-GENE-040908-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000135753SF3a60_bindingdPF12108.83.3e-1411
ENSDARP00000140243SF3a60_bindingdPF12108.83.3e-1411
ENSDARP00000151358SF3a60_bindingdPF12108.83.3e-1411
ENSDARP00000140959SF3a60_bindingdPF12108.85e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000162355-2016-ENSDARP00000140959419 (aa)-A0A0R4IZ70
ENSDART00000171284-2223-ENSDARP00000135753501 (aa)-A0A0R4ILH7
ENSDART00000160433-6247-ENSDARP00000140243501 (aa)-A0A0R4ILH7
ENSDART00000190798-2221-ENSDARP00000151358501 (aa)-A0A0R4ILH7
Gene Model
Click here to download ENSDARG00000100114's gene model file
Pathways
Pathway IDPathway NameSource
dre03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000100114's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000100114sf3a310091.885ENSG00000183431SF3A310091.218Homo_sapiens
ENSDARG00000100114sf3a310093.556ENSAPOG00000015608sf3a310093.014Acanthochromis_polyacanthus
ENSDARG00000100114sf3a310091.647ENSAMEG00000001262SF3A310091.018Ailuropoda_melanoleuca
ENSDARG00000100114sf3a39587.377ENSACIG00000009061sf3a39987.377Amphilophus_citrinellus
ENSDARG00000100114sf3a310093.556ENSAOCG00000013954sf3a310093.014Amphiprion_ocellaris
ENSDARG00000100114sf3a310093.556ENSAPEG00000007297sf3a310093.014Amphiprion_percula
ENSDARG00000100114sf3a310094.749ENSATEG00000008754sf3a310093.613Anabas_testudineus
ENSDARG00000100114sf3a310092.363ENSAPLG00000014900SF3A310091.684Anas_platyrhynchos
ENSDARG00000100114sf3a310091.408ENSACAG00000017058SF3A310090.419Anolis_carolinensis
ENSDARG00000100114sf3a310071.058ENSANAG00000036903-10071.058Aotus_nancymaae
ENSDARG00000100114sf3a310091.885ENSANAG00000014878SF3A310087.952Aotus_nancymaae
ENSDARG00000100114sf3a310094.033ENSACLG00000017977sf3a310093.613Astatotilapia_calliptera
ENSDARG00000100114sf3a310095.704ENSAMXG00000016855sf3a38794.411Astyanax_mexicanus
ENSDARG00000100114sf3a310091.647ENSBTAG00000007299SF3A310091.018Bos_taurus
ENSDARG00000100114sf3a310052.969WBGene00011758T13H5.410051.690Caenorhabditis_elegans
ENSDARG00000100114sf3a310091.885ENSCJAG00000002176SF3A310091.218Callithrix_jacchus
ENSDARG00000100114sf3a310091.647ENSCAFG00000000683-10091.018Canis_familiaris
ENSDARG00000100114sf3a310091.647ENSCAFG00000003222-10091.018Canis_familiaris
ENSDARG00000100114sf3a310091.647ENSCAFG00020006186SF3A310091.018Canis_lupus_dingo
ENSDARG00000100114sf3a310091.647ENSCHIG00000020638SF3A310091.018Capra_hircus
ENSDARG00000100114sf3a310084.830ENSTSYG00000008417SF3A310084.830Carlito_syrichta
ENSDARG00000100114sf3a39456.543ENSCAPG00000003466SF3A310056.522Cavia_aperea
ENSDARG00000100114sf3a310091.885ENSCPOG00000008660SF3A310091.218Cavia_porcellus
ENSDARG00000100114sf3a310091.885ENSCCAG00000033732SF3A310091.218Cebus_capucinus
ENSDARG00000100114sf3a310065.805ENSCCAG00000034048-10063.221Cebus_capucinus
ENSDARG00000100114sf3a310091.885ENSCATG00000043496SF3A310091.218Cercocebus_atys
ENSDARG00000100114sf3a39473.561ENSCATG00000041660-10075.267Cercocebus_atys
ENSDARG00000100114sf3a310068.526ENSCATG00000043537-10068.924Cercocebus_atys
ENSDARG00000100114sf3a310091.647ENSCLAG00000010838SF3A310091.018Chinchilla_lanigera
ENSDARG00000100114sf3a39590.756ENSCSAG00000001120SF3A310090.756Chlorocebus_sabaeus
ENSDARG00000100114sf3a38085.185ENSCHOG00000006849SF3A38085.185Choloepus_hoffmanni
ENSDARG00000100114sf3a36270.192ENSCPBG00000007472-7970.192Chrysemys_picta_bellii
ENSDARG00000100114sf3a310085.203ENSCPBG00000018291-10082.435Chrysemys_picta_bellii
ENSDARG00000100114sf3a310069.048ENSCING00000002730-10068.924Ciona_intestinalis
ENSDARG00000100114sf3a310068.735ENSCSAVG00000005063-10067.465Ciona_savignyi
ENSDARG00000100114sf3a310091.885ENSCANG00000042083SF3A310091.218Colobus_angolensis_palliatus
ENSDARG00000100114sf3a310065.868ENSCANG00000035535-10065.868Colobus_angolensis_palliatus
ENSDARG00000100114sf3a310091.408ENSCGRG00001011320Sf3a310090.818Cricetulus_griseus_chok1gshd
ENSDARG00000100114sf3a310091.408ENSCGRG00000012156Sf3a310090.818Cricetulus_griseus_crigri
ENSDARG00000100114sf3a310093.556ENSCSEG00000010401sf3a310093.014Cynoglossus_semilaevis
ENSDARG00000100114sf3a310091.885ENSCVAG00000010239sf3a39591.471Cyprinodon_variegatus
ENSDARG00000100114sf3a39190.810ENSDNOG00000046628SF3A39990.810Dasypus_novemcinctus
ENSDARG00000100114sf3a310091.885ENSDORG00000008798Sf3a310091.218Dipodomys_ordii
ENSDARG00000100114sf3a310066.981FBgn0014366noi10064.229Drosophila_melanogaster
ENSDARG00000100114sf3a310079.810ENSEBUG00000015411sf3a39279.125Eptatretus_burgeri
ENSDARG00000100114sf3a310091.647ENSEASG00005012906SF3A310091.018Equus_asinus_asinus
ENSDARG00000100114sf3a310091.647ENSECAG00000017333SF3A310091.018Equus_caballus
ENSDARG00000100114sf3a310091.647ENSELUG00000010024sf3a310091.018Esox_lucius
ENSDARG00000100114sf3a310091.647ENSFCAG00000027772SF3A310091.018Felis_catus
ENSDARG00000100114sf3a310092.124ENSFALG00000001003SF3A310091.018Ficedula_albicollis
ENSDARG00000100114sf3a310091.885ENSFDAG00000020908SF3A310091.218Fukomys_damarensis
ENSDARG00000100114sf3a310092.363ENSFHEG00000019107sf3a310092.016Fundulus_heteroclitus
ENSDARG00000100114sf3a310092.124ENSGMOG00000015540sf3a310092.016Gadus_morhua
ENSDARG00000100114sf3a310092.363ENSGALG00000001540SF3A310091.218Gallus_gallus
ENSDARG00000100114sf3a310093.556ENSGAFG00000002320sf3a310092.615Gambusia_affinis
ENSDARG00000100114sf3a310093.795ENSGACG00000007842sf3a310093.413Gasterosteus_aculeatus
ENSDARG00000100114sf3a310091.408ENSGAGG00000014980SF3A310090.220Gopherus_agassizii
ENSDARG00000100114sf3a310070.459ENSGGOG00000022611-10070.459Gorilla_gorilla
ENSDARG00000100114sf3a310091.885ENSGGOG00000013928SF3A310091.218Gorilla_gorilla
ENSDARG00000100114sf3a310094.033ENSHBUG00000018158sf3a310093.860Haplochromis_burtoni
ENSDARG00000100114sf3a310091.885ENSHGLG00000012502SF3A310091.218Heterocephalus_glaber_female
ENSDARG00000100114sf3a310091.885ENSHGLG00100010546SF3A310091.218Heterocephalus_glaber_male
ENSDARG00000100114sf3a310091.885ENSHCOG00000015109sf3a310090.818Hippocampus_comes
ENSDARG00000100114sf3a310094.749ENSIPUG00000011603sf3a310093.812Ictalurus_punctatus
ENSDARG00000100114sf3a310091.647ENSSTOG00000001691SF3A310091.018Ictidomys_tridecemlineatus
ENSDARG00000100114sf3a310091.647ENSJJAG00000012404Sf3a310091.018Jaculus_jaculus
ENSDARG00000100114sf3a310093.556ENSKMAG00000007632sf3a310093.014Kryptolebias_marmoratus
ENSDARG00000100114sf3a310085.259ENSLBEG00000000816sf3a310085.259Labrus_bergylta
ENSDARG00000100114sf3a310093.556ENSLOCG00000003273sf3a310093.413Lepisosteus_oculatus
ENSDARG00000100114sf3a310079.441ENSLAFG00000008094SF3A310079.441Loxodonta_africana
ENSDARG00000100114sf3a310091.885ENSMFAG00000043047SF3A310091.218Macaca_fascicularis
ENSDARG00000100114sf3a39472.921ENSMFAG00000036706-10074.840Macaca_fascicularis
ENSDARG00000100114sf3a310091.885ENSMMUG00000023199SF3A310091.218Macaca_mulatta
ENSDARG00000100114sf3a310071.657ENSMMUG00000038820-10073.253Macaca_mulatta
ENSDARG00000100114sf3a39471.429ENSMNEG00000028686-10073.348Macaca_nemestrina
ENSDARG00000100114sf3a310091.885ENSMNEG00000044291SF3A310091.218Macaca_nemestrina
ENSDARG00000100114sf3a310091.885ENSMLEG00000030641SF3A310091.218Mandrillus_leucophaeus
ENSDARG00000100114sf3a310075.895ENSMLEG00000036714-10077.246Mandrillus_leucophaeus
ENSDARG00000100114sf3a310067.928ENSMLEG00000028631-10068.327Mandrillus_leucophaeus
ENSDARG00000100114sf3a310094.272ENSMAMG00000001942sf3a310093.413Mastacembelus_armatus
ENSDARG00000100114sf3a310094.033ENSMZEG00005016987sf3a310093.613Maylandia_zebra
ENSDARG00000100114sf3a310092.363ENSMGAG00000002875SF3A310086.680Meleagris_gallopavo
ENSDARG00000100114sf3a39188.428ENSMICG00000026541-10088.428Microcebus_murinus
ENSDARG00000100114sf3a310086.826ENSMICG00000001485-10086.826Microcebus_murinus
ENSDARG00000100114sf3a310085.230ENSMICG00000043548-10085.230Microcebus_murinus
ENSDARG00000100114sf3a310084.964ENSMOCG00000014565-9783.789Microtus_ochrogaster
ENSDARG00000100114sf3a310087.425ENSMOCG00000019939-10087.425Microtus_ochrogaster
ENSDARG00000100114sf3a310093.795ENSMMOG00000014307sf3a310093.214Mola_mola
ENSDARG00000100114sf3a310071.262ENSMODG00000017729-10070.463Monodelphis_domestica
ENSDARG00000100114sf3a310085.442ENSMODG00000024045-10083.832Monodelphis_domestica
ENSDARG00000100114sf3a310094.033ENSMALG00000004836sf3a310093.421Monopterus_albus
ENSDARG00000100114sf3a310091.408MGP_CAROLIEiJ_G0026449Sf3a310090.818Mus_caroli
ENSDARG00000100114sf3a310091.408ENSMUSG00000028902Sf3a310090.818Mus_musculus
ENSDARG00000100114sf3a310085.828MGP_PahariEiJ_G0028780Sf3a310085.828Mus_pahari
ENSDARG00000100114sf3a310091.408MGP_SPRETEiJ_G0027428Sf3a310090.818Mus_spretus
ENSDARG00000100114sf3a310091.169ENSMLUG00000000991SF3A310090.619Myotis_lucifugus
ENSDARG00000100114sf3a310085.230ENSNGAG00000018032Sf3a310085.230Nannospalax_galili
ENSDARG00000100114sf3a310083.234ENSNLEG00000011720SF3A310083.234Nomascus_leucogenys
ENSDARG00000100114sf3a310091.885ENSOPRG00000012785SF3A310091.218Ochotona_princeps
ENSDARG00000100114sf3a310079.840ENSODEG00000018393-10079.641Octodon_degus
ENSDARG00000100114sf3a310077.857ENSODEG00000000937-10079.482Octodon_degus
ENSDARG00000100114sf3a310088.305ENSODEG00000006854-10088.224Octodon_degus
ENSDARG00000100114sf3a310086.627ENSODEG00000007470-10086.627Octodon_degus
ENSDARG00000100114sf3a310094.033ENSONIG00000010296sf3a310093.793Oreochromis_niloticus
ENSDARG00000100114sf3a310090.692ENSOANG00000002473SF3A310090.192Ornithorhynchus_anatinus
ENSDARG00000100114sf3a310091.885ENSOCUG00000005407SF3A310091.218Oryctolagus_cuniculus
ENSDARG00000100114sf3a310092.601ENSORLG00000008175sf3a310092.216Oryzias_latipes
ENSDARG00000100114sf3a310092.363ENSORLG00020013708sf3a310092.016Oryzias_latipes_hni
ENSDARG00000100114sf3a310092.363ENSORLG00015004104sf3a310092.016Oryzias_latipes_hsok
ENSDARG00000100114sf3a310092.840ENSOMEG00000020177sf3a310092.415Oryzias_melastigma
ENSDARG00000100114sf3a310091.647ENSOARG00000019950SF3A310091.018Ovis_aries
ENSDARG00000100114sf3a310091.885ENSPPAG00000034066SF3A310091.218Pan_paniscus
ENSDARG00000100114sf3a310070.060ENSPPAG00000039955-10070.060Pan_paniscus
ENSDARG00000100114sf3a310091.647ENSPPRG00000001258SF3A310091.018Panthera_pardus
ENSDARG00000100114sf3a310091.647ENSPTIG00000007515SF3A310091.018Panthera_tigris_altaica
ENSDARG00000100114sf3a310071.058ENSPTRG00000046013-10071.058Pan_troglodytes
ENSDARG00000100114sf3a310091.885ENSPTRG00000000559SF3A310091.218Pan_troglodytes
ENSDARG00000100114sf3a310078.244ENSPANG00000029393-10079.840Papio_anubis
ENSDARG00000100114sf3a310068.064ENSPANG00000031214-10067.066Papio_anubis
ENSDARG00000100114sf3a310091.885ENSPANG00000021859SF3A310091.218Papio_anubis
ENSDARG00000100114sf3a310094.749ENSPKIG00000004719sf3a310093.413Paramormyrops_kingsleyae
ENSDARG00000100114sf3a310089.311ENSPSIG00000004273SF3A310088.270Pelodiscus_sinensis
ENSDARG00000100114sf3a39191.685ENSPMGG00000003610sf3a39491.685Periophthalmus_magnuspinnatus
ENSDARG00000100114sf3a310091.408ENSPEMG00000020805Sf3a310090.818Peromyscus_maniculatus_bairdii
ENSDARG00000100114sf3a35476.667ENSPMAG00000001044sf3a39876.667Petromyzon_marinus
ENSDARG00000100114sf3a310091.408ENSPCIG00000025719SF3A310090.419Phascolarctos_cinereus
ENSDARG00000100114sf3a310093.317ENSPFOG00000005284sf3a310092.415Poecilia_formosa
ENSDARG00000100114sf3a39989.398ENSPLAG00000003979sf3a39289.135Poecilia_latipinna
ENSDARG00000100114sf3a37491.318ENSPMEG00000021132sf3a38887.023Poecilia_mexicana
ENSDARG00000100114sf3a310093.556ENSPREG00000013802sf3a310092.615Poecilia_reticulata
ENSDARG00000100114sf3a310089.021ENSPPYG00000001519SF3A310088.822Pongo_abelii
ENSDARG00000100114sf3a310085.203ENSPCAG00000010734SF3A310084.431Procavia_capensis
ENSDARG00000100114sf3a310080.357ENSPCOG00000020389-10080.357Propithecus_coquereli
ENSDARG00000100114sf3a310075.449ENSPCOG00000017131-10075.449Propithecus_coquereli
ENSDARG00000100114sf3a310079.242ENSPVAG00000010158SF3A310079.242Pteropus_vampyrus
ENSDARG00000100114sf3a310094.033ENSPNYG00000000786sf3a310093.613Pundamilia_nyererei
ENSDARG00000100114sf3a310095.704ENSPNAG00000010298sf3a310095.010Pygocentrus_nattereri
ENSDARG00000100114sf3a310091.408ENSRNOG00000007629Sf3a310090.818Rattus_norvegicus
ENSDARG00000100114sf3a310068.663ENSRBIG00000041123-10068.862Rhinopithecus_bieti
ENSDARG00000100114sf3a310069.212ENSRBIG00000043833-10067.465Rhinopithecus_bieti
ENSDARG00000100114sf3a310091.885ENSRBIG00000043567SF3A310091.218Rhinopithecus_bieti
ENSDARG00000100114sf3a310091.885ENSRROG00000033888SF3A310091.218Rhinopithecus_roxellana
ENSDARG00000100114sf3a39472.495ENSRROG00000032346-10072.708Rhinopithecus_roxellana
ENSDARG00000100114sf3a38989.109ENSSBOG00000032688SF3A310089.109Saimiri_boliviensis_boliviensis
ENSDARG00000100114sf3a310066.667ENSSBOG00000026932-10066.068Saimiri_boliviensis_boliviensis
ENSDARG00000100114sf3a310091.408ENSSHAG00000014530SF3A310090.949Sarcophilus_harrisii
ENSDARG00000100114sf3a310094.988ENSSFOG00015005975sf3a310094.810Scleropages_formosus
ENSDARG00000100114sf3a310094.033ENSSMAG00000020213sf3a310093.214Scophthalmus_maximus
ENSDARG00000100114sf3a310093.079ENSSDUG00000011590sf3a310089.820Seriola_dumerili
ENSDARG00000100114sf3a310094.033ENSSLDG00000020635sf3a310093.613Seriola_lalandi_dorsalis
ENSDARG00000100114sf3a310092.124ENSSPUG00000004010SF3A310090.818Sphenodon_punctatus
ENSDARG00000100114sf3a310093.795ENSSPAG00000018653sf3a310093.214Stegastes_partitus
ENSDARG00000100114sf3a310091.647ENSSSCG00000003643SF3A310091.018Sus_scrofa
ENSDARG00000100114sf3a310092.363ENSTGUG00000001466SF3A310091.743Taeniopygia_guttata
ENSDARG00000100114sf3a310092.601ENSTRUG00000009089sf3a310092.216Takifugu_rubripes
ENSDARG00000100114sf3a310092.162ENSTNIG00000009800sf3a310091.650Tetraodon_nigroviridis
ENSDARG00000100114sf3a310079.641ENSTBEG00000007614SF3A310079.641Tupaia_belangeri
ENSDARG00000100114sf3a310091.408ENSTTRG00000013519SF3A310090.818Tursiops_truncatus
ENSDARG00000100114sf3a310091.647ENSUAMG00000006134SF3A310091.018Ursus_americanus
ENSDARG00000100114sf3a310091.647ENSUMAG00000021250SF3A310091.018Ursus_maritimus
ENSDARG00000100114sf3a37193.023ENSVPAG00000004778SF3A37393.023Vicugna_pacos
ENSDARG00000100114sf3a310087.351ENSVVUG00000022908SF3A310087.226Vulpes_vulpes
ENSDARG00000100114sf3a310090.931ENSXETG00000022923sf3a310089.421Xenopus_tropicalis
ENSDARG00000100114sf3a310093.317ENSXMAG00000017165sf3a310092.415Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome-IEAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005681spliceosomal complex21873635.IBAComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0008270zinc ion binding-IEAFunction
GO:0060218hematopoietic stem cell differentiation19332767.IMPProcess

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